iiinova — where your digital self keeps evolving

PathoGenOmics Lab @pathogenomics.bsky.social · 02/10/2026

Aun estáis a tiempo de ver el espectáculo de danza contemporánea y circo que ha puesto en marcha Álvaro Chiner. Nos cuenta lo sucedido durante una gran epidemia de forma exquisita y sugerente. Vale mucho la pena.

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PathoGenOmics Lab @pathogenomics.bsky.social · 25/09/2026

Participaremos en el espectáculo de arte y ciencia VirArt organizado por Álvaro Chiner en @teatremusical.bsky.social. @gvafisabio.bsky.social @dicv.csic.es @cipfvalencia.bsky.social

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PathoGenOmics Lab @pathogenomics.bsky.social · 02/04/2026

Un momento dulce compartiendo la mona de Pascua con los compañeros. Tradiciones que unen y alegran el día. @i2sysbio.es @paururo.bsky.social @ahmig.es

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PathoGenOmics Lab @pathogenomics.bsky.social · 30/03/2026

The toolkit integrates multiple modules in one workflow: Train / Predict for lineage classification, Split FASTQ / Classify for genotyping from reads or assemblies, and Match Ref to identify the closest reference genome for each sample.

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PathoGenOmics Lab @pathogenomics.bsky.social · 30/03/2026

Pathotypr supports all 14 currently recognised MTBC lineages, including human-adapted lineages L1-L10 and animal-adapted clades A1-A4. It also incorporates recently described diversity such as L10, helping standardise TB genomic surveillance across settings.

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PathoGenOmics Lab @pathogenomics.bsky.social · 24/03/2026

🔬 World TB Day 2026 — Behind the mask, inside BSL-3. Our team works daily to understand M. tuberculosis evolution, resistance & transmission through genomics. TB still kills 1.25M people/year. Research matters. @i2sysbio.es #WorldTBDay #EndTB #Tuberculosis

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PathoGenOmics Lab @pathogenomics.bsky.social · 11/03/2026

Happy Bioinformatics Day!🧬💻Celebrate the power of data for understanding life at every level. In @pathogenomics.bsky.social we combine experiments with bioinformatics to understand bacterial evolution, virulence, and infection dynamics. #SoyBioinformatica @paururo.bsky.social @ahmig.es @i2sysbio.es

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PathoGenOmics Lab @pathogenomics.bsky.social · 10/03/2026

@i2sysbio.es 10th Aniversary Celebration, science and fun!

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PathoGenOmics Lab @pathogenomics.bsky.social · 10/03/2026

Proud to celebrate 10th anniversary of @i2sysbio.es 🎉 Being part of a community dedicated to discovery, collaboration, and advancing science is truly inspiring. Grateful to contribute, learn, and grow alongside such passionate colleagues. Here’s to many more years of knwledge and impact! 🔬✨

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PathoGenOmics Lab @pathogenomics.bsky.social · 04/03/2026

¿Quieres un impulso a tu formacion investigadora🔬? En @i2sysbio.es ofertamos beca JAE Intro @amrhubcsic.bsky.social al. Plan formativo "Frenar la adquisición de resistencia en bacterias patógenas💊". 6 meses remuneración de 600 €/mes. Aplica antes del 10 marzo en www.convocatorias.csic.es/convoca/

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PathoGenOmics Lab @pathogenomics.bsky.social · 16/10/2025

Come and join us in Valencia next January for the meeting of the Spanish Society of Evolutionary Biology. Deadline for abstracts October 22nd. sesbe2026.es/registration/

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PathoGenOmics Lab @pathogenomics.bsky.social · 14/07/2025

Spanish Society Evolutionary Biology meeting January 2026 in the botanical Garden ‪@uv.es‬ in Spain. Registration 200-350€. Preliminary program with confirmed keynote speakers: sesbe2026.es/programme/. Abstract submission until September 15th. sesbe2026.es/abstract/. Come to Valencia and join us!

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PathoGenOmics Lab @pathogenomics.bsky.social · 27/05/2025

‪@ahmig.es‬ presented the poster "Expanding the scope of evolution reporting and analysis: from intra patient dynamics to outbreaks" at MCEB 2025 in Granada thanks to the funding @bcbhubcsic.bsky.social and ‪@ageinves.bsky.social‬.

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PathoGenOmics Lab @pathogenomics.bsky.social · 04/04/2025

🔬 Beca JAE Intro en Bioinformática Desarrolla HaploScope, una pipeline híbrida (Illumina + Nanopore/PacBio) para reconstrucción de haplotipos bacterianos y virales en @i2sysbio.bsky.social Código: JAEINT25_EX_1603 🗓️ Solicita hasta 2 mayo 🔗 rb.gy/c6c8p2 #Bioinformática #Nextflow #JAEIntro #CSIC #TFM

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PathoGenOmics Lab @pathogenomics.bsky.social · 25/03/2025

HubBCB-01 @CSIC.es. Impacto del microbioma respiratorio humano en la introducción de un nuevo patógeno. IP Mireia Coscolla (I2SYSBIO, Valencia) Cinco meses, cinco mensualidades de 600€, 20 horas/semana. Nota media de grado al menos 7. Si grado terminado, matriculado master bioinformática o similar.

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PathoGenOmics Lab @pathogenomics.bsky.social · 24/03/2025

🧬 Estudiamos la genética tras la compatibilidad patógeno-hospedador en tuberculosis (laboratorios BSL2/BSL3). Dale play al vídeo: ¡que lo contagioso sea la ciencia! #EndTB #DíaMundialTuberculosis, Desde @csic.es, @ptisg.bsky.social, @i2sysbio.bsky.social y @paururo.bsky.social

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PathoGenOmics Lab @pathogenomics.bsky.social · 24/03/2025

🦠 ¿Amigos o enemigos? La infección por tuberculosis depende de la compatibilidad patógeno-hospedador. Si encajan bien, la bacteria prospera; si no, fracasa. ¡Cuestión de genética! #EndTB #DíaMundialTuberculosis

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PathoGenOmics Lab @pathogenomics.bsky.social · 24/03/2025

🦠 Friends or foes? Tuberculosis infection depends on host-pathogen compatibility. If they're genetically compatible, bacteria thrive; if not, they fail. It’s all about matching genes! #EndTB #WorldTBDay

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PathoGenOmics Lab @pathogenomics.bsky.social · 24/03/2025

🔬 On World TB Day, we show you how we study tuberculosis genomes safely in BSL2/BSL3 labs to understand and stop its spread. Hit play—spread science, not TB! #EndTB #WorldTBDay @i2sysbio.bsky.social & @paururo.bsky.social,

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PathoGenOmics Lab @pathogenomics.bsky.social · 22/11/2024

Check out our tools for genomic analisis at github.com/PathoGenOmic... • get_MNV: Reclassifies SNVs as MNVs and predicts amino acid changes. • snpick: SNP extraction for large alignments. • VIPERA: Workflow for SARS-CoV-2 evolution. • mycolorsTB: R color palette for M. tuberculosis.

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