Sign in

Turlier lab

@turlierlab.bsky.social
317 followers 379 following 28 posts

Combining biophysical modeling, simulations and AI to understand how cells self-organize into embryos and tissues @cbitoulouse.bsky.social. Team headed by @herveturlier.bsky.social

PostsRepliesMedia
Turlier lab @turlierlab.bsky.social · 24/07/2026
Huge thanks to all co-authors & collaborators! Thanks @ebardot.bsky.social for his kind highlight in Nat Cell Biol shorturl.at/Sq1f4 @cnrsbiologie.bsky.social
shorturl.at
Relative tension shapes embryos - Nature Cell Biology
Nature Cell Biology - Relative tension shapes embryos
050
Turlier lab @turlierlab.bsky.social · 24/07/2026
A central result: cadherin-dependent adhesion contributes significantly to cell-cell tension in C. elegans, with a highly non-linear, Hill-like dependence. Adhesion is not just a small correction to contractility.
120
Turlier lab @turlierlab.bsky.social · 24/07/2026
Inside the eggshell, the model predicts morphogenesis quantitatively: anterior compaction is driven by rising cell-medium tension, while P2’s early exclusion reflects high cell-cell contact tension. 5/6
100
Turlier lab @turlierlab.bsky.social · 24/07/2026
To calibrate inferred tensions, we combined AFM measurements with cortical myosin intensity. AB-lineage cells are more tense than P-lineage cells, and tension rises dynamically through the cell cycle. 4/6
100
Turlier lab @turlierlab.bsky.social · 24/07/2026
We combined live imaging, contact-angle measurements and tension inference to reconstruct relative surface tensions, then used a 3D active foam model to predict embryo shape over time. 3/6
100
Turlier lab @turlierlab.bsky.social · 24/07/2026
The early C. elegans embryo is not mechanically uniform. Removing the eggshell, one can observe that at the 4-cell stage, ABa, ABp and EMS compact together, while P2 initially remains partly excluded — revealing dynamic, lineage-specific mechanics. 2/6
100
Turlier lab @turlierlab.bsky.social · 24/07/2026
Very happy to have this work finally published! How do embryos sculpt their shape? We map the contractile & adhesive forces shaping early C. elegans embryos. With K. Yamamoto @ittoku04.bsky.social G. Charras' lab @gcharras.bsky.social & my team @turlierlab.bsky.social shorturl.at/xv7G5 1/6
14315
Reposted by Turlier lab
Evan Bardot (he/him) @ebardot.bsky.social · 13/07/2026
I had the chance to highlight some amazing #DevBio from @gcharras.bsky.social and @herveturlier.bsky.social for @natcellbio.nature.com this month! Check out my Research Highlight www.nature.com/articles/s41... and the original article in @cp-devcell.bsky.social www.sciencedirect.com/science/arti...
nature.com
Relative tension shapes embryos - Nature Cell Biology
Nature Cell Biology - Relative tension shapes embryos
1228
Reposted by Turlier lab
CNRS Biologie @cnrsbiologie.bsky.social · 10/07/2026
#ResultatScientifique🔎| Une étude révèle comment les forces mécaniques façonnent l’embryon précoce de C. elegans grâce à une nouvelle cartographie spatio-temporelle des tensions cellulaire ▶️ buff.ly/olJR46F 📕 @cp-devcell.bsky.social 🤝 @CNRS.fr
buff.ly
Cartographier les forces qui sculptent l’embryon
Comment quelqu
0124
Turlier lab @turlierlab.bsky.social · 29/06/2026
Great scientific times with @bimidu.bsky.social at @columbiauniversity.bsky.social. Many thanks for your warm welcome and inspiring chats. Looking forward to more interactions!
130
Turlier lab @turlierlab.bsky.social · 19/06/2026
How did you get them in very high image quality in the end?
100
Turlier lab @turlierlab.bsky.social · 19/06/2026
Beautiful !
