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Zampieri Lab

@zampierilab.bsky.social
196 followers 190 following 35 posts

Systems Pharmacology and Biology Lab at @DepBiomedicine, University of Basel, Switzerland. We exploit metabolic weaknesses for therapeutic applications. www.zampierilab.org

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Zampieri Lab @zampierilab.bsky.social · 08/09/2026
We welcome a new lab member: Mario Raspanti. During his internship, Mario will be working on the implementation of 3D culture models as the foundation for all subsequent drug profiling and mechanistic analyses.
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Zampieri Lab @zampierilab.bsky.social · 17/08/2026
In today’s journal club, we discussed a paper in Nature entitled “Targeting de novo purine biosynthesis for tuberculosis treatment”. Great discussion on antimicrobial discovery approaches and drug characterisation. Link: www.nature.com/articles/s41...
nature.com
Targeting de novo purine biosynthesis for tuberculosis treatment - Nature
The validation of inhibitors targeting PurF, a novel drug target for tuberculosis drug discovery, is described.
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Zampieri Lab @zampierilab.bsky.social · 03/07/2026
Welcome back, Dana Reddmann! Previously doing her Master's Thesis with us, she is now on board as a PhD student in our lab. Dana will investigate how genetic and environmental factors contribute to the non-random spread of metastasising tumour cells.
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Zampieri Lab @zampierilab.bsky.social · 03/07/2026
Welcome, Federico Oreglia, as a new PhD student in our lab! Federico will be focussing on understanding how metabolic mechanisms influence the colonization potential of lung cancer cells.
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Zampieri Lab @zampierilab.bsky.social · 04/06/2026
Welcome, Tuomas Lindeman, as a new PhD student in our lab! Tuomas will be working fast targeted LC-MS/MS methods to expand our analytical portfolio for large clinical sample cohorts.
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Zampieri Lab @zampierilab.bsky.social · 15/04/2026
Welcome, Kevin Ritter, as a new PostDoc in our lab! He will be working on establishing in vitro frameworks to study metabolic reactions in defined biological extracts. With his background in organic chemistry, he will also reinforce our analytical expertise and help us set up our LC/MS workflow.
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Zampieri Lab @zampierilab.bsky.social · 13/04/2026
In today's journal club, we discussed a recent contribution from Michael Zimmermann's group @embl.org, Heidelberg, available on bioRxiv. Neat work illustrating the potential of individual members of the gut microbiome in drug-prodrug transformation impacting PK. www.biorxiv.org/content/10.6...
biorxiv.org
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Zampieri Lab @zampierilab.bsky.social · 25/03/2026
We are looking for an enthusiastic intern (100%) to work on extending our high-throughput metabolic fingerprinting platform into 3D cancer models, such as spheroids and organoids. Please apply here: jobs.unibas.ch/offene-stell...
jobs.unibas.ch
Universität Basel: Internship Opportunity (100%) Zampieri Lab
The Department of Biomedicine is a joint effort between the University of Basel and the University Hospitals Basel. It unites basic and clinical scientists to advance our understanding of health and d...
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Zampieri Lab @zampierilab.bsky.social · 03/03/2026
We discussed in our past journal club how Benztropine, a Parkinson’s drug, limits intracellular mycobacterium tuberculosis growth by modulating host histamine receptor H1, highlighting histamine signalling as a host-directed target. www.nature.com/articles/s44...
nature.com
The Parkinson’s drug benztropine possesses histamine receptor 1-dependent host-directed antimicrobial activity against Mycobacterium tuberculosis - npj Antimicrobials and Resistance
npj Antimicrobials and Resistance - The Parkinson’s drug benztropine possesses histamine receptor 1-dependent host-directed antimicrobial activity against Mycobacterium tuberculosis
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Zampieri Lab @zampierilab.bsky.social · 18/02/2026
The Zampieri Lab at the University of Basel is recruiting a highly motivated PhD candidate to investigate how metabolic programs drive cancer metastasis. 📩 Only applications submitted through the official recruiting system of the University of Basel will be considered. jobs.unibas.ch/offene-stell...
jobs.unibas.ch
Universität Basel: PhD position in systems biology (Zampieri Lab)
The Department of Biomedicine is a joint effort between the University of Basel and the University Hospitals Basel. It unites basic and clinical scientists to advance our understanding of health and d...
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Zampieri Lab @zampierilab.bsky.social · 19/12/2025
We have multiple open positions in our lab (www.zampierilab.org). Interested candidates should apply through the University of Basel’s official recruitment portal: www.unibas.ch/en/Working-a...
zampierilab.org
Home - Zampieri Lab
By studying fundamental mechanisms regulating short- and long-term metabolic adaptation to genetic and chemical perturbations, our lab aims at finding new and unconventional therapeutic strategies, fr...
