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Kimika Teorikoa Lab

@theochemehu.bsky.social
247 followers 296 following 63 posts

Theoretical Chemistry Laboratory at UPV-EHU Donostia - San Sebastián www.ehu.es/chemistry/theory

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Reposted by Kimika Teorikoa Lab
Daniel Reta @danireta.bsky.social · 02/10/2026
📣 we are hiring! Fully funded PhD position at EHU to study single electron transfer in organic radicals using computational chemistry methods 📅 Deadline: November 2 👇 Details below, please repost www.danielreta.com/phd-computat... #compchem #chemsky @theochemehu.bsky.social @erc.europa.eu
danielreta.com
PhD in Theoretical Chemistry and Computational Modelling — Daniel Reta Research Group
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Reposted by Kimika Teorikoa Lab
DIPC @dipcehu.bsky.social · 07/09/2026
SPARK ⚡ Sessions in Physics: Research and Knowledge In September DIPC will launch an annual initiative that will bring together around 50 researchers from around the world to address cutting-edge scientific challenges through a collaborative format 👉https://tinyurl.com/2s359x2x
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Reposted by Kimika Teorikoa Lab
David De Sancho @daviddesancho.bsky.social · 01/09/2026
Check out our first contribution to the #nanoneuro project🧠, led by super-star postdoc Dulce Guzmán Ocampo "Molecular basis of AMPA receptor labeling by ligand-directed acyl imidazole chemistry in living neurons" biorxiv.org/content/10.6... @dipcehu.bsky.social
biorxiv.org
Molecular basis of AMPA receptor labeling by ligand-directed acyl imidazole chemistry in living neurons
Rational design of covalent protein-labeling reagents in complex biological environments requires a molecular-level understanding of how the protein microenvironment governs chemical reactivity; yet, ...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 30/07/2026
Check out the latest work by Elixabete Rezabal,Elena Formoso and Jon Zubeltzu from our lab, now available at @pccp.rsc.org doi.org/10.1039/d6cp... @ehu.eus @dipcehu.bsky.social
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Kimika Teorikoa Lab @theochemehu.bsky.social · 28/07/2026
Check out the latest effort by Gaetano Ricci from our lab link.springer.com/article/10.1... @dipcehu.bsky.social
link.springer.com
Tuning the spin-component scaling scheme for inverted singlet–triplet (INVEST) systems: improving CC2 and ADC(2) from excited-state energies to topological features - Theoretical Chemistry Accounts
Inverted singlet–triplet (INVEST) materials, characterized by a negative singlet–triplet energy gap (ΔEST), hold great promise for next-generation Organic Light Emitting Diode (OLED) applications. How...
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Reposted by Kimika Teorikoa Lab
Daniel Reta @danireta.bsky.social · 09/06/2026
At the International Symposium of Organic Free Radicals in Bologna, presenting our work on nitroaromatic radicals #ISOFR #RadicalChemistry #compchem #chemsky @erc.europa.eu @theochemehu.bsky.social @dipcehu.bsky.social
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Kimika Teorikoa Lab @theochemehu.bsky.social · 06/06/2026
Proud of our Irene Casademont Reig for her Alumni Award at @univgirona.bsky.social @dipcehu.bsky.social diaridegirona.cat/girona/2026/...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 29/05/2026
Check the latest collaborative work by Eduard Matito @dipcehu.bsky.social www.nature.com/articles/s41...
nature.com
Chemical bonding concepts emerge naturally from maximally entangled atomic orbitals - Nature Communications
Chemical bonding explains how atoms bind together, but it remains hard to define in universal terms. Here, the authors use quantum entanglement to uncover and quantify bonds in complex systems beyond ...
