iiinova — where your digital self keeps evolving

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Mizrahi Lab @mizrahilab.bsky.social · 03/12/2025

With sincere appreciation to the @erc.europa.eu, @3domics.bsky.social & HoloRuminant for their support, which enabled this study to come to life.

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3D'omics @3domics.bsky.social · 13/11/2025

The 𝟯𝗿𝗱 𝗖𝗼𝗽𝗲𝗻𝗵𝗮𝗴𝗲𝗻 𝗚𝘂𝘁 𝗠𝗶𝗰𝗿𝗼𝗯𝗶𝗼𝗺𝗲 𝗛𝘂𝗯 𝗦𝘆𝗺𝗽𝗼𝘀𝗶𝘂𝗺 was yesterday and 3D’omics was not only there in large numbers, but also received the poster prize! Huge congratulations to Amalia Bogri 🎉🥳 Her fantastic poster impressed the judges and informed the audience about the exciting research we are doing!

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3D'omics @3domics.bsky.social · 27/10/2025

🚨 More news today! We are excited to share our new video 📽️ presenting the *challenges and solutions* of the last 4 years! Check it out on youtube! www.youtube.com/watch?v=RWeq...

youtube.com

3D'omics - Challenges and Solutions

YouTube video by 3D'omics

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3D'omics @3domics.bsky.social · 27/10/2025

🚨 New preprint alert! 🚨 3D'omics introduces #Micro-scale #spatial #metagenomics — a method to reveal the high-resolution spatial biogeography of gut microbiomes. 🧵👇 www.biorxiv.org/content/10.1...

biorxiv.org

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3D'omics @3domics.bsky.social · 30/09/2025

Did you know that #3Domics had their last in-person meeting last week? We were in beautiful Leuven, discussing the final steps of the project. So good to see so many familiar faces! Excited to share more results soon!

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3D'omics @3domics.bsky.social · 30/07/2025

Do you know the EU results packs? They provide excellent summaries of topics, such as "Microbiomes and holobiomes as drivers of a sustainable circular bioeconomy". 🦠 @3domics.bsky.social was featured this month! 🔥 Check it out cordis.europa.eu/article/id/4... (foto credit: Bryan Wang)

cordis.europa.eu

Zooming in on microbial life

A pioneering technology that identifies where microbes live and what they do inside the body could change how we understand their role in...

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3D'omics @3domics.bsky.social · 29/07/2025

Enjoying your summer break? ☀️ @3domics.bsky.social is working hard 👩‍💻 to provide you with exciting 🦠🔬 research once you're back 🏝️. We are now starting into the hot phase of the last 5 months of the project 🔥🔥🔥 www.3domics.eu

3domics.eu

Home

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3D'omics @3domics.bsky.social · 03/06/2025

Are you here for the microbes? Listen to this fun podcast!

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3D'omics @3domics.bsky.social · 26/05/2025

You might already know our amazing explainer video created by the talented team at @madeclear.bsky.social — if not, check it out here: www.youtube.com/watch?v=Lo75... We are excited to share that our second video is now in production and launching this summer!

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3D'omics @3domics.bsky.social · 16/05/2025

And just like that the #MicrobiomeAtlas course is over. Thank you all for an amazing week and 5 excellent presentations today! #SpatialMicrobiology #3Domics

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3D'omics @3domics.bsky.social · 15/05/2025

Another productive day at the #MicrobiomeAtlas course—so much learning and discovery! Can’t wait to hear from the participants tomorrow. Time is just flying by! #3Domics

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3D'omics @3domics.bsky.social · 14/05/2025

Today’s bioinformatics session of the #MicrobiomeAtlas course was held with a beautiful view over #Copenhagen 🤩 #3Domics #ScienceWithAView

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3D'omics @3domics.bsky.social · 13/05/2025

Day 2 of the #MicrobiomeAtlas course! Yesterday we got to know each other, enjoyed some games and pizza. Today we dove into the labs for hands-on technique learning! Excited for what’s to come! #3Domics #ScienceInAction #LabDay

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3D'omics @3domics.bsky.social · 05/05/2025

#Spatial #Microbiomics course starting in one week! We are so excited to show the world what 3D'omics is working with! If you are interested & in Copenhagen, consider joining. 2 last-minute spots just opened up!

