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ramankhannasf.bsky.social

@ramankhannasf.bsky.social
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
#Amplify2026 Overall great session on using LLM APIs. Basically, so you can conceptually copy paste on loop into ChatGPT thousands of times rather than one at a time. Looking forward to trying it soon!
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Pretty packed!
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Now downloading the file. So you can see the logic: Get raw data (notes, meds, whatever); write a prompt to analyze the data in the LLM; then hit the LLM API again and again with a loop, then download the output.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Working our way slowly up--hello world, test the key, call the API, try feeding data into the API, now looping through API calls.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
THE KEY IS WORKING
static.klipy.com
Key in Door Lock - A Christmas Carol
ALT: Key in Door Lock - A Christmas Carol
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Incidentally, using GoogleCollab is a really useful way to walk people through the code calls involved--(1) explanation (2) code block (3) response. Of course, need to ensure data is deidentified,but great place to practice.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
static.klipy.com
Iceman's Iconic Wingman Line in Top Gun
ALT: Iceman's Iconic Wingman Line in Top Gun
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Tension building as everyone is asking the same question… who’s the best (at LLM APIs)
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Where do LLM APIs come in? You can paste one note at a time into an LLM. But that will take forever. Using an API you can send all the notes, one after another, until you're done.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Another use case: Use LLMs to look through patient charts to screen them for high risk eligibility. Yet another use case: have not just one but MULTIPLE LLMs read a chart for accuracy.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
First use case--lung nodules are listed in free text in radiology reports. We want to know--how big are they, how concerning are they, when should the patient be rescanned if ever? You could do this by hand--or you could have an LLM read 28,000 CT scans in 12 hours and go have (many) cups of coffee
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/05/2026
Here at AMIA Amplify #amplify2026 and super excited for this first session with the UCSF fellows and alumni Drs. Sharma, Kashani, Danesh, and Blebea--where we'll learn about how to use LLM APIs!
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 26/08/2025
PS--Please check out "why do a CI fellowship" from the acif website: www.acifellows.org/whycifellows...
acifellows.org
Why CI Fellowship? | ACIF: AMIA Clinical Informatics Fellows
Learn why fellows choose to commit two years towards a clinical informatics fellowship and how it can propel you into a career as a physician informatician.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 26/08/2025
Wanted to again re-plug--CI fellowship applications are open! Please go to the ERAS website to apply. students-residents.aamc.org/applying-fel... UCSF's deadline is coming up soon, but there's still time!
students-residents.aamc.org
Apply to Fellowships with the ERAS® System
ERAS® is an online service that transmits applications and supporting documentation for U.S. fellowship positions.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 26/08/2025
Link here: sciencedirect.com/science/arti... and of course, obligatory to mention that Clinical Informaticians should be leading the charge!
sciencedirect.com
Unprepared and overwhelmed: A case for clinician-focused AI education
This perspective illustrates the need for improved AI education for clinicians, highlighting gaps in current approaches and technical content. It advo…
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 26/08/2025
Interesting perspective by UW student Nadia Siddiqui (and many CI leaders and alums including @techmd4thekids.bsky.social and Ellen Kim) on the ubiquity of AI having reached the clinical setting. Several recommendations on what we should be teaching our clinicians.
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ACIF @acifellows.bsky.social · 11/07/2025
If you have ever wondered what Clinical Informatics is, this equation sums it perfectly! Applications for the fellowship program are now open! Here's a handy guide outlining the application timeline and to-dos www.acifellows.org/roadmap #clinicalinformatics #clinformatics
acifellows.org
Roadmap for Application | ACIF: AMIA Clinical Informatics Fellows
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 10/07/2025
More links to important sites that have information. First, our professional association AMIA: amia.org/community/wo... and second, the amazing CI fellows nationwide have their own organization and a website for CI, including for future fellows: www.acifellows.org
amia.org
Working Group
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 10/07/2025
A quick link to an old thread about all the great work CI fellows (not just ours at UCSF) do: bsky.app/profile/rama... - if this sounds interesting, think about applying!
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 10/07/2025
Deadlines vary, but for us at UCSF it's August 29. (clinicalinformaticsfellowship.ucsf.edu/how-apply)
clinicalinformaticsfellowship.ucsf.edu
How to Apply | Clinical Informatics Fellowship
The UCSF Clinical Informatics Fellowship (CIF) is a two year program for physicians who have successfully completed any ACGME/ABMS residency and who wish to develop and advance a professional and prim...
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 10/07/2025
If you're a trainee, and you're interested in this field--application season just started! There's plenty of time. Most CI programs work through ERAS. students-residents.aamc.org/applying-fel...
students-residents.aamc.org
Apply to Fellowships with the ERAS® System
ERAS® is an online service that transmits applications and supporting documentation for U.S. fellowship positions.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 10/07/2025
As we all know from our clinical work, the computer can both be a huge asset and a liability--the job of the informaticist is to maximize the former and minimize the latter. (original publication: pubmed.ncbi.nlm.nih.gov/19074294/ )
pubmed.ncbi.nlm.nih.gov
A "fundamental theorem" of biomedical informatics - PubMed
This paper proposes, in words and pictures, a "fundamental theorem" to help clarify what informatics is and what it is not. In words, the theorem stipulates that a person working in partnership with a...
