Sign in

Davide Ruggero

@ruggerolab.bsky.social
209 followers 217 following 283 posts
PostsRepliesMedia
Reposted by Davide Ruggero
Fusion Conferences @fusionconf.bsky.social · 27/08/2026
Our speaker line-up is almost complete for #TCCO, do you wish to be a part of it? There are several presentation opportunities available at this meeting, send your abstract to amy@fusion-conferences.com before 19 November to be considered. Sign up for updates here - bit.ly/4yAFomu
154
Reposted by Davide Ruggero
Journal of Clinical Investigation @jci.org · 17/07/2026
Here's a peek at the associated Commentary by Carlos Carmona-Fontaine: doi.org/10.1172/JCI1...
022
Reposted by Davide Ruggero
Fusion Conferences @fusionconf.bsky.social · 23/06/2026
We're delighted to announce a brand new meeting series, joining the Fusion community in May 2027. *Translational Control - From Cells to Organisms Conference* 📅Date: 22 - 25 May 2027 🌏Location: Durrës, Albania Sign up for updates to find out more information on the conference: bit.ly/4eGxaQG
174
Davide Ruggero @ruggerolab.bsky.social · 21/05/2026
Transformative work from the @mbarnalab.bsky.social Ribo-Tweezer enables direct interrogation of ribosomal protein (RP) function in mature ribosomes, revealing that distinct RPs control unique translatomes and that RACK1 removal rewires translation and stem cell identity. Congrats to all!
082
Davide Ruggero @ruggerolab.bsky.social · 17/10/2025
A fascinating connection between translation decoding specificity through metabolites that help cells control a vital redox state. Congrats Josh @mendell-lab.bsky.social and Fred! @fred-rehfeld.bsky.social
140
Davide Ruggero @ruggerolab.bsky.social · 13/08/2025
This will be an exciting meeting on many aspects of RNA biology, the impact on tumorigenesis and theraupric implications. Including: Splicing, Noncoding RNA, RNA modifications, Translation, New technologies, RNA and immunology, Protein-RNA assembly, & cancer therapeutics in targeting RNA. Join us!
010
Reposted by Davide Ruggero
Cancer Cell @cp-cancercell.bsky.social · 13/05/2025
Small-molecule RNA therapeutics to target prostate cancer
dlvr.it
Small-molecule RNA therapeutics to target prostate cancer
Kuzuoglu-Ozturk et al. showcase a therapeutic approach, “translatome therapy,” to combat lethal prostate cancer. Zotatifin, a clinical molecule, targets the RNA-helicase eIF4A. Zotatifin decreases the select translation of key oncogenes, androgen receptor (AR), and HIF1α through remodeling their 5′ UTR RNA structure. Zotatifin enhances anti-androgen and radiotherapy sensitivity, highlighting a promising anti-cancer treatment.
093
Reposted by Davide Ruggero
Ly Vu @lyvu.bsky.social · 13/05/2025
Excited to share our first study using nanopore direct RNA seq to comprehensively characterize RNA features. We believe that our deep and high coverage datasets should be a nice resource for the field! www.cell.com/cell-genomic...
cell.com
Nanopore direct RNA sequencing of human transcriptomes reveals the complexity of mRNA modifications and crosstalk between regulatory features
Understanding the interactions between various mRNA features—such as RNA modifications, poly(A) tail length, and splicing—has been highly sought after but remains largely elusive. Here, Kim and Savill...
1104
Reposted by Davide Ruggero
Nature Cell Biology @natcellbio.nature.com · 27/04/2025
🍰Interested in reading more about the study? Here's the N&Vs article written by Joanna R. Kovalski & Davide Ruggero. 👉https://rdcu.be/ejwqJ bit.ly/4jnydWI
bit.ly
Breaking up translation condensates in cancer - Nature Cell Biology
Translational control is emerging as a key regulator of cancer. The RNA-binding protein PABPC1 is shown to drive chronic myeloid leukaemia (CML) by enhancing the translation of pro-oncogenic mRNAs thr...
