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Quentin Mauvisseau

@quentinmauvisseau.bsky.social
311 followers 198 following 6 posts
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Reposted by Quentin Mauvisseau
Bento Bio 🧬 @bento.bio · 23/04/2026
𝗙𝗿𝗼𝗺 𝘀𝗮𝗺𝗽𝗹𝗲 𝘁𝗼 𝗶𝗻𝘀𝗶𝗴𝗵𝘁, 𝗼𝗻 𝘀𝗶𝘁𝗲: Another great example of off-grid science, this time in the fjords of Norway & a training course in Brazil. The international team field tested a fully portable, off-grid eDNA metabarcoding pipeline using Bento Lab & a @nanoporetech.com MinION sequencer.
biorxiv.org
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Reposted by Quentin Mauvisseau
Micah Dunthorn @micahdunthorn.bsky.social · 17/04/2026
Quick taxonomic assignment of Nanopore metabarcoding data
github.com
GitHub - frederic-mahe/nf-pore2taxa: quick taxonomic assignment of Nanopore metabarding data
quick taxonomic assignment of Nanopore metabarding data - frederic-mahe/nf-pore2taxa
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Quentin Mauvisseau @quentinmauvisseau.bsky.social · 03/04/2026
New preprint out! Following two international courses in Brazil and Norway, we show that eDNA metabarcoding can be done fully on-site with portable tools, delivering fish and elasmobranch results in just days, even outside a traditional lab www.biorxiv.org/content/10.6... @jonready.bsky.social
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Reposted by Quentin Mauvisseau
The Mariani Lab @marianilab.bsky.social · 30/03/2026
Out now and led by the impeccable GJ Jeunen: a new way to squeeze #eDNA sequences from preserved natural samplers! NO need to damage the old specimens: just take out the DNA leached into the ethanol! Also: we have a new entry into the #nsDNA world: #bryozoa! onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
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Reposted by Quentin Mauvisseau
Andy Foote @andrewfoote.bsky.social · 13/03/2026
@ UiO masters students: Applications are now open for the field course “Use of Environmental DNA to Assess Marine Fishery and Fish-farm Health,” which will be taught in Brazil. www.forbio.uio.no/events/cours... Contact: @micahdunthorn.bsky.social if you have any questions.
forbio.uio.no
MSc course: “Use of Environmental DNA to Assess Marine Fishery and Fish-farm Health” - ForBio
Read this story on the University of Oslo's website.
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Reposted by Quentin Mauvisseau
Siri Birkeland @siribirkeland.bsky.social · 15/01/2026
Just noticed that our paper is on the cover of Trends in Plant Science - that was unexpected 😅 The illustration is really cool 💙
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Reposted by Quentin Mauvisseau
Dr.Kat Stewart @ecoevoedna.bsky.social · 20/12/2025
🔥 Hot off the press: ever wonder if you could get demographic info for natural pops with #eDNA #environmentalDNA? Well wonder no more! First proof of principle for sex-ratios coming to a computer screen near you: onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
Unlocking Demography: Developing an eDNA‐Based Toolkit to Measure Sex Ratios From Populations
Demographic information, such as sex ratios, is essential for understanding population dynamics and informing conservation strategies. Yet obtaining sex ratios in natural populations can be challengi....
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Reposted by Quentin Mauvisseau
Ang (Angela) McGaughran @angmcgaughran.bsky.social · 31/10/2025
A Conversation piece on our (@manpreetkdhami.bsky.social @sbirdy.bsky.social) quirky fake spiderweb research for eDNA biomonitoring, just out in time for Halloween. Paper forthcoming! theconversation.com/spiders-insp...
theconversation.com
Spiders inspired biologists to create artificial webs to capture airborne DNA for biodiversity monitoring
Natural spiderwebs are good at capturing DNA from the environment, but artificial webs are cheap and provide better control – without harm to spiders.
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Reposted by Quentin Mauvisseau
Manpreet Dhami @manpreetkdhami.bsky.social · 31/10/2025
Such a fun study with awesome collaborators! Read the news release ahead of the paper on how fake webs yielded real eDNA hits. Happy Halloween 👻
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Reposted by Quentin Mauvisseau
Florian Altermatt @florianaltermatt.bsky.social · 29/09/2025
In massive #collaborative #effort, we assembled published & unpublished #fish 🐟 #eDNA 🧬 metabarcoding datasets, covering ~2000 sampling sites/>100 river systems globally. 🐟 🐠 🐡 🌐 🌍 Now results out in 2 #parallel #preprints @biorxiv-ecology.bsky.social #aquatic #biodiversity #meta-analysis 1/6🧵
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Bettina Thalinger @bettinathal.bsky.social · 29/04/2025
#eDNA #eRNA #omics people: would you support the formation of a European Society for Environmental Omics #ESEO? Please share your thoughts in the questionnaire & spread this message! 🙏 Thank you, the ESEO core team! docs.google.com/forms/d/e/1F...
docs.google.com
European Society for Environmental Omics (ESEO)
Dear Environmental Omics enthusiasts! At the AquaEcOmics meeting in Evian (March, 2025), an international group of 35 experts discussed the future of regular European meetings and collaborative effor...