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Zampieri Lab @zampierilab.bsky.social · 19/12/2025
🎉 We’re excited to announce that Laurentz has been awarded the Research Fund for Excellent Junior Researchers 2025 of the University of Basel. As part of this project, we are now looking for a motivated intern: jobs.unibas.ch/offene-stell...
jobs.unibas.ch
Universität Basel: Internship Opportunity (100%) Zampieri Lab
The Department of Biomedicine is a joint effort between the University of Basel and the University Hospitals Basel. It unites basic and clinical scientists to advance our understanding of health and d...
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Zampieri Lab @zampierilab.bsky.social · 12/12/2025
After our hike up the hills in Pratteln, we had a lovely evening out at Wystübli Leuengrund, enjoying a lot of 🧀 fondue and local wine 🥂.
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Zampieri Lab @zampierilab.bsky.social · 04/12/2025
Impressive and interesting talks this week from our lab at the DBM monthly seminar series! Sebastian Bors and Tobias Fuhrer presented their projects and preliminary results, illustrating our lab's efforts to combine large screens with cell culture and high-throughput metabolomics.
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Zampieri Lab @zampierilab.bsky.social · 21/10/2025
In this week’s journal club, we discussed how sugar-sweetened beverages - America’s sweetest legacy - may drive colorectal cancer metastasis. Glucose + fructose relieve CRC cells from NAD+ limitation through SORD to boost metastasis. www.nature.com/articles/s42...
nature.com
Fructose and glucose from sugary drinks enhance colorectal cancer metastasis via SORD - Nature Metabolism
Feng, Luo and colleagues show that the combination of glucose and fructose, as found in sugar-sweetened beverages, promotes colorectal cancer metastasis through a mechanism involving sorbitol dehydrog...
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Zampieri Lab @zampierilab.bsky.social · 29/09/2025
In our recent journal club, we discussed an impressive paper published in Nature Microbiology titled “A shared alarmone–GTP switch controls persister formation in bacteria”. A comprehensive work on a (p)ppGpp–GTP antagonism pathway! Check it out: doi.org/10.1038/s415...
doi.org
A shared alarmone–GTP switch controls persister formation in bacteria - Nature Microbiology
Alarmone synthesis depletes GTP levels leading to a GTP-dependent switch that controls triggered, spontaneous and antibiotic-induced persister formation in Bacillus subtilis.
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Zampieri Lab @zampierilab.bsky.social · 02/09/2025
We are happy to welcome Charleen Braun, doing her Master’s degree in Bioanalytics at Coburg University of Applied Sciences with a specialization in Human Biology.
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Zampieri Lab @zampierilab.bsky.social · 21/08/2025
At our annual Summer Symposium, Laurentz Schuhknecht from our Lab received this year’s DBM Research Prize, for his groundbreaking work in drug discovery and systems pharmacology, published in Nature Biotechnology (Nature Portfolio) earlier this year. biomedizin.unibas.ch/en/communica...
biomedizin.unibas.ch
DBM Research Prize Winner 2024 / 2025
Congratulations to this year’s DBM research prize winner! As we enjoy our annual summer symposium, we would like to recognize Dr. Laurentz Schuhknecht from Mattia Zampieri’s Systems Pharmacology and B...
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Zampieri Lab @zampierilab.bsky.social · 21/07/2025
In our today's journal club, we discussed this impressive work by the Ralser Lab appearing this month in Nature: www.nature.com/articles/s41...
nature.com
The role of metabolism in shaping enzyme structures over 400 million years - Nature
By combining structural biology and evolutionary genomics analyses, the evolution of enzymes over 400 million years is shown to be governed by catalytic function, metabolic network architecture, cost ...
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Zampieri Lab @zampierilab.bsky.social · 01/07/2025
In our recent journal club, we discussed insights obtained by in vivo NMR in the context of antibiotic resistance. Check it out! pubs.rsc.org/en/content/a...
pubs.rsc.org
In-cell NMR reveals metabolic adaptations in central carbon pathways driving antibiotic tolerance in Salmonella Typhimurium
Antibiotic tolerance presents a significant challenge in eradicating bacterial infections, as tolerant strains can survive antibiotic treatment, contributing to the recurrence of infections and the de...
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Zampieri Lab @zampierilab.bsky.social · 12/06/2025
We are happy to welcome Sandra Pflästerer, doing her Master’s degree in Molecular and Cellular Biology at Ludwig-Maximilian University.
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Zampieri Lab @zampierilab.bsky.social · 27/05/2025
In our recent journal club, we discussed a nice publication from Nature: “Macrophages recycle phagocytosed bacteria to fuel immunometabolic responses”. These exciting findings open the door to approaches that regulate immunometabolism during bacterial infections. www.nature.com/articles/s41...
nature.com
Macrophages recycle phagocytosed bacteria to fuel immunometabolic responses - Nature
Phagocytosed bacteria can serve as an alternative nutrient source for macrophages, influencing their metabolic and immune responses through the recycling of microbial components, with the process regu...