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Reposted by Kimika Teorikoa Lab
Daniel Reta @danireta.bsky.social · 20/02/2026
Very proud of Lisa after her first PhD talk at the @dipcehu.bsky.social within the @theochemehu.bsky.social seminar series. #epr #radicals #chemsky #compchem
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Reposted by Kimika Teorikoa Lab
Juan Felipe Huan Lew Yee @felipelewyee.bsky.social · 07/03/2026
I'm happy to share my new article in collaboration with Prof. Mario Piris and @imitxelena003.bsky.social, from @theochemehu.bsky.social Here, we show that GNOF/GNOFm can reproduce CCSD(T) trends, capturing correlation and dipole moments. 📊 #QuantumChemistry #NOF #JCTC pubs.acs.org/doi/10.1021/...
pubs.acs.org
5- and 6-Membered Rings: A Natural Orbital Functional Study
The Global Natural Orbital Functional (GNOF) provides a straightforward approach to capture most electron correlation effects without needing perturbative corrections or limited active spaces selectio...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 04/02/2026
Join us for the Summer School in Biomolecular Simulations with AMBER #AMBER2026 amber2026.dipc.org MD workflows, QM/MM, Free energy, ML potentials... 💻 Organized by @xabierjota.bsky.social & Darrin York 📅 Dates: 13-17 July 2026 📍Donostia-San Sebastián (Spain)
amber2026.dipc.org
Scope
amber2026
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Kimika Teorikoa Lab @theochemehu.bsky.social · 02/02/2026
Check out the last collaborative work by David Casanova @dipcehu.bsky.social Electronic structure origins of radical character in triangular fused acenes: sextet stabilization vs. antiaromaticity release - now published in Organic Chemistry Frontiers pubs.rsc.org/en/content/a...
pubs.rsc.org
Electronic structure origins of radical character in triangular fused acenes: sextet stabilization vs. antiaromaticity release
Open-shell hydrocarbons are of great interest in molecular materials, yet their electronic structures remain challenging to describe. Here we investigate triangular acenes, formed by fusing three iden...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 29/01/2026
Check out the latest by Abel Carreras and David Casanova, here with Román Orús @dipcehu.bsky.social doi.org/10.1039/D5CP...
doi.org
Limitations of quantum hardware for molecular energy estimation using VQE
Variational quantum eigensolvers (VQEs) are among the most promising quantum algorithms for solving electronic structure problems in quantum chemistry, particularly during the noisy intermediate-scale...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 27/01/2026
Check the latest work by Alicia Omist and David Casanova, now available at JCTC from @acs.org @dipcehu.bsky.social pubs.acs.org/doi/full/10....
pubs.acs.org
Spin-Permutation Diabatization: A General Framework for Spin Localization and Exchange Coupling
We present a spin-permutation diabatization strategy that transforms ab initio spin-pure eigenstates into spin-localized diabatic states, enabling direct mapping to spin-effective Hamiltonians without projection or orbital localization. The method provides both a real-space decomposition of electronic states in terms of localized spins and a straightforward evaluation of exchange couplings. Applications to several representative systems, including ethylene torsion, prototypical diradicals (benzynes, xylylenes, methylene), trimethylenebenzene triradical, singlet–triplet excited states of organic chromophores, and triplet-pair states in a tetracene dimer, demonstrate that the approach provides magnetic couplings and affords a clear physical interpretation of interacting spins. This general and conceptually transparent framework bridges ab initio electronic structure theory and spin models, and is expected to be especially valuable for systems with nontrivial distributions of unpaired electrons, such as delocalized or strongly correlated molecular magnets and spin-active chromophores.
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Reposted by Kimika Teorikoa Lab
BioExcel CoE @bioexcelcoe.bsky.social · 14/01/2026
If you are an early-stage career scientist 🧑‍🔬 using biomolecular simulations the BioExcel Summer School is for you! Running since 2018 it always receives outstanding reviews Apply here ➡️ bioexcel.eu/4ooy Deadline for applications: 1st February! #training #molecularsimulations #community
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Kimika Teorikoa Lab @theochemehu.bsky.social · 07/01/2026
Check out the latest collaborative effort by David Casanova, now available at J. Comput. Chem. @dipcehu.bsky.social onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com
Localized Molecular Orbitals for Single Excitation Theories
This figure illustrates the workflow for analyzing excited states using localized molecular orbitals (LMOs). Canonical molecular orbitals (CMOs) from self-consistent field calculations are transforme...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 19/12/2025
Big day for the group!