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3D'omics @3domics.bsky.social · 11/04/2025

📢 Did you see the first OA #publication of 3D'omics yet?! First author Victoria Drauch & colleagues have published their results on differential effects of synbiotic delivery routes in chicken challenged with Salmonella infections! Read the full study here! www.sciencedirect.com/science/arti...

sciencedirect.com

Differential effects of synbiotic delivery route (feed, water, combined) in broilers challenged with Salmonella Infantis

Salmonella enterica subsp. enterica serovar Infantis (S. Infantis) presents a persistent and multi-drug-resistant threat to poultry production, highli…

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Haris Zafeiropoulos @hariszaf.bsky.social · 08/04/2025

Hi #microbiome community. If you are interested in microbial networks, feel free to have a look and register in our summer school! Two days with talks and hands-on on how to annotate your networks and come up with testable hypotheses. 24 and 25 Sep 2025, Leuven , Belgium @3domics.bsky.social

msysbiology.com

Summer School on Data integration with Microbial Networks and Community Models

Bootstrap 5 Tech Conference Template

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Center for Evolutionary Hologenomics @hologenomics.bsky.social · 31/03/2025

🧀What do cheese, sourdough, & yogurt have in common? #Microbes!🦠 🎧Listen to postdoc Veronica Sinotte in this episode of our podcast #MicrobialConnections as she explains how #FermentedFood is actually "controlled rot" & how it might have evolved💡 microbial-connections.simplecast.com/episodes/fer...

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3D'omics @3domics.bsky.social · 04/03/2025

Interested in #Food #system #innovations and #climate #change? Attend our seminar "#microbial game-changers": we will be exploring how microorganisms are driving innovation in sustainable food production and climate solutions. 7 April - 9am-4pm - Litteraturhuset i Oslo www.nmbu.no/en/research/...

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3D'omics @3domics.bsky.social · 17/02/2025

*Deadline extended!* Last chance to join our free workshop on #Spatial #Microbiomics on 12-16 May in #Copenhagen at the Center for Evolutionary Hologenomics. Ideal for PhDs, postdocs & other microbiome enthusiasts. www.3domics.eu/TrainingEven... Please share!

3domics.eu

Microbiome Atlas

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3D'omics @3domics.bsky.social · 12/02/2025

Only 4 days left! Register now! Free workshop on #Spatial #Microbiomics – From Sampling to Analysis" Join us in May in #Copenhagen at the Center for Evolutionary Hologenomics. Ideal for PhDs, postdocs & other microbiome enthusiasts. www.3domics.eu/TrainingEven... Please share!

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3D'omics @3domics.bsky.social · 03/02/2025

Deadline approaching! Free workshop on #Spatial #Microbiomics – From Sampling to Analysis" Join us in May in #Copenhagen at @hologenomics.bsky.social Ideal for PhDs, postdocs & other microbiome enthusiasts. Register until February 16th: www.3domics.eu/TrainingEven... Please share!

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Center for Evolutionary Hologenomics @hologenomics.bsky.social · 07/01/2025

📢Don't miss out on a great opportunity to join a #free exciting workshop on #Spatial #Microbiomics - From #Sampling to #Analysis in May 2025 here @hologenomics.bsky.social in Copenhagen!🦠 The workshop is arranged by @3domics.bsky.social! @dg.dk, @holobiontbiology.bsky.social, @hologen.bsky.social

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3D'omics @3domics.bsky.social · 07/01/2025

Join us in May in #Copenhagen at @hologenomics.bsky.social for an exciting #workshop on #microbiomics! "Spatial #Microbiomics – From Sampling to Analysis" 📷May 2025. Ideal for PhDs, postdocs & other microbiome enthusiasts. Register until February 16th: 3domics.eu/TrainingEven... Please re-post!

3domics.eu

Microbiome Atlas

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3D'omics @3domics.bsky.social · 17/12/2024

Looking for something exciting to learn next year? 📣 Join the 3D'omics Workshop: "Spatial Microbiomics – From Sampling to Analysis" 📅 May 12-16, 2025,📍Copenhagen, DK Ideal for PhDs, postdocs & other microbiome enthusiasts! 🔗 Register now: www.3domics.eu/TrainingEven... #Microbiome #Workshop

3domics.eu

Microbiome Atlas

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3D'omics @3domics.bsky.social · 26/11/2024

🐾New insights into #hologenomics! Raphael Eisenhofer et al. explore the complex relationship between #wild #vertebrates and their #microbiomes🦠 The study suggests how to generate robust and efficient hologenomic data from wild vertebrates 👇 ceh.ku.dk/news/2024/ne...

ceh.ku.dk

New insights into hologenomics research in wild vertebrates

In a new technical paper just published in Methods in Ecology and Evolution, researchers highlight the potential of hologenomics to deepen our understanding of biological systems from a host-microbiot...

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Christoph Kaleta @kaletalab.bsky.social · 25/11/2024

👇Three days left to apply👇

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3D'omics @3domics.bsky.social · 25/11/2024

Today @3domics.bsky.social is at the 2nd CPH Gut #Microbiome Symposium! Looking forward to an exciting and stimulating day! 🤓 Yay for the microbiome!🙌 cphgut.ku.dk

cphgut.ku.dk

Copenhagen Gut Microbiome Hub – University of Copenhagen

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Georgios (Yorgos) Marinos @maringos.bsky.social · 22/11/2024

Proudly presenting Virtual Colon, our modelling software for host-microbial metabolic spatiotemporal interactions in the mammalian large intestine, during the Kiel Life Sciences Retreat 2024, in Schleswig, Germany. Thanks to all the participants and to @kaletalab.bsky.social & @kamoors.bsky.social!