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Reposted by Quentin Mauvisseau
Moler @envdna.bsky.social · 20/03/2025
Development of universal PCR primers for the environmental DNA metabarcoding of cephalopod (Mollueca) diversity #eDNA #environmentalDNA www.sciencedirect.com/science/arti...
sciencedirect.com
Development of universal PCR primers for the environmental DNA metabarcoding of cephalopod (Mollueca) diversity
Cephalopods play crucial roles in marine ecosystems, acting as both predators and prey for apex predators, thereby contributing to the distribution of…
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Reposted by Quentin Mauvisseau
Bettina Thalinger @bettinathal.bsky.social · 20/03/2025
Rein Brys providing amazing examples for #eDNA as an #invasive species detection tool! #aquaecomics @aquaecomics.mastodon.social.ap.brid.gy
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Reposted by Quentin Mauvisseau
Moler @envdna.bsky.social · 16/03/2025
Geographical variation in mitogenomes of the largetooth sawfish Pristis pristis: challenges and perspectives for conservation efforts #eDNA #environmentalDNA www.biorxiv.org/content/10.1...
biorxiv.org
Geographical variation in mitogenomes of the largetooth sawfish Pristis pristis: challenges and perspectives for conservation efforts
Sawfishes (Pristidae) have been severely impacted by coastal development and unregulated fisheries and are considered Critically Endangered by the IUCN Red List. Environmental DNA (eDNA) analyses have...
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Reposted by Quentin Mauvisseau
Jonathan Ready @jonready.bsky.social · 27/02/2025
Local genetic reference sequences can be essential for species specific studies. Applying what worked for a species elsewhere in the world (in this case largetooth sawfish, Pristis pristis) may not work where you are!!! www.biorxiv.org/content/10.1...
biorxiv.org
Geographical variation in mitogenomes of the largetooth sawfish Pristis pristis: challenges and perspectives for conservation efforts
Sawfishes (Pristidae) have been severely impacted by coastal development and unregulated fisheries and are considered Critically Endangered by the IUCN Red List. Environmental DNA (eDNA) analyses have...
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Reposted by Quentin Mauvisseau
Will Anderson @willaanderson.bsky.social · 17/12/2024
A Preprint for our ~$40 USD, open source, 3D printed DNA Fluorometer, the #DIYNAFLUOR, has just been posted to bioRxiv outlining its performance and applications for #eDNA analysis!🦕🧪🧬 A big thanks to all the co-authors! Preprint www.biorxiv.org/content/10.1... Git tinyurl.com/yfh33dsx #science
biorxiv.org
DIYNAFLUOR: An Affordable DIY Plug-and-Play Nucleic Acid Fluorometer for eDNA Quantification in Resource Limited Settings
Nucleic Acid (NA) fluorometry is widely employed for quantifying environmental DNA (eDNA) samples and their downstream DNA sequencing libraries, owing to its sensitivity, accuracy, and speed. However,...
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Reposted by Quentin Mauvisseau
Reindert Nijland @reindertn.bsky.social · 11/02/2025
Super happy our paper on #eDNA #metabarcoding of North Sea fish using @nanoporetech.com sequencing is finally published in Molecular Ecology Resources: onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
The Long and the Short of It: Nanopore‐Based eDNA Metabarcoding of Marine Vertebrates Works; Sensitivity and Species‐Level Assignment Depend on Amplicon Lengths
To monitor the effect of nature restoration projects in North Sea ecosystems, accurate and intensive biodiversity assessments are vital. DNA-based techniques and especially environmental (e)DNA metab....
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Reposted by Quentin Mauvisseau
eDNA-OPTIMA @edna-optima.bsky.social · 10/02/2025
We officially kicked-off eDNA-OPTIMA. In this project, we deploy samplers on a USV, improve detection of benthic invertebrates, aim to understand how eDNA is transported by ocean currents, etc. @vliznews.bsky.social @kuleuvenuniversity.bsky.social @naturalsciences-be.bsky.social @vlaio.bsky.social
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Reposted by Quentin Mauvisseau
Pascal Hablützel @pascalhabluetzel.bsky.social · 10/02/2025
I'm very proud to coordinate this project with this fantastic team. We will gain a lot of insights in how to optimize the use of eDNA for species detection in a complex coastal ecosystem.
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Quentin Mauvisseau @quentinmauvisseau.bsky.social · 10/02/2025
www.biorxiv.org/content/10.1...
biorxiv.org
Investigating the dynamics of the aquatic community in Oslofjord through time series analysis of eDNA
Understanding temporal dynamics of marine communities is critical for assessing ecosystem health and guiding conservation efforts. Here, we conducted a survey using environmental DNA (eDNA) metabarcod...
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Reposted by Quentin Mauvisseau
Micah Dunthorn @micahdunthorn.bsky.social · 23/01/2025
Registration is now open for the ForBio/UiO course “Bioinformatics for environmental DNA sequencing” @biovitenskap.bsky.social @drhyfe.bsky.social @krabberod.bsky.social @ramalok.bsky.social www.forbio.uio.no/events/cours...
forbio.uio.no
ForBio and UiO/IBV course: Bioinformatics for environmental DNA sequencing - ForBio
Read this story on the University of Oslo's website.
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Quentin Mauvisseau @quentinmauvisseau.bsky.social · 20/11/2024
www.biorxiv.org/content/10.1...
biorxiv.org
eDNA replicates, polymerase and amplicon size impact inference of richness across habitats
Environmental DNA-based monitoring has been increasingly used in the last decade to monitor biodiversity in aquatic and terrestrial systems. Molecular-based surveys now allow quick and reliable produc...
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