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Reposted by Kimika Teorikoa Lab
DIPC @dipcehu.bsky.social · 19/12/2025
We've got a new PhD!👏👏 Today, Aitor Díaz Andrés defended his #PhD thesis 'From electronic coupling to exciton dynamics: Modeling photophysical processes in rubrene solids', carried out under the supervision of David Casanova (DIPC, Ikerbasque) Zorionak Aitor! 🥳
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Kimika Teorikoa Lab @theochemehu.bsky.social · 18/12/2025
Check out the latest by David Casanova from our lab @dipcehu.bsky.social Assessing Second-Order Perturbative Corrections to Restricted Active Space CI for Valence Excitations in Organic Molecules | now available The Journal of Physical Chemistry A pubs.acs.org/doi/full/10....
pubs.acs.org
Assessing Second-Order Perturbative Corrections to Restricted Active Space CI for Valence Excitations in Organic Molecules
We benchmark second-order perturbative corrections to the Restricted Active Space Configuration Interaction in the hole and particle approximation, RAS(h,p), for valence singlet and triplet excitation...
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Reposted by Kimika Teorikoa Lab
Daniel Reta @danireta.bsky.social · 16/12/2025
📣 we are hiring! We are looking for candidates for a fully funded PhD position at EHU to study organic radicals and charge-to-spin conversion mechanisms using computational chemistry methods @ec.europa.eu 👩‍🔬🧑‍🔬 📅 Deadline: April 17 👇 Details below, please RT www.danielreta.com/phd-computat...
danielreta.com
PhD in Theoretical Chemistry and Computational Modelling — Daniel Reta Research Group
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dft2026 @dft2026eus.bsky.social · 01/12/2025
Here we are, the moment we’ve all been waiting for. 📢 Registration & Abstract Submission Now Open! Register before 15 March 2026 to secure the early bird fee! 📅 Abstract submission is open until 31 May 2026. Find all details here: dft2026.com #DFT2026
dft2026.com
DFT 2026
21st International Conference on Density Functional Theory and its Applications
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Kimika Teorikoa Lab @theochemehu.bsky.social · 01/12/2025
Fresh news! 📷 Registration & Abstract Submission for #DFT2026 Now Open! Register before 15 March 2026 to secure the early bird fee! Abstract submission is open until 31 May 2026. Find all details here: dft2026.com
dft2026.com
DFT 2026
21st International Conference on Density Functional Theory and its Applications
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Reposted by Kimika Teorikoa Lab
MDDB @mddbeu.bsky.social · 26/11/2025
Excited to share a fantastic set of sessions coming up at the MDDB Conference: Day 1: Large-scale MD simulations Day 2: MD kinetics and free energy / Industrial applications of MD Day 3: Innovative applications of MD to biological systems Explore more and register at ➡️ mddbr.eu/conference/ #MDDB
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Kimika Teorikoa Lab @theochemehu.bsky.social · 24/11/2025
Check out this piece on the latest collaborative work by Elisa Jiménez Izal, Txema Mercero and Ramón Bergua from our lab @dipcehu.bsky.social @ehu.eus
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Kimika Teorikoa Lab @theochemehu.bsky.social · 03/10/2025
🧑‍🎓We have a new PhD!!!! 🥳 Congrats to the great Antonio Cebreiro, who today defended his PhD, supervised by David Casanova @dipcehu.bsky.social
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David De Sancho @daviddesancho.bsky.social · 03/10/2025
Check out our latest, where we investigate the molecular origin of differences between Lys and Arg and their roles in biomolecular #condensates @dipcehu.bsky.social www.biorxiv.org/content/10.1...
