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Atlas of Variant Effects Alliance

@varianteffect.bsky.social
681 followers 237 following 243 posts

Advancing the promise of the Human Genome Project by interpreting the landscape of human genetic variation. www.varianteffect.org www.linkedin.com/company/atlas-of-v… #AtlasOfVariantEffects

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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 19h
Our next Variant Effects Seminar is tomorrow – October 6, when @marianomartin.bsky.social and Seulki Kwon will present their research. Discover this month's speakers and get joining instructions: www.varianteffect.org/seminar-seri... #DeepMutationalScanning #AtlasOfVariantEffects
The image shows the AVE DNA logo, the date and time of the VESS seminar (4-5 pm UTC, 6 October, 2026), the speakers' names  (Mariano Martin Gomez and Seulki Kwon), affiliations, photos and presentation titles. At the foot of the image is a QR code and URLs for more information and joining instructions.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 29/09/2026
Learn more about our next two Variant Effects Seminar speakers and their research. Mariano Martín Gomez and Seulki Kwon will present on October 6 (16.00-1700, UTC). Learn more about the seminar series and how to join their talks at www.varianteffect.org/seminar-seri...
The composite image shows headshots of the next two speakers of our Variant Effects Seminar Series (VESS) - Mariano Martín Gomez (left) and Seulki Kwon (right).
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 24/09/2026
Are you an AVE member? Membership is open to anyone invested in creating comprehensive variant effect maps. Joining gives you access to: ☑️ Newsletters ☑️ Community Slack channels ☑️ Literature, resources & technical expertise ☑️ Collaboration & career opportunities Join today: tinyurl.com/3smfcaks
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 22/09/2026
Join us on October 6 for another edition of our early career seminar series. The seminar will feature @marianomartin.bsky.social (Institute for Bioengineering of Catalonia) and Seulki Kwon (Broad Institute). More information and joining instructions: www.varianteffect.org/seminar-seri...
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 17/09/2026
We're delighted that Nobel Laureate David Baker, Director of the Institute for Protein Design at the University of Washington, will deliver a keynote address at the Mutational Scanning Symposium, next June. Event registration opens soon. Learn more: tinyurl.com/3x8d5rev Image: Christopher P. Michel
The image shows MSS keynote speaker, Dr David Baker. He is holding a multicoloured protein model towards the camera. Image credit: Christopher P. Michel
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 16/09/2026
Our YouTube channel is a great resource that incudes: ✅ Deep mutational scanning principles ✅ Functional evidence workshops ✅ Mutational Scanning Symposia ✅ Early career seminars ✅ Virology Interest Group talks and more. Search by presenter, topic or series: tinyurl.com/2e4rbcm3
The image is a screenshot of the Atlas of Variant Effects YouTube homepage.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 09/09/2026
If you missed last week's Variant Effects Seminar, you can now find the presentations on the VESS playlist on our YouTube channel. Catch up with the excellent talks from Sergio Garcia Busto and Kortni Kindree whenever it works for you. See the VESS playlist: youtu.be/24n8i78STPQ?...
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/08/2026
If you're interpreting functional assays for clinical use, check out this resource from members of our ClinGen/AVE Functional Data Working Group. Get more information and download the presentation: www.varianteffect.org/clinical-app... Read the preprint: www.medrxiv.org/content/10.6...
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/08/2026
Join us next week for the Variant Effects Seminar! Our September speakers are Sergio Garcia Busto (@sangerinstitute.bsky.social, @cam.ac.uk) and Kortni Kindree (University of Toronto) Learn more about our speakers, their work and how to join the seminar: www.varianteffect.org/seminar-seri...
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 24/08/2026
Have you listened to the Variants and Us (VUS) podcast yet? Now into its second season, the podcast focuses on the basic and translational science necessary to map the effect of variants in disease and rare disease. Listen to all episodes here: www.varianteffect.org/podcast/
The image shows the Variants and Us (VUS) podcast logo, which is a pair of teal-colored headphones over the top of a double-stranded DNA helix with one section highlighted to represent a variant and the pod name. The text says, VUS Pod.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 17/08/2026
Our next Variant Effects Seminar is on September 1. Join Sergio Garcia Busto (@sangerinstitute.bsky.social, @cam.ac.uk) and Kortni Kindree (University of Toronto) and explore their research. Learn more about our speakers' work and how to join the seminar: www.varianteffect.org/seminar-seri...