110
Reposted by Turlier lab
Henry De Belly @henrydebelly.bsky.social · 19/06/2026
We made the cover 🤩 !! Check out this incredible painting by @kahsage.bsky.social !!
3669
Turlier lab @turlierlab.bsky.social · 10/06/2026
Very glad to see this great transatlantic collaborative work published 🎉! Congratulations to all authors: @henrydebelly.bsky.social, @andreu Fernandez Gallén, @ericneiva.bsky.social, and @oweinerlab.bsky.social Funding from MSCA @ec.europa.eu & @cnrsbiologie.bsky.social
081
Reposted by Turlier lab
SFB 1348 @sfb1348.bsky.social · 13/05/2026
The @sfb1348.bsky.social Meeting “Mechanochemical Signals at Cellular Interfaces” is just around the corner! We are excited to welcome an outstanding lineup of international speakers to #Münster for three days of inspiring scientific exchange and discussion. @uni-muenster.de
13113
Turlier lab @turlierlab.bsky.social · 20/04/2026
A real computational tour de force by @ericneiva.bsky.social, carried out as Marie Skłodowska-Curie postdoctoral fellow in the team, now published in the Journal of Computational Physics: urlr.me/AuzK86 Congratulations, Eric! @cnrsbiologie.bsky.social Grateful to @ec.europa.eu for funding support
0217
Turlier lab @turlierlab.bsky.social · 12/04/2026
We hope VertAX can help make inverse problems & differential programming more accessible in tissue mechanics. Thanks to @apasqui.bsky.social, Maxence Ernoult, Italian colleagues, and other members of the team for this collaboration. Comments very welcome. Code: github.com/VirtualEmbry... 5/5
github.com
GitHub - VirtualEmbryo/VertAX: A differentiable JAX-based framework for vertex modeling and inverse design of epithelial tissues
A differentiable JAX-based framework for vertex modeling and inverse design of epithelial tissues - VirtualEmbryo/VertAX
010
Turlier lab @turlierlab.bsky.social · 12/04/2026
Beyond synthetic benchmarks, we show applications to mechanical parameter inference from microscopy images and to inverse design problems in epithelial tissues. 4/5
110
Turlier lab @turlierlab.bsky.social · 12/04/2026
We benchmark three strategies for bilevel optimization in vertex models: automatic differentiation, implicit differentiation, and equilibrium propagation. This gives a practical comparison of their accuracy, speed, and memory trade-offs. 3/5
110
Turlier lab @turlierlab.bsky.social · 12/04/2026
VertAX unifies forward modeling and inverse modeling in the same framework. It lets users define custom energy functions and cost functions in pure Python, while leveraging JAX and bilevel optimization for differentiation, JIT compilation, and GPU acceleration. 2/5
100
Turlier lab @turlierlab.bsky.social · 12/04/2026
How can we learn tissue mechanics directly from cell patterns and images? In our new preprint, we introduce VertAX, a differentiable vertex-model framework in JAX for simulating epithelia, inferring parameters, and designing target tissue behaviors. shorturl.at/PUzT0 1/5
15221
Reposted by Turlier lab
FocalPlane @focalplane.bsky.social · 07/04/2026
The abstract deadline for the CSHL Cell Modeling in Space and Time is this Friday 10 April. Don’t miss out!
focalplane.biologists.com
Cell Modeling in Space and Time at CSHL - FocalPlane
Cell Modeling in Space and Time at CSHL -
022
Turlier lab @turlierlab.bsky.social · 13/03/2026
If you’re interested in the different biophysical mechanisms animal embryos use to form a blastocoel cavity, this review may also be of interest: shorturl.at/Q3LLj
shorturl.at
Blastocoel morphogenesis: A biophysics perspective
The blastocoel is a fluid-filled cavity characteristic of animal embryos at the blastula stage. Its emergence is commonly described as the result of c…
000
Turlier lab @turlierlab.bsky.social · 13/03/2026
Extended theory in PLOS Computational Biology in 2021 shorturl.at/sgkJl.
shorturl.at
A hydro-osmotic coarsening theory of biological cavity formation
Author summary The formation of a single biological cavity, or lumen, in tissues and embryos has been widely studied experimentally but the collective dynamics of multiple lumens has received much les...