0104
Reposted by Davide Ruggero
Cancer Cell @cp-cancercell.bsky.social · 25/04/2025
Online Now: Ribosomal rebellion: When protein factories drive cancer progression
dlvr.it
Ribosomal rebellion: When protein factories drive cancer progression
In Cancer Cell, two studies unveil mechanisms by which co-option of the protein synthesis machinery promotes cancer progression and potential therapeutic interventions. Kuzuoglu-Ozturk et al. show that eIF4A-mediated enhancement of oncogenic transcript translation initiation drives cancer progression, while Weller et al. demonstrate how aberrant transfer RNA (tRNA) modification disrupts translational fidelity to produce neoantigens.
052
Davide Ruggero @ruggerolab.bsky.social · 04/04/2025
Fascinating work on noncoding snoRNA sequences on ribosome biogenesis and its implication in cancer cell fitness! Congrats Josh @mendell-lab.bsky.social and team!
040
Davide Ruggero @ruggerolab.bsky.social · 21/03/2025
Thanks Levi Gadye and Laura Kurtzman for the thoughtful and creative press release! @UCSF @UCSFCancer x.com/UCSFCancer/sta…
000
Davide Ruggero @ruggerolab.bsky.social · 20/03/2025
And we couldn't make it without @PCFnews @pcarroll_ and Benioff Initiative for Prostate Cancer Research support! cell.com/cancer-cell/fu…
cell.com
Small-molecule RNA therapeutics to target prostate cancer
Kuzuoglu-Ozturk et al. showcase a therapeutic approach, “translatome therapy,” to combat lethal prostate cancer. Zotatifin, a clinical molecule, targets the RNA-helicase eIF4A. Zotatifin decreases the select translation of key oncogenes, androgen receptor (AR), and HIF1α through remodeling their 5′ UTR RNA structure. Zotatifin enhances anti-androgen and radiotherapy sensitivity, highlighting a promising anti-cancer treatment.
040
Davide Ruggero @ruggerolab.bsky.social · 20/03/2025
Happy to share our new work with @haognguyen on targeting mRNA translation of oncogenes by RNA structure remodeling with a small molecule zotatifin. Congrats to ⁦@DuyguKuzuoglu⁩ an amazing postdoc and all the authors and collaborators! cell.com/cancer-cell/fu…
cell.com
Small-molecule RNA therapeutics to target prostate cancer
Kuzuoglu-Ozturk et al. showcase a therapeutic approach, “translatome therapy,” to combat lethal prostate cancer. Zotatifin, a clinical molecule, targets the RNA-helicase eIF4A. Zotatifin decreases the select translation of key oncogenes, androgen receptor (AR), and HIF1α through remodeling their 5′ UTR RNA structure. Zotatifin enhances anti-androgen and radiotherapy sensitivity, highlighting a promising anti-cancer treatment.
1105
Davide Ruggero @ruggerolab.bsky.social · 13/03/2025
Great tools and tips for the field to study IRES-dependent translation. Beautiful dissection of true HOX IRES translation in developing embryos. Congrats to all @mbarnalab @KatLeppek! x.com/mbarnalab/stat…
020
Davide Ruggero @ruggerolab.bsky.social · 08/03/2025
A tour de force in deciphering in action the intriguing dynamic composition of ribosomes in vivo. Beautiful work! Congrats to all @mbarnalab! x.com/mbarnalab/stat…
000
Davide Ruggero @ruggerolab.bsky.social · 05/02/2025
Thanks Levi Gadye, for the wonderful and insightful highlight of our last publication! @UCSF ucsf.edu/news/2025/02/4…
ucsf.edu
Can Scientists Throw a Wrench into Cancer’s Growth Gears?
UCSF scientists discover how cancer cells hijack the protein factory of the cell to churn out MYC protein, the driver of 70% of all cancers.
