iiinova — where your digital self keeps evolving

Reposted by Umberto Perron

Peter Walker @peterwalker99.bsky.social · 18/12/2024

17-year-long Scottish study of 82,000+ adults finds commuting by bike reduces your risk of: • early death • hospitalisation for any reason • cardiovascular disease • cancer mortality • treatment for mental health problems. Yeah, but those LTNs and bike lanes are *really* annoying.

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Umberto Perron @uperron.bsky.social · 16/12/2024

Definitely doesn't have all the bells and whistles but checklist + Daily notes works well for me youtu.be/ODhHTngIMJE?...

youtu.be

Actually getting things done with Obsidian // Checklist plugin

YouTube video by Nicole van der Hoeven

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Reposted by Umberto Perron

Science News @scinews.bsky.social · 24/11/2024

Three must read papers for PhD students. #scisky #PhD #science #research #academicsky 1. The importance of stupidity in scientific research Open Access journals.biologists.com/jcs/article/...

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Reposted by Umberto Perron

amelie-iska @amelie-iska.bsky.social · 09/12/2024

Immunotherapy for oncology New more effective & cheap anti-venoms Allosteric switch proteins New Alzheimer’s treatments De novo functional nanopores Vaccines And so much more from Baker Lab. Thank you for being such an inspiration and for forging a path forward. 🚀💜 www.youtube.com/live/HnT1VWz...

youtube.com

YouTube

Share your videos with friends, family, and the world

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Reposted by Umberto Perron

Martin Pacesa @martinpacesa.bsky.social · 08/12/2024

We updated our BindCraft preprint with lots of new exciting results! We release all our binder sequences and models, include more in silico analysis, novel design targets, and present AAV retargeting to specific cell types using de novo binders! www.biorxiv.org/content/10.1...

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Reposted by Umberto Perron

Frank Noe @franknoe.bsky.social · 06/12/2024

Super excited to preprint our work on developing a Biomolecular Emulator (BioEmu): Scalable emulation of protein equilibrium ensembles with generative deep learning from @msftresearch.bsky.social ch AI for Science. www.biorxiv.org/content/10.1...

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Reposted by Umberto Perron

Bluesky @bsky.app · 03/12/2024

Scientists, academics, researchers: We’re excited to share that @altmetric.com is now tracking mentions of your research on Bluesky! 🧪

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Reposted by Umberto Perron

Eric Topol @erictopol.bsky.social · 02/12/2024

Strong new evidence for T cell exhaustion in myalgic encephalomyelitis (ME/CFS) reflecting chronic viral infection, relevant to #LongCovid, and possible path to treatment candidates www.pnas.org/doi/epub/10.... @pnas.org

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Reposted by Umberto Perron

Diego del Alamo @delalamo.xyz · 03/12/2024

#ExperimentRequest does anyone have room in their budget to A) retrain MPNN exclusively on cold-adapted proteins and B) express some designs and measure their thermostability?

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Umberto Perron @uperron.bsky.social · 25/11/2024

btw that staircase isn't Midjourney hallucinating, it's actually a real place @embl.org 🧬

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Reposted by Umberto Perron

Charlie Harris @harrisbio.bsky.social · 21/11/2024

Now I can share external links without the posts being down regulated - I thought it would share this again!:) I have compiled a list of now 100+ companies in the 'TechBio' space into a fully open database for the community. Find here and please share if you like open.substack.com/pub/harrisbi...

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Umberto Perron @uperron.bsky.social · 20/11/2024

The sky is blue over the south building @ebi.embl.org 💙

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Umberto Perron @uperron.bsky.social · 19/11/2024

Ah yes, aka the limma syndrome. (I jest ofc, limma is great)

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Reposted by Umberto Perron

Pat Walters @wpwalters.bsky.social · 18/11/2024

There’s a new Practical Cheminformatics post, “Some Thoughts on Dataset Splitting,” (with code and a robot cartoon) at practicalcheminformatics.blogspot.com/2024/11/some... .

A cartoon robot using a chainsaw on a log

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Umberto Perron @uperron.bsky.social · 18/11/2024

aha nice! I wonder if I could combine it with a summary prompt and then use it to create a bot? You could even add a classifier to get the relevant ones 🤔 oh well, into the weekend project pile it goes never to re-emerge

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Umberto Perron @uperron.bsky.social · 17/11/2024

yes, I think the summary output looks very familiar if you've ever played with lit summary prompts. So the secret sauce must be a human in the loop selecting papers from a list of hits? Sounds suspiciously like drug discovery

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Umberto Perron @uperron.bsky.social · 17/11/2024

Any chance of getting Biology+AI Daily in here? Biggest X pull factor left for me tbh

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Umberto Perron @uperron.bsky.social · 17/11/2024

Great stuff! Can't wait to try this out (yay MIT) 🤓

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Umberto Perron @uperron.bsky.social · 17/11/2024

or vs something like TCRmodel2?

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Reposted by Umberto Perron

zack chiang @zchiang.bsky.social · 14/11/2024

who knew it would be easier to get everyone to switch social media platforms than getting them to use hg38

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Umberto Perron @uperron.bsky.social · 13/11/2024

Know as the "not so South building " now I guess? 😎

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Umberto Perron @uperron.bsky.social · 13/11/2024

Woah, on the other side of the road?

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Umberto Perron @uperron.bsky.social · 12/11/2024

Now now that almost makes it sound like AF2 was useless

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Umberto Perron @uperron.bsky.social · 12/11/2024

tweed blazer + dark selvedge high rise + shiny black service boots👌

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Umberto Perron @uperron.bsky.social · 12/11/2024

if anyone wants the full rulebook www.constitution.org/1-History/im...

A page of text containing an English translation of the Hammurabi code of laws

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Umberto Perron @uperron.bsky.social · 11/11/2024

Now we just need the 🤗 port

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Umberto Perron @uperron.bsky.social · 11/11/2024

Dutch cyclists at rush hour are something else, the laws of thermodynamics are a mere suggestion

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Umberto Perron @uperron.bsky.social · 11/11/2024

Welcome to Europe! Look both ways before crossing the bike lane 😅

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Umberto Perron @uperron.bsky.social · 11/11/2024

let's not start RAGging on them already

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Umberto Perron @uperron.bsky.social · 08/11/2024

I'd love that but it feels like there's more options around this time compared to the AF / AF1 days, so less pressure from the community to open source?

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Umberto Perron @uperron.bsky.social · 06/11/2024

Hey, great to see more protein enjoyers around! Your 🤗 ESM2 finetuning tutorials were super helpful btw 🤖

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