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3D'omics @3domics.bsky.social · 24/04/2024

#Tasting #Holobionts is getting ready for tonight. 🥳 Co-organised by #3Domics, the event features fantastic speakers on fermented and future foods. 😋

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3D'omics @3domics.bsky.social · 02/10/2024

Time flies. The 5th 3D’omics Assembly is already coming to an end. What a packed event. 🤩 3 days are just not enough ⏱️to talk about all of 3D’omics’ exciting results. See you all again soon!

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3D'omics @3domics.bsky.social · 01/10/2024

What is the #EcoGen cluster? We've just launched our first video, introducing our work & goals as we work together for a more sustainable European livestock sector! 🇪🇺 Watch the video now 👉 bit.ly/3TPLfSg Find out more about EcoGen 👉 bit.ly/3TStSQF

bit.ly

YouTube

Share your videos with friends, family, and the world

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3D'omics @3domics.bsky.social · 30/09/2024

3D’omics is BACK! We have just assembled in beautiful Vienna to share our progress. It’s so good to see all these friendly faces again!

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Kostas Kormas 🐟🦞🐚🦭💩🔬🧪🧬📝 ✈️ 🏳️‍🌈 @kkormas.bsky.social · 01/07/2024

It was about time to start thinking about issues/actions related to #microbiome scientists towards state authorities, politicians etc. and this is what we discuss now at #AHC2024 @hologenomics.bsky.social @mikrobiokosmos.bsky.social @hosmic.bsky.social @3domics.bsky.social

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Kostas Kormas 🐟🦞🐚🦭💩🔬🧪🧬📝 ✈️ 🏳️‍🌈 @kkormas.bsky.social · 01/07/2024

When referring to plant-microbes interactions, never forget (or underestimate) the #microalgae! Lone Gram explains everything about this in #AHC2024 @hologenomics.bsky.social @mikrobiokosmos.bsky.social @hosmic.bsky.social @3domics.bsky.social

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3D'omics @3domics.bsky.social · 08/05/2024

Come and watch #3Domics coordinator Antton Alberdi talk at #FSM24 about the stunning complexity of the microbiome and how we can investigate it at different scales. 📣 Exciting insights are a promise!

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3D'omics @3domics.bsky.social · 24/04/2024

#Tasting #Holobionts is getting ready for tonight. 🥳 Co-organised by #3Domics, the event features fantastic speakers on fermented and future foods. 😋

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Center for Evolutionary Hologenomics @hologenomics.bsky.social · 03/04/2024

Save the date! #Tasting #Holobionts is an event where researchers and the public will delve into how #microbes shape an essential part of our lives - our #food - from #fish to #ferments. April 24 18.30-21 @hologenomics.bsky.social will host this Forskningens Døgn event! forsk.dk/arrangorprof...

forsk.dk

Smag holobionter: Mikroorganismers evne til at skabe bæredygtig og fermenteret mad

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3D'omics @3domics.bsky.social · 11/03/2024

A new 'toy' was delivered today 🤩 A #DreamPrep come true. 3D'omics can start mass production soon! Exciting results ahead 📈

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One Health Microbiome Center @psumbiome.bsky.social · 08/02/2024

🗓️Remember to mark your calenders for One Health Microbiome Symposium, taking place May 30-31st! This year's symposium will feature @edithhammer.bsky.social from Lund University, giving an illuminating talk on #soil #microbes. 🦠🍄🪴 Link to register: www.eventbrite.com/e/one-health...

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Dr Mark D. Scherz @markscherz.bsky.social · 31/01/2024

The Natural History Museum of Denmark is looking for a new Head of Collections! Could you be the person to lead our transition to new buildings, and development of and moving to a new collections facility to house 80% of our 14 million objects‽ employment.ku.dk/staff/?show=...

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3D'omics @3domics.bsky.social · 08/12/2023

3D'omics coordiantor Antton Alberdi spoke at the #FOOD2030 meeting in Brussels this week! Focusing on "Thinking out of the box". #FOOD2030 is the EU's approach at supporting the transition towards sustainable, healthy and inclusive food systems, that respect planetary boundaries.

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3D'omics @3domics.bsky.social · 13/11/2023

Tomorrow, the 3D'omics consortium will get together to discuss our publication strategy! So many cool results coming your way!

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Center for Evolutionary Hologenomics @hologenomics.bsky.social · 08/11/2023

📣🦠🧬Want to hear about the latests trends in #microbe-#host interactions of plants, animals & humans? And how the applied aspects of #hologenomics #research can improve our future? Then sign up for the free Applied Hologenomics Conference 2024 in Copenhagen #AHC2024 appliedhologenomicsconference.eu

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