iiinova — where your digital self keeps evolving

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Joshua Bull @joshuabull.bsky.social · 13/12/2024

Sounds like what we need is something that makes it easier to generate quantitative, interpretable metrics that describe observable biological differences in tissue, without being a black box and requiring unreasonable amounts of training data... www.muspan.co.uk doi.org/10.1101/2024...

doi.org

MuSpAn: A Toolbox for Multiscale Spatial Analysis

The generation of spatial data in biology has been transformed by multiplex imaging and spatial-omics technologies, such as single cell spatial transcriptomics. These approaches permit detailed mappin...

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Philip Dunne @profpipdunne.bsky.social · 06/12/2024

Massive congrats to Shania, Svetlana & Noha (not on Bsky) identifying the mechanistic and phenotype cascades underpinning the anti-metastatic response triggered by viral mimicry TLDR; aggressive CMS4 tumours can be reprogrammed towards less aggressive CMS1 biorxiv.org/content/10.1... thread 👇

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Fabian Theis @fabiantheis.bsky.social · 20/11/2024

1/ 🧬 Single-cell genomics reveals biological variations beyond cell types. Unveiling these in separate latent dim’s is known as disentanglement. Led by @AmirAliMoinfar, we develop DRVI to learn nonlinear, disentangled & interpretable latent spaces. biorxiv.org/content/10.1101/2024.11.06.622266v1

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Itai Yanai @itaiyanai.bsky.social · 19/11/2024

We ask students to write a research proposal, but we should also teach them about how the project will likely actually unfold.

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Sid @sidmall.bsky.social · 18/11/2024

Hello, could I be added too, please. Thanks!

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Sid @sidmall.bsky.social · 16/11/2024

Hello 👋, I would be keen to join too, please. Thank you!

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Sid @sidmall.bsky.social · 16/11/2024

Hello, would love to be included as well, please! Thank you.

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