Visual describes the Variant Effects Seminar Series, showing the next two speakers (Sergio Garcia Busto and Kortni Kindree) names, photos and presentation titles. There is also the logo of the Atlas of Variant Effects Alliance, links to the Zoom and to the seminar series and a QR code leading to the same web page.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 04/08/2026
Don't forget, we'll be live later for our Variant Effects Seminar. Today's talk is with @sarahgurev.bsky.social. Find your time zone and join us at 4.00 pm (UTC): www.varianteffect.org/seminar-seri...
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 29/07/2026
Our Variant Effects Seminar Series returns next Tuesday, August 4! Join @sarahgurev.bsky.social for her presentation, 'Towards reliable viral mutation effect prediction for pandemic preparedness'. Discover Sarah's work and get the event joining info: www.varianteffect.org/seminar-seri...
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 28/07/2026
As our Variant Effect Seminar Series (VESS) returns, we caught up with two of our earliest speakers, Mafalda Dias & Jonathan Frazer. Now group leaders at the Centre for Genomic Regulation (CRG) in Barcelona, we explore the role of VESS in their journey. Read their interview: tinyurl.com/m4ncw2nf
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 23/07/2026
Mark your calendars for the next instalment of our Variant Effects Seminar Series. 🗓️ On August 4, Sarah Gurev will be our sole speaker, with her extended presentation, 'Toward reliable viral mutation effect prediction for pandemic preparedness'. More info: tinyurl.com/4ms3mmzy
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 13/07/2026
Our Variant Effects Seminar Series (VESS) is taking a break this month, but will be back on August 4 with an extended presentation from @sarahgurev.bsky.social, 'Towards reliable viral mutation effect prediction for pandemic preparedness'. Discover VESS and all speakers: tinyurl.com/4atzepeb
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 07/07/2026
Our Variant Effects Seminar Series (VESS) is organized and led by a committee of early career scientists. We asked Priyanka Bajaj and @ohannab.bsky.social about their experiences on the VESS committee, as they depart for new adventures in variant science. Read now: tinyurl.com/lifeaftervess
Composite image of Priyanka Bajaj (left) and Ohanna C. L. Bezerra (right)
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 29/06/2026
Did you know you can find all the Variant Effects Seminars on the AVE YouTube channel? Established in 2021, the seminar series reached its 100 speaker milestone last month. So, there are plenty of great talks to choose from. Find your next watch: tinyurl.com/AVE-VESS #AtlasOfVariantEffects
Screen grab of the Variant Effects Seminar Series (VESS) playlist on the Atlas of Variant Effects (AVE) YouTube Channel.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 25/06/2026
Why should you attend MSS 2027? We asked PhD student Rebeca Olvera-León about her experiences at the last four MSS events, and found out what she was most looking forward to for MSS 2027: bit.ly/4eHgiJz Tell us, what do you hope is on the program for MSS 2027?
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 24/06/2026
We are delighted that Jay Shendure will be a keynote speaker at MSS 2027. He says, "It's phenomenal to see the community that AVE has grown in to, and the impact that it's having. I'm excited to have the opportunity to share some perspective and our latest work." www.varianteffect.org/mss2027/
Dr Jay Shendure stands, arms folded and smiling, with his back to the bench, in his laboratory. Photo courtesy of Ron Wurzer.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 24/06/2026
It's exactly 1 year until the 10th anniversary MSS 2027 in Seattle! MSS unites the functional genomics community, fostering field-defining discussions and collaborations. Co-organizer, Doug Fowler, PhD, discusses the event: bit.ly/4wbDzKV #VariantEffect27 #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 17/06/2026
Don't miss Abbye McEwen's deep dive into interpretation of variants of unknown significance (VUS) - happening today (12.00 pm ET / 9.00 am PT / 5.00 pm BST). Join here: bit.ly/3Seq0LL #DeepMutationalScanning #VariantScientistNetwork #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 15/06/2026
This Wednesday, are you ready to go beyond the VUS and learn more about using multiplexed assays of variant effects (MAVEs) to inform clinical variant classification? It's free to sign up: bit.ly/3Seq0LL #DeepMutationalScanning #VariantScientistNetwork #VUS #MAVE #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 11/06/2026
Last week our Variant Effects Seminar Series (VESS), reached its 100th speaker. Are you in our gallery? Let us know! VESS is led by and exists for early career scientists, enabling them share their work on interpreting human genetic variation. Learn more: www.varianteffect.org/seminar-seri...
