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Ryota IINO 飯野亮太

@ryotaiino.bsky.social
431 followers 376 following 211 posts

Professor. Institute for Molecular Science, NINS, Japan. Molecular Motors. Lab: groups.ims.ac.jp/organization/iino_… Google Scholar: scholar.google.jp/citations?hl=en&u… YouTube: www.youtube.com/@IINOG_IMS

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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 02/10/2026
Takanori's paper is out! Artificial DNA-nano/microparticle motors: Factors governing speed, run length, and unidirectionality revealed by geometry-based kinetic simulations www.cell.com/biophysj/ful... Audio: How particle size dictates artificial DNA motor movement www.youtube.com/watch?v=YQ8P...
youtube.com
5-min audio overview: How particle size dictates artificial DNA motor movement
YouTube video by IINO Group, IMS. Molecular Motors
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 28/09/2026
中村さんに分子科学フォーラムで講演して頂きます!YouTubeLiveとニコニコ動画(URLは後日)でのオンライン開催です。 2026年10月29日(木) 18:00-19:30 中村彰彦(静岡大学グリーン科学研究所 教授) 固体と液体のはざまで働く酵素分子を見て、理解して、作り変える -1分子計測が明かす酵素の真の姿- YouTubeLive www.youtube.com/watch?v=AMxW... www.ims.ac.jp/research/sem...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 16/09/2026
Dr. Shuntaro Amano (TU Delft) will give a seminar at IMS in November 16th! Life-inspired (supra)molecular systems out of equilibrium based on Brownian ratchet mechanisms November 16th, 2026, 14:00-15:00 Large Meeting Room, 2F, 3rd bldg., Yamate Campus scholar.google.com/citations?us...
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Reposted by Ryota IINO 飯野亮太
Nature Nanotechnology @natnano.nature.com · 06/07/2026
dlvr.it
Stepping ahead toward custom-designed autonomous motor proteins
Nature Nanotechnology, Published online: 06 July 2026; doi:10.1038/s41565-026-02210-4An artificial protein walker ‘Tumbleweed’ demonstrates ligand-driven stepping on DNA tracks, marking a key advance toward modular, custom-designed autonomous motor proteins.
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Reposted by Ryota IINO 飯野亮太
Nature Nanotechnology @natnano.nature.com · 06/07/2026
dlvr.it
Clocked stepping of an artificial protein walker along a DNA track
Nature Nanotechnology, Published online: 06 July 2026; doi:10.1038/s41565-026-02211-3A synthetic three-footed protein walker assembled from non-motor protein domains takes directional steps along a DNA track powered by Brownian ratchet motion driven by free energy transduction from microfluidically delivered ligands.
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 06/07/2026
I contributed News&Views article to Nature Nanotechnology @natnano.nature.com. Artificial protein walker! Stepping ahead toward custom-designed autonomous motor proteins www.nature.com/articles/s41... Clocked stepping of an artificial protein walker along a DNA track www.nature.com/articles/s41...
nature.com
Stepping ahead toward custom-designed autonomous motor proteins - Nature Nanotechnology
An artificial protein walker ‘Tumbleweed’ demonstrates ligand-driven stepping on DNA tracks, marking a key advance toward modular, custom-designed autonomous motor proteins.
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 30/05/2026
原島さんの総説が生物物理誌に出版されました!おめでとうございます! DNA人工分子モーターの合理的性能向上 原島 崇徳,大友 章裕,飯野 亮太 生物物理66(3),166-169(2026) DOI: 10.2142/biophys.66.166 www.biophys.jp/journal/jour...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 11/05/2026
We are accepting applications for one professor position at the Institute for Molecular Science, Japan. Job description: Experimental research on the creation of materials toward the exploration of novel functions and properties Application deadline: August 10th, 2026 www.ims.ac.jp/en/recruit/2...
ims.ac.jp
Professor in the Department of Life and Coordination-Complex Molecular Science - Recruitment | Institute for Molecular Science
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 11/05/2026
【拡散希望】 分子科学研究所生命・錯体分子科学研究領域の教授1名を公募中です。奮ってご応募ください! 職務内容:新規機能・物性開拓を目指した物質創製の実験研究 公募締切:2026年8月10日(月)(必着) 着任時期:2027年2月1日以降のできる限り早期 www.ims.ac.jp/recruit/2026...
ims.ac.jp
生命・錯体分子科学研究領域 教授 - 人事公募 | 分子科学研究所
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 10/04/2026
How artificial intelligence is reengineering protein engineering www.science.org/eprint/666XR...