120
Turlier lab @turlierlab.bsky.social · 13/03/2026
Experimental study and simple modeling in Science 2019 shorturl.at/zZN2o
shorturl.at
Hydraulic fracturing and active coarsening position the lumen of the mouse blastocyst
Fluid dynamics are key to lumen production and symmetry breaking in the early mammalian embryo.
100
Turlier lab @turlierlab.bsky.social · 13/03/2026
Glad to see our work discussed in Quanta Magazine shorturl.at/VXa7E. In the early embryo, building a cavity can start by “fracturing” cell-cell contacts, creating microlumens that then coarsen into a single cavity. @cnrsbiologie.bsky.social
shorturl.at
Break It To Make It: How Fracturing Sculpts Tissues and Organs | Quanta Magazine
Growing tissues can crack, break, and dissociate to form structures that can later withstand immense forces.
180
Turlier lab @turlierlab.bsky.social · 13/03/2026
Excited to start a new chapter with my team’s relocation to the Pink City, at @cbitoulouse.bsky.social! Looking forward to new scientific interactions on campus (@laas, LPT, IRIT, ANITI…) at the interface of biology, physics & computational science. @cnrsbiologie.bsky.social @occitanie.bsky.social
5245
Turlier lab @turlierlab.bsky.social · 20/01/2026
How does a ball of cells become an embryo? Genes matter—but physics (forces, geometry, topology) drives self-organization. Hervé Turlier's research vision on the physics of embryogenesis👇 shorturl.at/761x9 #Embryogenesis #Biophysics #Morphogenesis @college-de-france.fr @cnrsbiologie.bsky.social
041
Turlier lab @turlierlab.bsky.social · 04/09/2025
Congratulations David !
110
Reposted by Turlier lab
Barone Lab @baronelab.bsky.social · 07/07/2025
This postdoc position is still open! Apply if you want to come work with us on asymmetric cell divisions in spiralian embryos! postdocs.stanford.edu/prospective/...
postdocs.stanford.edu
Open Postdoctoral position, faculty mentor Vanessa Barone | Office of Postdoctoral Affairs
03127
Turlier lab @turlierlab.bsky.social · 25/06/2025
Our first paper submitted to the International Conference on Computer Vision @iccv.bsky.social has been accepted! 🎉 Huge congratulations to all co-authors — Sacha Ichbiah, Anshuman Sinha, and Fabrice Delbary — for their fantastic work. Stay tuned… we’ll share more about deltaMic in a few days!
0143
Reposted by Turlier lab
Barone Lab @baronelab.bsky.social · 28/05/2025
Job Alert! We are recruiting one postdoc to work on spiralian embryos and their crazy polar lobes. More info about this HFSP-funded position on our website baronelab.org: scroll to the end, click on "this could be you"...start your adventure!
37947
Turlier lab @turlierlab.bsky.social · 19/05/2025
Great time with @sugimuralab.bsky.social, Shuji Ishihara and colleagues at Tokyo University 🇯🇵. Thank you for your very kind welcome and great scientific discussions 🙂
040
Turlier lab @turlierlab.bsky.social · 16/05/2025
Very excited to share a new preprint by @ericneiva.bsky.social who developed a first-of-its-kind finite element method for simulating 3D cellular dynamics with coupled surface–bulk flows and signaling. A technical tour de force with broad applications in mechanobiology & beyond tinyurl.com/bdfhfke3
0134
Turlier lab @turlierlab.bsky.social · 23/04/2025
First post on bsky for a very good news. Very glad to be awarded this HFSP with @chemamd.bsky.social & @baronelab.bsky.social to study the evolutionary biophysics of spiralian early asymmetric divisions ! @hfspo.bsky.social @cnrsbiologie.bsky.social @collegedefrance.bsky.social @cirbcdf.bsky.social
1236