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Reposted by Kimika Teorikoa Lab
David De Sancho @daviddesancho.bsky.social · 29/09/2025
Last week, we were lucky to have Jorge Reñé Espinosa from @ucm.es visiting us at UPV-EHU and @dipcehu.bsky.social If you missed his talk, here is the recording for your delight 👇 www.youtube.com/watch?v=ibsJ...
youtube.com
Multiscale modelling of liquid-liquid and liquid-solid transitions in biomolecular condensates
YouTube video by Donostia International Physics Center
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Reposted by Kimika Teorikoa Lab
David De Sancho @daviddesancho.bsky.social · 26/09/2025
Happening in ~1 hour 👇
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Kimika Teorikoa Lab @theochemehu.bsky.social · 23/09/2025
Check out the latest by David Casanova and co-workers @dipcehu.bsky.social *Pruned-ADAPT-VQE: Compacting Molecular Ansätze by Removing Irrelevant Operators* Now available at JCTC pubs.acs.org/doi/full/10....
pubs.acs.org
Pruned-ADAPT-VQE: Compacting Molecular Ansätze by Removing Irrelevant Operators
The adaptive derivative-assembled problem-tailored variational quantum eigensolver (ADAPT-VQE) is one of the most widely used algorithms for electronic structure calculations in quantum computers. It adaptively selects operators based on their gradient, constructing ansätze that continuously evolve to match the energy landscape, helping avoid local traps and barren plateaus. However, this flexibility in reoptimization can lead to the inclusion of redundant or inefficient operators that have almost zero parameter value, barely contributing to the ansatz. We identify three phenomena responsible for the appearance of these operators: poor operator selection, operator reordering, and fading operators. In this work, we propose an automated, cost-free refinement method that removes unnecessary operators from the ansatz without disrupting convergence. Our approach evaluates each operator after ADAPT-VQE optimization by using a function that considers both its parameter value and position in the ansatz, striking a balance between eliminating low-coefficient operators while preserving the natural reduction of coefficients as the ansatz grows. Additionally, a dynamic threshold based on the parameters of recent operators enables efficient convergence. We apply this method to several molecular systems and find that it reduces ansatz size and accelerates convergence, particularly in cases with flat energy landscapes. The refinement process incurs, at most, a small additional computational cost and consistently improves or maintains ADAPT-VQE performance.
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Reposted by Kimika Teorikoa Lab
David De Sancho @daviddesancho.bsky.social · 22/09/2025
Condensate aficionados, this week, do not miss Jorge Reñe Espinosa's talk at @dipcehu.bsky.social Friday 26 September: 12:00 PM CET Zoom: dipc-org.zoom.us/j/97796482927 YouTube: youtube.com/live/ibsJcLv...
dipc-org.zoom.us
Join our Cloud HD Video Meeting
Zoom is the leader in modern enterprise cloud communications.
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Kimika Teorikoa Lab @theochemehu.bsky.social · 22/09/2025
Eduard Matito and Mario Piris from our lab presenting their recent work at QVEST2025 at Schloss Ringberg @dipcehu.bsky.social @ehu.eus
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Ignacio Arganda-Carreras @iarganda.eurosky.social · 20/09/2025
¿Alguien en Bilbao hoy (sábado 20 de septiembre)? No perderse la charla de la maravillosa @elirezabal.bsky.social 😍 (@theochemehu.bsky.social, @dipcehu.bsky.social) en @naukas.bsky.social #NAUKAS2025 ⏰11:30 a 11:40 – 💫Elixabete Rezabal💫 – ¿Hueles vibraciones? 👃📳 naukas.com/2025/09/12/p...