science.org
How artificial intelligence is reengineering protein engineering
Over the past decades, protein engineering has matured into a field of its own, driven by computational modeling and high-throughput wet lab experiments, with broad application in therapeutics, diagnostics, agriculture, and manufacturing. In recent years,...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 06/04/2026
Officially published! Open access! Neck region-microtubule interactions direct counterclockwise stepping of kinesin-1: Biophysical Journal www.sciencedirect.com/science/arti...
sciencedirect.com
Neck region-microtubule interactions direct counterclockwise stepping of kinesin-1
The “neck” region of kinesin is a structurally conserved element critical for force generation, stepping directionality, and cargo transport along mic…
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 04/03/2026
Online full text is available now! Artificial DNA-nano/microparticle motors: Factors governing speed, run-length, and unidirectionality revealed by geometry-based kinetic simulations Takanori Harashima, Ryota Iino www.biorxiv.org/content/10.6... Supporting videos www.biorxiv.org/content/10.6...
biorxiv.org
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 14/02/2026
Takanori’s new preprint is out! We revealed mechanism of particle size-dependent and -independent performance metrics! Artificial DNA-nano/microparticle motors: Factors governing speed, run-length, and unidirectionality revealed by geometry-based kinetic simulations www.biorxiv.org/content/10.6...
biorxiv.org
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 09/02/2026
Kinetic Asymmetry and Directionality of Nonequilibrium Molecular Systems onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com
Kinetic Asymmetry and Directionality of Nonequilibrium Molecular Systems
Ratchet mechanisms allow external energy to drive pumping or directional motion on the ground state. An energy ratchet uses external modulation to destroy correlations present at equilibrium and an i...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 30/01/2026
From sequence to function: Bridging single-molecule kinetics and molecular diversity | Science www.science.org/doi/10.1126/...
science.org
From sequence to function: Bridging single-molecule kinetics and molecular diversity
Biological function is fundamentally determined by nucleic acid and protein sequence. Beyond encoding genetic information, nucleic acids also display complex physicochemical parameters that shape stru...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 25/01/2026
Meta-amplified dark-field interferometric scattering microscopy www.nature.com/articles/s41...
nature.com
Meta-amplified dark-field interferometric scattering microscopy - Nature Communications
We introduce meta-amplified dark-field interferometric scattering microscopy, which uses a plasmonic metasurface to enhance sensitivity and contrast by converting nanoparticle-induced phase perturbati...
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Reposted by Ryota IINO 飯野亮太
Andres Tretiakov @andrestrujado.bsky.social · 13/01/2026
The wonders of Chemistry by @philipcball.bsky.social youtube.com/watch?v=a3Md... #spectacularchem
youtube.com
The Wonders of Chemistry with Philip Ball
YouTube video by Beauty of Science
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 20/01/2026
Cool!
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 20/01/2026
必読。 Programming DNA machines to move Selma Piranej, Luona Zhang, Alisina Bazrafshan, Wenxiao Deng & Khalid Salaita Nature Reviews Chemistry (2026) www.nature.com/articles/s41...
nature.com
Programming DNA machines to move - Nature Reviews Chemistry
The development of DNA-based machines is transforming fields such as drug delivery and biosensing. Here, design strategies are discussed and key performance metrics — speed, force generation, efficien...
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Reposted by Ryota IINO 飯野亮太
Kai Johnsson @kjohnsson.bsky.social · 31/12/2025
A good end to 2025: rhodamine-binders for bioimaging in JACS: pubs.acs.org/doi/10.1021/...
pubs.acs.org
Fast, Bright, and Reversible Fluorescent Labeling of Rhodamine-Binding Proteins
Rhodamine dyes conjugated to targeting ligands can yield exceptionally bright fluorescent probes for live-cell imaging. However, the limited permeability of such rhodamine derivatives restricts their ...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 24/12/2025
A joint research with Fukuda-san, Ando-san, and Otomo-san! 10x faster HS-AFM! Enhancing the imaging rate of high-speed atomic force microscopy using a combination of multiple techniques Shingo Fukuda, Akihiro Otomo, Ryota Iino, Toshio Ando www.biorxiv.org/content/10.6...