The image is a composite of the faces of the 100 different VESS speakers. They are a mix of genders and ethnicities and all are smiling. Above the montage is the Atlas of Variant Effects logo and the text '100 speakers. Variant effects seminar series. VESS'
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 09/06/2026
MAVEs are transforming how labs evaluate genetic variants, providing functional evidence at scale. Join Dr Abbye McEwen for an introduction to MAVEs and to learn how these datasets may help resolve variants of uncertain significance. Register free: bit.ly/3Seq0LL #AtlasOfVariantEffects
On a bright pink background, the event title "Variant Scientist Network  presents - Beyond the VUS: Using MAVE data to inform variant classification" is shown, together with the author name (Abbye McEwen, MD, PhD) and affiliations. The date and time (June 17, 12-1 pm Eastern) are also shown. On the left, there is a headshot of the presenter, a caucasian female with short brown hair and glasses. She is smiling at the camera, wearing a dark top and jewellery.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 01/06/2026
Join us tomorrow for a special VESS seminar, as we mark our 100th speaker milestone with a talk from postdoctoral researcher, Ezequiel Galpern. We also have some special guests, as we look to the next 100 speakers! Joining info: www.varianteffect.org/seminar-seri... #AtlasOfVariantEffects
Milestone at the mic: Celebrating 100 VESS speakers. The image shows celebratory green fireworks, the name and title of presenter (Ezequiel A Galpern) and a joining link and QR code.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/05/2026
Join us, next Tuesday as we mark 100 speakers in VESS! After Ezequiel Galpern's presentation we will celebrate our first 100 speakers and a look to the future of this fantastic early-career seminar series. See you there ➡️ www.varianteffect.org/seminar-seri... #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 20/05/2026
Our Variant Effect Seminar Series is marking a milestone! Join us on Tuesday, June 2, for our 100th speaker, Ezequiel Galpern. Plus, special VESS guests, as we celebrate and look forward to the next 100 speakers! Join here: www.varianteffect.org/seminar-seri... #AtlasOfVariantEffects
The image shows celebratory fireworks in shades of green and has the text "Milestone at the mic: 100 VESS speakers. June 2, 2026. It also details the presenter (Ezequiel Galpern) with a photo and title of his talk.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 18/05/2026
Both talks from the May episode of the Variant Effects Seminar Series (VESS) are now available to watch on our YouTube channel ⏯️ bit.ly/4ud02Xa. Catch up with Thea Klarsø Schulze and Jerome Freudenberg's presentations anytime! #Genomics #VariantInterpretation #AtlasOfVariantEffects
May VESS flier with images of both speakers and their presentation titles.
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 14/05/2026
Catch up on all 3 days' talks from the Mutational Scanning Symposium (MSS) 2026 on our YouTube channel ⏯️ bit.ly/4diP7FD Whether you're watching for the first time or revisiting a favorite talk, there's something insightful to enjoy! #VariantEffect26 #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 13/05/2026
You can now find the Day 2 presentations from the MSS 2026 over on our YouTube channel. ⏯️ bit.ly/4tzo9hQ The final day's talks will be live soon, so watch this space! #VariantEffect26 #Genomics #DeepMutationalScanning #FunctionalGenomics #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 05/05/2026
Tomorrow, our Variant Effect Seminar speakers will be covering various aspects of the modeling of variant effects. They hope you can join them! Details here: www.varianteffect.org/seminar-seri... #Genomics #VariantInterpretation #DeepMutationalScanning #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/04/2026
Next week's Variant Effect Seminar: Thea Klarsø Schulze will discuss predictive models of variant effects on protein abundance. Jerome Freudenberg will cover modeling of variant effects in FACS-based deep mutational scans with Lilace. www.varianteffect.org/seminar-seri... #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 21/04/2026
May's Variant Effect Seminar features Thea Klarsø Schulze of the MRC Laboratory of Molecular Biology, Cambridge, UK and Jerome Freudenberg from the Pimentel lab at UCLA, USA. Bookmark the event in your calendar: www.varianteffect.org/seminar-seri... #AtlasOfVariantEffects
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 15/04/2026
MSS 2026 brought together the global MAVE community for 3 days of superb scientific presentations, posters and interactions. Many thanks to our sponsors: Ambry Genetics, Illumina, AFGN, BBI, Twist Bioscience, the Collaborative Centre for Genomic Cancer Medicine, WEHI, SVI & ACMD. #VariantEffect26
The image says thank you to the sponsors of the Mutational Scanning Symposium (MSS) 2026 and shows the sponsors' logos. These are as follows: 
Gold sponsors: Ambry Genetics and Illumina.