naukas.com
Programa definitivo de Naukas Bilbao 15º Aniversario - Naukas
Programa definitivo Naukas Bilbao 15 Aniversario (19 al 21 septiembre 2025)
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DIPC @dipcehu.bsky.social · 19/09/2025
Today #DIPCseminars 👇 📌 Kimika Teorikoa Seminar: Number of Bonds in Diatomic Molecules from Excited State Potential Energy Curves 👩‍🔬 Ishita Bhattacharjee, DIPC 🗓️ Sep 19, 10:00 🏫 DIPC Josebe Olarra Seminar Room
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Amaia Cipitria @amaiacipitria.bsky.social · 17/09/2025
We are hiring, please RT! Lab manager in the #HEALIKICK #H2020 #HorizonEU project, responsible for biological sample processing and general lab aspects. Biotechnology, Biomedical engineering, Biomedicine or similar. @biogipuzkoa @Ikerbasque. More info & apply until 15/10 👉https://bit.ly/46tSKUl
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BioExcel CoE @bioexcelcoe.bsky.social · 17/09/2025
Happening next week! Our 23-September, special edition webinar will feature talks on topoisomerase inhibition, transmembrane signalling and membrane multilamellarity Register here ➡️bioexcel.eu/ion8
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David De Sancho @daviddesancho.bsky.social · 17/09/2025
Out in its final form pubs.acs.org/doi/10.1021/...
pubs.acs.org
Resolving Molecular Interactions in Protein Folding Trajectories with NCIPLOT
Noncovalent interactions (NCIs) are fundamental to the structure, stability, and function of proteins. These interactions form complex networks that control how different protein regions relate to eac...
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Reposted by Kimika Teorikoa Lab
David De Sancho @daviddesancho.bsky.social · 09/09/2025
📣 @xabierjota.bsky.social and I are looking for candidates for a fully funded PhD position at UPV / EHU to study intrinsically disordered proteins using molecular simulations and computational chemistry calculations 👩‍🔬🧑‍🔬 📅 Deadline: October 1st 👇 Details below, please RT
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Kimika Teorikoa Lab @theochemehu.bsky.social · 01/09/2025
Check out the last collaborative effort by David Casanova and Claire Tonnelé from our laboratory @dipcehu.bsky.social advanced.onlinelibrary.wiley.com/doi/10.1002/...
advanced.onlinelibrary.wiley.com
A New Class of Diarylethene Compounds that Exhibit Turn‐On Emission: From Aggregation‐Induced Emission to Anti‐Kasha Emission
A new class of diarylethene compounds containing backbone phosphine oxide groups are reported, exhibiting turn-on aggregation-induced emission. Side chain functionalization enabled emission color tun...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 30/07/2025
Group picture in the last day of the 25th Anniversary Workshop of the TCCM Master ⚗️ 💻 Congratulations to the organisers and big thanks to all the participants for coming to Donostia-San Sebastián 👏👏👏👏
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Jose A. Esteban @jaestebancbm.bsky.social · 29/07/2025
Y aquí va la distribución completa de proyectos: - 2/3 partes de los proyectos tienen 50.000€ o menos por año. Esto no cambia. - La financiación media por proyecto baja ligeramente (2%) respecto al PID2023. - El porcentaje de éxito cae al 46% (49% en el PID2023). La ciencia en España se estanca. 😕
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DIPC @dipcehu.bsky.social · 30/07/2025
Today #DIPCseminars 👇 📌 Seminar-I of internships students at DIPC 🗓️ July 30, 10:00 🏫 DIPC Josebe Olarra Seminar Room
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DIPC @dipcehu.bsky.social · 28/07/2025
"The Theoretical Chemistry and Computational Modeling (TCCM): 25 years promoting excellence" workshop is already underway! It will be held from July 28 to 30 at Miramar Palace (Donostia / San Sebastián) tccm25.dipc.org @uik-eus.bsky.social
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David De Sancho @daviddesancho.bsky.social · 24/07/2025
Check out the updated version of our preprint "Crossover in Aromatic Amino Acid Interaction Strength: Tyrosine vs. Phenylalanine in Biomolecular Condensates", with @xabierjota.bsky.social @dipcehu.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Crossover in Aromatic Amino Acid Interaction Strength: Tyrosine vs. Phenylalanine in Biomolecular Condensates
Biomolecular condensates often form through the self-assembly of disordered proteins with low-complexity sequences. In these polypeptides, the aromatic amino acids phenylalanine and tyrosine act as ke...