biorxiv.org
Enhancing the imaging rate of high-speed atomic force microscopy using a combination of multiple techniques
Protein molecules, while functioning, undergo dynamic conformational changes and interactions with their partners, which can be directly observed by high-speed atomic force microscopy (HS-AFM). Howeve...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 07/12/2025
齊藤博英さんにセミナーをして頂きます!所外からのご参加も歓迎いたします!楽しみです! 講演者:齊藤博英 博士 (東京大学定量生命科学研究所教授, 京都大学iPS細胞研究所教授) 演題:RNA合成生物学を活用した遺伝子発現制御と細胞のプログラミング 日時:2026年1月23日(金) 15:00-16:00 場所:山手キャンパス3号館2階西大会議室 www.ims.ac.jp/research/sem...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 03/12/2025
DNA Motors Powered by Exonuclease III for Autonomous Rolling Motion and Biosensing Applications www.biorxiv.org/content/10.1...
biorxiv.org
DNA Motors Powered by Exonuclease III for Autonomous Rolling Motion and Biosensing Applications
Nucleic acid-based synthetic motors emulate key behaviors of biological machines, enabling applications in biosensing and nanoscale actuation. Among the reported synthetic motors, RNase H-powered moto...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 29/11/2025
Hot Charge Carriers Mediate Regioselective Thiol Cleavage and Biofunctionalization of Gold Nanoparticles | ACS Applied Materials & Interfaces pubs.acs.org/doi/full/10....
pubs.acs.org
Hot Charge Carriers Mediate Regioselective Thiol Cleavage and Biofunctionalization of Gold Nanoparticles
Laser excitation of plasmonic particles represents an attractive avenue to tailor and catalyze surface chemical reactions at the nanoscale. However, it remains unclear how interfacial chemistry is cat...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 22/11/2025
Next week I will attend the 2025 East Asian Single-Molecule Biophysics Symposium and give an invited talk. Thank you very much for the wonderful opportunity! I look forward to reuniting with old friends and meeting new ones! www.physics.nus.edu.sg/easmb2025/
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 22/11/2025
Fluorescent Thermometers Based on Carbon Quantum Dots with Various Detection Modes for Intracellular Temperature Measurement | Nano Letters pubs.acs.org/doi/full/10....
pubs.acs.org
Fluorescent Thermometers Based on Carbon Quantum Dots with Various Detection Modes for Intracellular Temperature Measurement
We report that carbon quantum dots (CQDs) synthesized via a hydrothermal process using anthraquinone derivatives and l-cysteine provide versatile detection modes, making them suitable for various expe...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 22/11/2025
Intracellular Heat Transfer and Thermal Property Revealed by Kilohertz Temperature Imaging with a Genetically Encoded Nanothermometer | Nano Letters pubs.acs.org/doi/10.1021/...
pubs.acs.org
Intracellular Heat Transfer and Thermal Property Revealed by Kilohertz Temperature Imaging with a Genetically Encoded Nanothermometer
Despite improved sensitivity of nanothermometers, direct observation of heat transport inside single cells has remained challenging for the lack of high-speed temperature imaging techniques. Here, we ...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 22/11/2025
Active fluctuations of cytoplasmic actomyosin networks facilitate dynein-driven transport: iScience www.cell.com/iscience/ful...
cell.com
Active fluctuations of cytoplasmic actomyosin networks facilitate dynein-driven transport
Inside cells, molecular motors transport cargo through a highly crowded cytoplasmic environment. While such an environment is assumed to hinder transport, its precise effect remains unclear. Here, we ...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 21/11/2025
Metagenomic editing of commensal bacteria in vivo using CRISPR-associated transposases | Science www.science.org/doi/10.1126/...
science.org
Metagenomic editing of commensal bacteria in vivo using CRISPR-associated transposases
Although metagenomic sequencing has revealed a rich microbial biodiversity in the mammalian gut, methods to genetically alter specific species in the microbiome are highly limited. Here, we introduce ...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 20/11/2025
Virion motility of sialoglycan-cleaving respiratory viruses www.nature.com/articles/s44...
nature.com
Virion motility of sialoglycan-cleaving respiratory viruses - npj Viruses
npj Viruses - Virion motility of sialoglycan-cleaving respiratory viruses
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 20/11/2025
Receptor Density-Dependent Motility of Influenza Virus Particles on Surface Gradients | ACS Applied Materials & Interfaces pubs.acs.org/doi/full/10....
pubs.acs.org
Receptor Density-Dependent Motility of Influenza Virus Particles on Surface Gradients
Influenza viruses can move across the surface of host cells while interacting with their glycocalyx. This motility may assist in finding or forming locations for cell entry and thereby promote cellula...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 13/11/2025
Introduction: Soft Robotics | Chemical Reviews pubs.acs.org/doi/full/10....
pubs.acs.org
Introduction: Soft Robotics
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 11/11/2025
Call for Symposium Proposals. International Conference on Biophysics and Biomedical Sciences (ICBBS2026): The 64th Annual Meeting of the Biophysical Society of Japan and the Federation Meeting of Korean Societies for Biomolecular and Biophysical Sciences www.biophys.jp/news/lib/new...
biophys.jp
International Conference on Biophysics and Biomedical Sciences: The 64th Annual Meeting of the Biophysical Society of Japan and the Federation Meeting of Korean Societies for Biomolecular and Bioph...