Silver sponsors: Australian Functional Genomics Network (AFGN), Brotman Baty Institute (BBI), the Collaborative Centre for Genomic Cancer Medicine and Twist Bioscience.
Bronze sponsors: WEHI (the Walter and Eliza Hall Institute of Medical Research).
Venue sponsors: St Vincent's Institute of Medical Research (SVI) and The Aikenhead Centre for Medical Discovery (ACMD).
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 06/04/2026
🧬 Join the VESS Organizing Committee! We are looking for early-career scientists to help shape our global, community-driven seminar program. 📅 Deadline to apply: April 30, 2026 ℹ️ Learn more and apply👇 forms.gle/vdLh3mu9Fuid... #VESS #VariantEffects #Seminar #Genomics #EarlyCareer
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/03/2026
The final speaker of the 2026 Mutational Scanning Symposium is Melissa Call from WEHI (Walter and Eliza Hall Institute of Medical Research). Her talk is covering how mutational profiling of SARS-CoV-2 PLpro exposes inhibitor escape routes. #VariantEffect26 #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/03/2026
Many thanks to all our MSS 2026 sponsors. It's great to have you here! At the podium now is Joel Geoghegan from Illumina. #VariantEffect26
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/03/2026
Our last speaker in this session is Linda Wijaya of The Kids Research Institute Australia and The University of Western Australia, whose talk is about unraveling the RASopathy Syndromes using iPSC-derived neural disease modeling. #VariantEffect26 #DiseaseModeling #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/03/2026
Up next on the final day of MSS 2026 is Yu-Jen Lin of the University of California, Berkeley. She's giving a talk on CAGI 7 ARSA missense prediction assessment. #VariantEffect26 #MissenseVariants #CAGI7 #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/03/2026
On stage now is Alistair Dunham of the Wellcome Sanger Institute with a talk about the standardization and joint analysis of 2041 MAVEs. #VariantEffect26 #MAVEs #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/03/2026
We're back with Christopher Hahn from SA Pathology and the University of South Australia, on the topic of deep mutational scanning to measure the transactivational effect of GATA2 and ERG variants to benefit clinical interpretation. #VariantEffect26 #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 27/03/2026
Our final speaker before morning coffee is Doug Fowler from the University of Washington. His talk details pathway-scale variant effect mapping in human cells with LABEL-seq. #VariantEffect26 #LABELseq ##DeepMutationalScanning #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/03/2026
Next to the stage is Jun Yang of St. Jude Children's Research Hospital - ALSAC. His presentation details MAVE-informed protein language models for predicting pharmacokinetics variant function at scale. #VariantEffect26 #MAVEs #ProteinLanguageModels #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/03/2026
We're now joined by Max Stammnitz from the Centre for Genomic Regulation (CRG) in Barcelona. His presentation is about the genetic architecture of allosteric plant hormone receptors. #VariantEffect26 #DeepMutationalScanning #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/03/2026
Taking the stage now is Mark Dawson of the Peter MacCallum Cancer Centre. His talk is about understanding human pathology with base editing at single-cell resolution. #VariantEffect26 #BaseEditing #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/03/2026
Yesterday evening, we enjoyed a fantastic poster session at MSS 2026. There was a real buzz with lots of great conversations! #VariantEffect26
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/03/2026
Opening the final day of MSS 2026 is Maitreya Dunham from the University of Washington. Her keynote is entitled, 'From ARS1 to ZWF1: some adventures in deep mutational scanning'. #VariantEffect26 #DeepMutationalScanning #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/03/2026
Today's final speaker is Polina Polunina from the University of Freiburg. Her presentation today is entitled, 'Modeling viral evolution as sequence transitions: a transformer approach using time-resolved SARS-CoV-2 spike data'. #VariantEffect26 #AtlasOfVariantEffectsAlliance
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Atlas of Variant Effects Alliance @varianteffect.bsky.social · 26/03/2026
Next to speak is Xinyu Wu from WEHI (the Walter and Eliza Hall Institute of Medical Research). His talk discusses the elucidation of distinct conformations in thrombopoietin receptor activation. #VariantEffect26 #DeepMutationalScanning #AtlasOfVariantEffectsAlliance
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