000
Davide Ruggero @ruggerolab.bsky.social · 12/12/2024
Congrats @mbarnalab @travisclantz and Christine on this award and making progress on targeting ribosomes to increase protein synthesis! x.com/mbarnalab/stat…
000
Davide Ruggero @ruggerolab.bsky.social · 28/11/2024
Congrats on this beautiful paper on another great link between lipid metabolism and translation control! @DeSiqueiraMK, @ClaudioVillanu, and team! x.com/DeSiqueiraMK/s…
000
Davide Ruggero @ruggerolab.bsky.social · 22/11/2024
Amazing work on uncovering a new role for tRNAs in linking mRNA stability with codon-specific translation! Congrats @Mendell_lab and team!! x.com/Mendell_lab/st…
000
Davide Ruggero @ruggerolab.bsky.social · 22/10/2024
Amazing paper on specialized ribosomes and their roles in cancer immune response! Congrats @liamfaller and all team! t.co/yR2JfIZOTp
000
Davide Ruggero @ruggerolab.bsky.social · 05/10/2024
Thanks @RNACanadaC2R2 for organizing an amazing RNA meeting! x.com/RNACanadaC2R2/…
000
Davide Ruggero @ruggerolab.bsky.social · 11/09/2024
Fantastic collaboration with the @mbarnalab @TheVictoriaHung @AndrewL85556734 Theo and team on ribosome composition in cancer, development and macrophages. @UCSFCancer @ACS_Research @StanfordMed x.com/MolecularCell/…
000
Davide Ruggero @ruggerolab.bsky.social · 14/08/2024
Thanks so much Levi Gadye @UCSFCancer @UCSFMedicine for this wonderful summary of our recent research! x.com/UCSF/status/18…
000
Davide Ruggero @ruggerolab.bsky.social · 07/08/2024
Congrats Daphna @D_Rothschild_ Theo, and team @mbarnalab Beautiful and important work. x.com/D_Rothschild_/…
000
Davide Ruggero @ruggerolab.bsky.social · 25/07/2024
Fascinating work on noncoding snoRNA sequences on ribosome biogenesis! Congrats Josh @Mendell_lab and team! x.com/Mendell_lab/st…
000
Davide Ruggero @ruggerolab.bsky.social · 25/07/2024
Ribosomal protein (rpl40) methylation regulates mRNA translation critical for gastric cancer opening new therapies. Congrats to all! nature.com/articles/s4158…
nature.com
SMYD5 methylation of rpL40 links ribosomal output to gastric cancer
Nature - The lysine methyltransferase SMYD5 and its newly identified substrate ribosomal protein L40 are implicated in the progression of gastric adenocarcinoma, and ablation of SMYD5 prevents...
000
Davide Ruggero @ruggerolab.bsky.social · 15/03/2024
Fascinating work unveiling a specific function of CNOT3 as a key regulator of translation control in cancer. Congrats Ly @Vuphuongly and team! x.com/Vuphuongly/sta…
000
Davide Ruggero @ruggerolab.bsky.social · 18/11/2023
Fascinating work on the interaction between 5’UTR alternative splicing and translation control in cancer and therapy. Congrats @andrei_thomas_t and all collaborators! x.com/andrei_thomas_…
000
Davide Ruggero @ruggerolab.bsky.social · 24/10/2023
Exciting work from @Sorrell_Lab! Congrats to all! x.com/Sorrell_Lab/st…
000
Davide Ruggero @ruggerolab.bsky.social · 05/10/2023
So proud of Joanna @ScientistJoanna! She is an amazing and inspirational scientist. Thanks to the ACS support! @AmericanCancer @ACS_Research @UCSFUrology @UCSFCancer x.com/billdahutmd/st…
000
Davide Ruggero @ruggerolab.bsky.social · 28/07/2023
Fascinating work on illuminating the power of the 3’ untranslated region in post-transcriptional control of cancer genome expression. Congrats @HsiehLab, Samantha and team!! x.com/HsiehLab/statu…