Chair of ICBBS2026Sam-Yong Park (Yokohama City University)We are pleased to invite symposium proposals for International Conference on Biophysics and Biomedical Sciences (ICBBS2026).The Biophysical So...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 09/11/2025
Fuel-Free Rolosense: Viral Sensing Using Diffusional Particle Tracking | ACS Sensors pubs.acs.org/doi/full/10....
pubs.acs.org
Fuel-Free Rolosense: Viral Sensing Using Diffusional Particle Tracking
High-sensitivity viral diagnostics typically use PCR to detect and amplify viral nucleic acids which requires fluorescence reporters, enzymatic amplification, specialized equipment and can be time-c...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 06/11/2025
Review Article (Invited) Stress fiber contraction induces cell body rotation in single keratocytes. Chika Okimura Biophysics and Physicobiology, 2025, 22, e220023 www.youtube.com/watch?v=6TSr...
youtube.com
Chika Okimura publishes an article in Biophysics and Physicobiology on 28 October, 2025.
YouTube video by The Biophysical Society of Japan
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 05/11/2025
Plastics recycling is in trouble Consumer product companies have walked back their plastics sustainability goals, and many recyclers are closing their doors cen.acs.org/environment/...
cen.acs.org
Plastics recycling is in trouble
Consumer product companies have walked back their plastics sustainability goals, and many recyclers are closing their doors
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Reposted by Ryota IINO 飯野亮太
BejaLabTechnion @bejalab.bsky.social · 05/11/2025
Functional characterization of red-shifted rhodopsin channels from giant viruses explored by a machine-learning model for long-wavelength optogenetics www.biorxiv.org/content/10.1...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 04/11/2025
The Demon Hidden Behind Life's Ultra-Energy-Efficient Information Processing -- Demonstrated by Biological Molecular Motors Toshio Yanagida, Keisuke Fujita, Mitsuhiro Iwaki arxiv.org/abs/2510.27212
arxiv.org
The Demon Hidden Behind Life's Ultra-Energy-Efficient Information Processing -- Demonstrated by Biological Molecular Motors
The remarkable progress of artificial intelligence (AI) has revealed the enormous energy demands of modern digital architectures, raising deep concerns about sustainability. In stark contrast, the hum...
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Reposted by Ryota IINO 飯野亮太
James Gallagher @jamesgallagher.bsky.social · 03/11/2025
interestingly, we predicted this based on solely macroscopic principles: "Based on the diameters of the input gear and output gear, and assuming an equal density of gear teeth, we can estimate a ttheoretical mechanical advantage (and so [...] a torque multiplication) of ∼6." doi.org/10.1016/j.ch...
doi.org
Redirecting
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 03/11/2025
Torque-generating units of the bacterial flagellar motor are rotary motors "The MotB dimer rotates at the same angular speed as the cell body" "The MotA pentamer rotates ∼6.2x faster than the flagellar motor" 細菌べん毛固定子の回転計測。蛍光偏光褪色を利用。 www.biorxiv.org/content/10.1...
biorxiv.org
Torque-generating units of the bacterial flagellar motor are rotary motors
E. coli swims using helical flagellar filaments driven at their base by a rotary motor. Torque-generating ‘stator’ units drive the bacterial flagellar motor (BFM) by transmitting mechanical power to a...
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Reposted by Ryota IINO 飯野亮太
Sonja Schmid @scisonja.bsky.social · 02/11/2025
Single-molecule friends! The prelim. program of next year's sm- #Gordon conference in Switzerland is online: www.grc.org/single-molec... It'll be 3x fantastic: science, people, place in the alps ⛰️. Kevin & I hope to see you all next June: Have a look, tell your friends, and register!
grc.org
2026 Single Molecule Approaches to Biology Conference GRC
The 2026 Gordon Research Conference on Single Molecule Approaches to Biology will be held in Les Diablerets, Vaud (fr) Switzerland. Apply today to reserve your spot.