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Zampieri Lab @zampierilab.bsky.social · 19/05/2025
We are looking for highly motivated Master and Bachelor Students to work on computational projects to better understand how bacteria and cancer cells metabolically adapt to chemical perturbations. Write us and find out how to conduct your semester or master project in our lab! www.zampierilab.org
zampierilab.org
Home - Zampieri Lab
By studying fundamental mechanisms regulating short- and long-term metabolic adaptation to genetic and chemical perturbations, our lab aims at finding new and unconventional therapeutic strategies, fr...
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Zampieri Lab @zampierilab.bsky.social · 13/05/2025
We are happy to share our new work on glutamine addiction in cancer cells. By characterizing the exchange rate and dynamic metabolite response to extracellular glutamine deprivation, we shed light on long standing questions about glutamine addiction. www.biorxiv.org/content/10.1...
biorxiv.org
The glutamine-aspartate metabolic tradeoff between fast growth and metabolic flexibility.
Cancer cells develop unique addictions to nutrients offering attractive opportunities for clinical intervention. However, how cancer cells orchestrate and benefit from metabolic rewiring remain fundam...
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Zampieri Lab @zampierilab.bsky.social · 07/04/2025
A warm welcome to Dana Reddmann, Biochemistry Master's student at Freie Universität Berlin, starting her Master Thesis in our lab!
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Zampieri Lab @zampierilab.bsky.social · 25/03/2025
We are happy to welcome Elena Pintea, MSc-Student in the Drug Sciences program at the University of Basel.
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Zampieri Lab @zampierilab.bsky.social · 10/03/2025
Our recent publication has been featured in The Scientist! Thanks to Sneha Khedkar for such a clear and exciting presentation of our research. www.the-scientist.com/same-drug-ne...
the-scientist.com
Same Drug, New Actions: Metabolomics Reveals Hidden Drug Effects
Studying drug-induced metabolic changes with high-throughput systems shed light on drug modes of action, providing an efficient drug discovery platform.
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Zampieri Lab @zampierilab.bsky.social · 03/03/2025
In today's journal club, we discussed the work by Sunil Guharajan, Vinuselvi Parisutham and Robert C. Brewster from @brewsterlab.bsky.social, which was recently published in Nucleic Acids Research. doi.org/10.1093/nar/...
doi.org
A systematic survey of TF function in E. coli suggests RNAP stabilization is a prevalent strategy for both repressors and activators
Abstract. Transcription factors (TFs) are often classified as activators or repressors, yet these context-dependent labels are inadequate to predict quanti
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Zampieri Lab @zampierilab.bsky.social · 03/03/2025
A warm welcome to Thomas Gosselin-Monplaisir, visiting PhD-Student from Toulouse Biotechnology Institute.
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Zampieri Lab @zampierilab.bsky.social · 12/02/2025
We are seeking for a talented semester or master student for a computational project on antimicrobial effects of drugs. Check it out! www.zampierilab.org/join-us/
zampierilab.org
Join us - Zampieri Lab
Interested to join our lab? Feel free to inquire about open positions or semester/master projects in our lab. We are always looking for highly motivated Master and Bachelor Students. We continuously o...
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Zampieri Lab @zampierilab.bsky.social · 05/02/2025
Our work was featured in chemistryworld. Fantastic pitch of our research by Anthony King. www.chemistryworld.com/news/mapping...
chemistryworld.com
Mapping metabolite disturbances by drugs
High-throughput metabolomic profiling gives insight into unpredictable drug effects
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Zampieri Lab @zampierilab.bsky.social · 03/02/2025
Today in our journal club: impressive work by the group of S.M. Fendt KU Leuven, published in Nature: www.nature.com/articles/s41... Here they present how elevated pulmonary aspartate levels trigger a translational program that boosts the aggressiveness of lung metastases.
nature.com
Aspartate signalling drives lung metastasis via alternative translation - Nature
Aspartate in the tumour environment activates the N-methyl-d-aspartate receptor in cancer cells to induce cellular programmes that increase the aggressiveness of metastasis.
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Zampieri Lab @zampierilab.bsky.social · 28/01/2025
We are very excited to share that the recent research from our lab has been published in Nature Biotechnology! Thanks to our lab members and our collaborators for contributing to this project and especially to Laurentz for driving this exciting research! www.nature.com/articles/s41...
nature.com
A human metabolic map of pharmacological perturbations reveals drug modes of action - Nature Biotechnology
Mapping the metabolic effects of drugs helps define their mode of action.
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Zampieri Lab @zampierilab.bsky.social · 28/11/2024
Today in our journal club: impressive work by Tofani et al. in Cell Metabolism. www.cell.com/cell-metabol...
cell.com
Gut microbiota regulates stress responsivity via the circadian system
Gut microbes are known to modulate stress responsivity and behavior. Tofani et al. demonstrate that such modulations occur via the circadian system. The oscillations in gut microbiota composition regu...
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Zampieri Lab @zampierilab.bsky.social · 28/11/2024
This is our new lab profile on @bsky.app ! Stay tuned for regular news and updates from our lab!
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