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Reposted by Kimika Teorikoa Lab
DIPC @dipcehu.bsky.social · 24/07/2025
We've got a new PhD!👏👏 Today, David Silva Brea defended his #PhD thesis 'Aluminium modulation of the dynamics of short disordered peptides', carried out under the supervision of Xabier López (DIPC) and David de Sancho (DIPC)  Zorionak David! 🥳
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Kimika Teorikoa Lab @theochemehu.bsky.social · 22/07/2025
Check out the latest collaborative effort by David Casanova @dipcehu.bsky.social Atomistic Mechanism of Perovskite Grain Boundary Healing by Halide Doping: Machine Learning and Ab Initio Analyses | Chemistry of Materials pubs.acs.org/doi/10.1021/...
pubs.acs.org
Atomistic Mechanism of Perovskite Grain Boundary Healing by Halide Doping: Machine Learning and Ab Initio Analyses
Facile methods of materials fabrication create polycrystalline structures and introduce grain boundary (GB) and other defects that influence performance. Focusing on a typical GB in a popular all-inorganic metal halide perovskite, we combine ab initio and machine learning tools to study the evolution of the GB structural and electronic properties in a halide-rich environment on a nanosecond time scale. We demonstrate that separately, the GB and halide dopant introduce midgap electron and hole trap states. However, the chemical driving force and low barriers allow dopant diffusion to the GB region, resulting in self-passivation of the extended and point defects. Every few tens or hundreds of picoseconds, the halide dopant hops, perturbing geometric and electronic structure and giving rise to trap states within the bandgap. This lasts only transiently, a few picoseconds. Halide doping makes the GB more structurally sound compared to the undoped GB, which exhibits long, 100 ps regions of structural instability and persistent trap states. The transient trap states originate from jammed structures in sub-boundary regions, while unfavorable conformations directly at the GB have sufficient space to relax. Most of the time, the doped GB contains no midgap traps while separating electrons and holes and assisting in exciton dissociation. The demonstrated self-healing of perovskite GBs under halide-rich conditions provides an efficient strategy for improving material properties. The detailed atomistic analysis, obtained with the help of modern machine learning tools, assists in resolving conflicting statements regarding the influence of perovskite GBs on material performance and provides valuable insights into the unusual properties of these important materials.
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Kimika Teorikoa Lab @theochemehu.bsky.social · 08/07/2025
Check out the latest by Antonio Cebreiro and David Casanova @dipcehu.bsky.social State-Interaction Approach for g-Matrix Calculations in TDDFT: Ground-Excited State Couplings and beyond First-Order Spin–Orbit Effects | Journal of Chemical Theory and Computation pubs.acs.org/doi/full/10....
pubs.acs.org
State-Interaction Approach for g-Matrix Calculations in TDDFT: Ground-Excited State Couplings and beyond First-Order Spin–Orbit Effects
We introduce a state-interaction approach for computing g-matrices within time-dependent density functional theory (TDDFT) and the Tamm–Dancoff approximation (TDA), applied here for the first time. Th...
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Kimika Teorikoa Lab @theochemehu.bsky.social · 26/06/2025
And yet another round of (mostly adoptive) Basque theoretical chemists at #watoc2025
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Kimika Teorikoa Lab @theochemehu.bsky.social · 24/06/2025
And more of our group members at the #Watoc2025 poster sessions
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Kimika Teorikoa Lab @theochemehu.bsky.social · 24/06/2025
Mario Piris from our lab presenting his work at #watoc2025 @dipcehu.bsky.social
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Kimika Teorikoa Lab @theochemehu.bsky.social · 23/06/2025
Full house at Eduard Matito's talk today in #WATOC2025 @dipcehu.bsky.social
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