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 31/10/2025
The Next Dimension: Digital Holography for 3D Interferometric Scattering | ACS Nano pubs.acs.org/doi/10.1021/...
pubs.acs.org
The Next Dimension: Digital Holography for 3D Interferometric Scattering
We provide detailed experimental guidelines for implementing digital holography in the context of high-sensitivity interferometric scattering (iSCAT)-based nanosizing applications. Our approach relies on interferometry via the highly versatile off-axis implementation of digital holography, which offers key advantages over more traditional strategies. After a brief theoretical discussion of off-axis holography and its differences and similarities with iSCAT, typical experimental implementations and digital data-processing steps are presented. Key experimental parameters and strategies to achieve optimal performance are also highlighted. Following these experimental aspects, we focus on digital postprocessing routines that enable digital refocusing and 3D particle tracking as well as pupil function aberration correction. We then conclude with a few examples highlighting the broad applicability of digital holography for nanosizing and particle characterization applications, as well as an outlook for future applications.
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 18/10/2025
Structures of rotary ATP synthase from Thermus thermophilus during proton powered ATP synthesis | Science Advances www.science.org/doi/10.1126/...
science.org
Structures of rotary ATP synthase from Thermus thermophilus during proton powered ATP synthesis
Cryo-EM snapshots of the ATP synthase driven by proton motive force reveal the torsional deformation during ATP synthesis.
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Reposted by Ryota IINO 飯野亮太
Dean Astumian, OFS @deanast.bsky.social · 05/10/2025
This is a beautiful paper that relates the key idea of kinetic asymmetry, along with the possibility of slip and futile cycling, to understand the performance measures for synthetic molecular machines as well as other non-equilibrium processes coupled to chemical catalysis.
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Reposted by Ryota IINO 飯野亮太
James Gallagher @jamesgallagher.bsky.social · 03/10/2025
The physics of molecular machinery can be confusing. We developed a plug-and-play interactive tool based on trajectory thermodynamics. The user can now visualise how/why motors move directionally or respond to a force (see video), without knowledge of the physics or maths. github.com/JoaquinBaixe...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 05/10/2025
Structure-performance relationships for catalysis-driven molecular machinery: Chem www.cell.com/chem/fulltex...
cell.com
Structure-performance relationships for catalysis-driven molecular machinery
Molecular machine properties such as speed, efficiency, power, and torque depend upon particular features of structure, mechanism, and chemistry. The graphical abstract shows a Top Trumps-style repres...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 19/09/2025
Interpreting molecular ratchets, directionality, and kinetic asymmetry through the work of Curie, Einstein, and Lewis www.nature.com/articles/s42...
nature.com
Interpreting molecular ratchets, directionality, and kinetic asymmetry through the work of Curie, Einstein, and Lewis - Communications Physics
Scalar energy can drive formation of non-equilibrium steady-states or power directional processes such as chemotaxis, ion transport across a membrane, or walking along a polar track. This work focuses...
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Reposted by Ryota IINO 飯野亮太
Dean Astumian, OFS @deanast.bsky.social · 18/09/2025
as an exercise it may be worth considering why the bar-hinge model would work fine when powered by light, but would not work when powered by a chemical reaction unless kinetic asymmetry were incorporated into the design. www.nature.com/articles/s42...
nature.com
Interpreting molecular ratchets, directionality, and kinetic asymmetry through the work of Curie, Einstein, and Lewis - Communications Physics
Scalar energy can drive formation of non-equilibrium steady-states or power directional processes such as chemotaxis, ion transport across a membrane, or walking along a polar track. This work focuses...
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 18/09/2025
A self-assembled nanoscale robotic arm controlled by electric fields | Science www.science.org/doi/10.1126/...
science.org
A self-assembled nanoscale robotic arm controlled by electric fields
An electrically driven DNA origami arm can exert piconewton forces and transport fluorophores and nanoparticles.
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Ryota IINO 飯野亮太 @ryotaiino.bsky.social · 18/09/2025
The bar-hinge motor: a synthetic protein design exploiting conformational switching to achieve directional motility doi.org/10.1088/1367... via @ioppublishing.bsky.social
doi.org
The bar-hinge motor: a synthetic protein design exploiting conformational switching to achieve directional motility - IOPscience
The bar-hinge motor: a synthetic protein design exploiting conformational switching to achieve directional motility, Small, Lara S R, Zuckermann, Martin J, Sessions, Richard B, Curmi, Paul M G, Linke,...
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