000
Davide Ruggero @ruggerolab.bsky.social · 26/07/2023
One of the most fun and exciting collaborations thanks @OZhulyn @mbarnalab . Intriguing activation of translation in regenerative species that transduce injury stress signaling into a growth stimulus. And these animals are resistant to cancer. @DuyguKuzuoglu @UCSFCancer x.com/mbarnalab/stat…
000
Davide Ruggero @ruggerolab.bsky.social · 17/05/2023
The ribosome revolution, join this exciting meeting. t.co/BqwJhz4Ca8
000
Davide Ruggero @ruggerolab.bsky.social · 21/04/2023
Fascinating and creative work on a new interplay between chromatin remodeling/transcription and translation elongation in cancer & therapeutic implications. Congrats Sujata @SujataJanaPhD and Andrew @HsiehLab and team!! x.com/HsiehLab/statu…
000
Davide Ruggero @ruggerolab.bsky.social · 12/04/2023
Congrats @FKHM and team, on this exciting work unveiling another connection between oncogenic signaling and ribosome biogenesis/post-transcriptional control! x.com/FKHM/status/16…
000
Davide Ruggero @ruggerolab.bsky.social · 06/04/2023
Thanks Florian @KarrethLab for being a such gracious host! I very much enjoyed my visit and I learned a lot. @MoffittNews @CancerBiol_PhD The dinner was great too! @LabDeNicola @ajaeger40 x.com/KarrethLab/sta…
000
Davide Ruggero @ruggerolab.bsky.social · 02/03/2023
Fascinating work on studying RNA binding protein networks. Congrats @khorms57 @FKHM @halfacrocodile x.com/khorms57/statu…
000
Davide Ruggero @ruggerolab.bsky.social · 18/02/2023
For old and new ribosome lovers this will be an exciting meeting. x.com/mbarnalab/stat…
000
Davide Ruggero @ruggerolab.bsky.social · 03/02/2023
Beautiful work on new insights into eIF4A RNA helicase activity. Congrats Adrianna @ILikeHelicases @TobiSch_lab and team! x.com/ILikeHelicases…
000
Davide Ruggero @ruggerolab.bsky.social · 02/02/2023
An impressive tour de force analysis unveils exciting variation in ribosomal RNA sequences and the formation of ribosome variants. And cancer cells love rRNA variation. Congrats Daphna ⁦@D_Rothschild_⁩ ⁦@mbarnalab⁩ and collaborators! biorxiv.org/content/10.110…
biorxiv.org
A comprehensive rRNA variation atlas in health and disease
The hundreds of copies of ribosomal-DNA genes are the dark-matter of the human genome as it is unknown whether they possess sequence variation that forms different types of ribosomes. Here, we have overcome the technical hurdle of long-read sequencing of full-length ribosomal-RNA (rRNA) and developed an efficient algorithm for rRNA-variant detection. We discovered hundreds of variants that are not silent but are incorporated into translating ribosomes. These include tens of abundant variants within functionally important domains of the ribosome. Strikingly, variants assemble into distinct ribosome subtypes encoded on different chromosomes. With this first atlas of expressed rRNA-variants, we discover the impact of rRNA variation on health and disease. Across human tissues, we observe tissue-specific variant expression in endoderm/ectoderm derived tissues. In cancer, low abundant rRNA-variants become highly expressed. Together, this study provides a curated atlas for exploring rRNA variation and functionally links ribosome variation to tissue-specific biology and cancer. ### Competing Interest Statement The authors have declared no competing interest.