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 10/07/2025
A quick reminder to all doctors--there's this great field called clinical informatics. What is clinical informatics? To use the best definition, from Charles Friedman--it's to MAKE this equation true: A doctor with a computer > doctor alone.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 22/05/2025
Several CI alums have become ACMIOs or CMIOs in their own right--you won't regret giving these incredibly talented trainees an opportunity to help you transform your clinical environment. cc @techmd4thekids.bsky.social @vlily.bsky.social
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 22/05/2025
And finally--if you're a CMIO/CIO hoping to implement a new EHR module, 3rd party tool, AI scribe, inbasket burden solution, etc--HIRE OUR FELLOWS. The 3200 hours of CI training they get prepares them well to be your boots on the ground, and leaders in their own right.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 22/05/2025
If you're a current fellow, make sure you update acifellows.org with your best work, and that you learn to showcase your projects. Get ideas for what others are doing and what you might try yourself. And collaborate!
acifellows.org
Home | Clinical Informatics
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 22/05/2025
If you are a resident looking to improve the EHR--or build a new one!--consider a CI fellowship! No better way to learn how to optimize and innovate using the full suite of informatics tools, and we'd love to train you. Apply through ERAS in July.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 22/05/2025
Had to leave #CIC25 early. But very impressed by the great work CI fellows are doing, across the country. From LLM based research, to persona creation, to more traditional clinical research, to EHR operations... they are truly the future of #whatisclinicalinformatics
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Sristi Sharma, MD MPH 🇮🇳🇺🇸 @drsristisharma.bsky.social · 21/05/2025
@cflanaganmd.bsky.social @ramankhannasf.bsky.social @julia-adler-mils.bsky.social
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Sristi Sharma, MD MPH 🇮🇳🇺🇸 @drsristisharma.bsky.social · 21/05/2025
Thank you all at #CIC25 for stopping by during the poster session Follow below to learn more about all the informatics work being done at UCSF. @ucsfdocit.bsky.social #Clinformatics #ClinicalInformatics #MedSky
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Applied Clinical Informatics Journal @aci-journal.medsky.social · 24/03/2025
ICYMI: Structure and Funding of Clinical #Informatics Fellowships: A National Survey of Program Directors www.thieme-connect.com/products/ejo... #MedSky #MedEd @techmd4thekids.bsky.social @culehmann.bsky.social
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Reposted by @ramankhannasf.bsky.social
UCSF DoC-IT @ucsfdocit.bsky.social · 18/03/2025
Happy 10th anniversary of ACGME-accredited CI fellowships! Scroll through this thread from @ramankhannasf.bsky.social, DoC-IT’s CI fellowship director, for more on our program and fellows! @amiainformatics.bsky.social @julia-adler-mils.bsky.social @bobwachter.bsky.social
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/03/2025
5/5 Channeling Archimedes - many thanks to all @ucsfdocit.bsky.social and @ucsfhealth.bsky.social and elsewhere who have given our fellows a place to stand and to build their long levers as they seek to move the clinical world.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/03/2025
4/X In 2023 our fellowship moved under a new Division, docit.ucsf.edu Under the leadership of @julia-adler-mils.bsky.social we've seen our fellows reach a wider audience and do even greater things, including with @lisarotenstein.bsky.social, @sumantranji.bsky.social, and A Jay Holmgren.
docit.ucsf.edu
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/03/2025
3/X Our fellows have gone on to great success and leadership positions in academics—both research and CMIO track—as well as industry. You can see some of their stories here: clinicalinformaticsfellowship.ucsf.edu/our-people/a...
clinicalinformaticsfellowship.ucsf.edu
Alumni | Clinical Informatics Fellowship
2022-2024 ​
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/03/2025
2/X Our fellows are prolific. Tagging two early fav pubs –how much of a note is copied (spoiler – a lot!) pubmed.ncbi.nlm.nih.gov/28558106/ and what CI Fellows were doing during the early part of COVID (spoiler—also a lot!) pubmed.ncbi.nlm.nih.gov/33164076/
pubmed.ncbi.nlm.nih.gov
Characterizing the Source of Text in Electronic Health Record Progress Notes - PubMed
This study analyzes inpatient progress notes to determine the documentation practices of medical students, residents, and hospitalists.
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/03/2025
1/X First, many thanks to the folks who had the vision to start the fellowship here-- @bobwachter.bsky.social, Dave Avrin, Mike Blum, Brad Sharpe, Margaret Fang, Talmadge King, @atulbutte.bsky.social butte.bsky.social, @idasim.bsky.social. Thank you all for your initial and ongoing support!
butte.bsky.social
Bluesky
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ramankhannasf.bsky.social @ramankhannasf.bsky.social · 18/03/2025
Really appreciate Jonathan’s posts and wanted to add that UCSF is so incredibly proud of its CI fellows clinicalinformaticsfellowship.ucsf.edu! I wanted to add a few thoughts, too.
clinicalinformaticsfellowship.ucsf.edu
Clinical Informatics Fellowship | Clinical Informatics Fellowship
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Reposted by @ramankhannasf.bsky.social
techmd4thekids.bsky.social @techmd4thekids.bsky.social · 18/03/2025
🚨 10 things you might not know about Clinical Informatics (CI) Fellowships 🚨 In honor of the 10th anniversary of ACGME-accredited CI fellowships, here’s what makes this specialty so unique. 🧵👇
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