iiinova — where your digital self keeps evolving

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Johannes Rainer @jorainer.bsky.social · 20/05/2026

Today @philouail.bsky.social received the Open Research Award from Eurac Research for her contributions to open and collaborative #metabolomics . Very well deserved! 💪🥳 #proudPI

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Johannes Rainer @jorainer.bsky.social · 07/01/2026

let's get the community rolling 💪! Thanks to Vilhelm Suksi from @antagomir.bsky.social 's group for the contribution of the notame vignette 🙌

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Phili @philouail.bsky.social · 07/01/2026

🚀 New release: Metabonaut v1.4.0 is here! 1️⃣ New integration with the notame package for robust feature selection. 2️⃣ Added GNPS2 FBMN export for molecular networking. Explore the updates: rformassspectrometry.github.io/Metabonaut/ #Metabolomics #RStats #OpenScience #MassSpec #Bioconductor

rformassspectrometry.github.io

Exploring and Analyzing LC-MS Data

This resource hosts tutorials and end-to-end workflows describing how to analyze LC-MS/MS data, from raw files to annotation, using Bioconductor packages.

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Johannes Rainer @jorainer.bsky.social · 26/06/2025

Philippine @philouail.bsky.social presenting #xcms , summary of 20 years development and recent extensions at the #MetSoc2025 conference! #ProudPI 😎 #rstats @bioconductor.bsky.social #metabolomics #MassSpectrometry

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Florian Huber @me-datapoint.bsky.social · 26/06/2025

@jorainer.bsky.social and @philouail.bsky.social gave a great overview of the ecosystem around #RforMassSpectrometry and #XCMS! #MetSoc25 I am super glad they now also provide options to combine with #Python and #matchms (thanks🙏)

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Phili @philouail.bsky.social · 04/06/2025

🚀 New in Metabonaut: tested xcms on a 4,000+ sample LC-MS dataset — all on a laptop! 💻 Fully reproducible + now possible thanks to dev improvements in xcms. Vignette: rformassspectrometry.github.io/Metabonaut/a... Big thanks to @jorainer.bsky.social #RStats #MassSpec #OpenScience #Metabonaut

rformassspectrometry.github.io

Large Scale Data Preprocessing with xcms

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Johannes Rainer @jorainer.bsky.social · 18/04/2025

Work from @philouail.bsky.social with contributions from William Kumler, Pablo Vangeenderhuysen and Carl Brunius! Thanks! 🥳

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James Milner @jameslmilner.com · 23/02/2025

One thing maybe not discussed enough is the long term opportunity cost of not investing and supporting open source software. Imagine the more and better Blenders, GIMPs, Firefoxs, InkScapes, QGISs etc we would of had (+ could have) if open source was taken more seriously by government and businesses

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Marine Tondelier @marinetondelier.fr · 11/04/2025

Je ne ferai pas de starter pack. Ni de dessins copiant Ghibli sans l'autorisation de Miyazaki. Ces images générées par IA sont irrespectueuses pour des artistes déjà précaires. Et c'est un gouffre énergétique insensé. Je préfère qu'il reste de l'eau et de l'art à nos enfants.

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Phili @philouail.bsky.social · 11/04/2025

Combine R + Python seamlessly for LC-MS/MS annotation using #SpectriPy 🧬 Fully reproducible with public #MetaboLights data 🔗 rformassspectrometry.github.io/Metabonaut/a... #RStats #MassSpec

rformassspectrometry.github.io

LC-MS/MS Data Annotation using R and Python

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Phili @philouail.bsky.social · 31/03/2025

🚀 Starting the week by sharing Metabonaut: rformassspectrometry.github.io/Metabonaut/ A collection of comprehensive tutorials for LC-MS/MS data analysis in R! Learn raw data processing, annotation & stats with xcms, RforMassSpectrometry & Bioconductor—all reproducible & community-driven! #rstats

rformassspectrometry.github.io

Exploring and Analyzing LC-MS Data

This resource hosts tutorials and end-to-end workflows describing how to analyze LC-MS/MS data, from raw files to annotation, using Bioconductor packages.

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