010
Davide Ruggero @ruggerolab.bsky.social · 02/02/2023
Love for the ribosome. Great piece that Stanford wrote on the Barna lab journey. x.com/StanfordMed/st…
000
Davide Ruggero @ruggerolab.bsky.social · 01/02/2023
Fascinating mechanistic work on how RNA viruses such as the SARAS-CoV2 hijack the translation machinery to produce more proteins from 1 mRNA. Congrats ⁦@Mendell_lab⁩ ⁦@jschoggins⁩ Frederick and team! cell.com/cell-reports/f…
cell.com
CRISPR screening reveals a dependency on ribosome recycling for efficient SARS-CoV-2 programmed ribosomal frameshifting and viral replication
Programmed ribosomal frameshifting is essential for SARS-CoV-2 replication. Through genome-wide CRISPR screening, Rehfeld et al. find a requirement for ribosome recycling factors in efficient frameshifting and viral replication. The unique position of the ORF1a stop codon in SARS-CoV-2 necessitates the efficient removal of post-termination ribosomes to enable frameshifting of trailing ribosomes.
010
Davide Ruggero @ruggerolab.bsky.social · 12/01/2023
Cells need to maintain proteostasis. Spectacular work from the Taunton lab identify a new ubiquitin-mediated surveillance pathway that monitors ribosome stalling and A site occupancy in elongation & termination. Congrats Jack and ⁦@keely_oltion⁩! cell.com/cell/fulltext/…
cell.com
An E3 ligase network engages GCN1 to promote the degradation of translation factors on stalled ribosomes
Oltion et al. unveil a ubiquitin ligase network in charge of ensuring translation factor quality control in response to stalled ribosomes.
000
Davide Ruggero @ruggerolab.bsky.social · 07/01/2023
Check out this exciting work on codon usage and translation reprogramming as a driver of cancer evolution! Congrats Sohail @SohailTavazoie @DennisJHsu and team! x.com/SohailTavazoie…
000
Davide Ruggero @ruggerolab.bsky.social · 24/12/2022
Congrats Craig ⁦@Forester_lab superstar postdoc who led a fascinating study on how specialized translation underlies a differentiation program of red blood cells. Thanks to ⁦@sohitmiglani⁩ ⁦@mbarnalab⁩ Al Burlingame Juan Oses and all team! science.org/doi/10.1126/sc…
science.org
Regulation of eIF4E guides a unique translational program to control erythroid maturation
eIF4E guides a unique mechanism of specific gene expression in quiescent blood precursors to retain early, immature states.
000
Davide Ruggero @ruggerolab.bsky.social · 23/12/2022
Albertas one of the most impactful new-generation RNA biologist I have worked with. Albertas @a_navickas congrats!! x.com/RNASociety/sta…
000
Davide Ruggero @ruggerolab.bsky.social · 19/12/2022
Very proud of a brilliant postdoc Duygu @DuyguKuzuoglu, who along with Ozlem (Weiss lab) and @GestwickiLab @UCSFCancer discovered how N-Myc leads to brain cancer by establishing a drugable protein homeostasis program coupling mRNA translation and protein folding. @ACS_Research x.com/DuyguKuzuoglu/…
000
Davide Ruggero @ruggerolab.bsky.social · 15/12/2022
Another beautiful study of how ribosomal heterogeneity at the atomic level shapes tissue organogenesis and specialized translation control. nature.com/articles/s4158…
nature.com
A male germ-cell-specific ribosome controls male fertility
Nature - RibosomeST—a ribosome with a specialized nascent polypeptide exit tunnel—cotranslationally regulates the folding of a subset of male germ-cell-specific proteins that are...
000
Davide Ruggero @ruggerolab.bsky.social · 13/12/2022
Fascinating work on how cancer cells usurp the “degeneracy” of the genetic code to build their proteome. Congrats Lisa Noble, ⁦@SohailTavazoie⁩ ⁦@genophoria⁩ and team! nature.com/articles/s4301…
nature.com
Two isoleucyl tRNAs that decode synonymous codons divergently regulate breast cancer metastatic growth by controlling translation of proliferation-regulating genes
Nature Cancer - Earnest-Noble et al. report the opposing regulation during breast cancer metastasis of two isoleucyl tRNAs that decode synonymous codons, leading to divergent regulation of...
000