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Vladas Oleinikovas

@oleinikovasv.bsky.social
58 followers 65 following 7 posts

Computational Chemist - CADD/TPD; PhD Chemistry at UCL; BA, MSci Natural Sciences, Chemistry (Cantab).

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Reposted by Vladas Oleinikovas
John Chodera @jchodera.bsky.social · 25/03/2025
This is the moment we've worked toward for a long time: First public disclosure of the @asapdiscovery.bsky.social pan-coronavirus antiviral aiming to help keep humanity safe from future pandemic threats like MERS-CoV and other bat coronaviruses.
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Reposted by Vladas Oleinikovas
Frank Noe @franknoe.bsky.social · 17/02/2025
Check out this great BioEmu talk by @jjimenezluna.bsky.social and @yuxie.bsky.social in the VantAI lecture series. Thank you for hosting @mmbronstein.bsky.social @lucanaef.bsky.social www.youtube.com/watch?v=8vsT...
youtube.com
Emulation of protein equilibrium ensembles with generative deep learning | José Jiménez Luna, Yu Xie
YouTube video by VantAI
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Reposted by Vladas Oleinikovas
Jerome Eberhardt @jeeberhardt.bsky.social · 08/02/2025
Basically, novelty is not defined by time in the PDB.
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Reposted by Vladas Oleinikovas
Janani Durairaj (Jay) @ninjani.bsky.social · 08/02/2025
We’ve been benchmarking deep learning co-folding methods for protein-ligand complex prediction, leading to the creation of 🌹Runs N’ Poses🌹. Great effort by @peterskrinjar.bsky.social and @jeeberhardt.bsky.social putting this together so quickly. Please have a look, excited for community feedback!
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Reposted by Vladas Oleinikovas
Gabriele Corso @gcorso.bsky.social · 24/12/2024
This is the kind of benchmarking work the field needs!
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Vladas Oleinikovas @oleinikovasv.bsky.social · 24/12/2024
End of year notes from #PLINDER team! It's been an incredible year for datasets and benchmarks for the #ML / #CompChem / #CompBio community. Superbly grateful for the positive responses, constructive feedback and contributions! It's just the start, lots more in 2️⃣0️⃣2️⃣5️⃣ 🎉 www.plinder.sh/blog/updates
plinder.sh
Updates
Updates
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Vladas Oleinikovas @oleinikovasv.bsky.social · 12/12/2024
@asapdiscovery.bsky.social is accumulating a great resource for learning real world drug discovery, not obscured by corporate filters. Lots of good science and strategy decision making examples. 👏 This comes as a bonus, in addition to progressing pandemic preparedness data packs and molecules! 💊
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Reposted by Vladas Oleinikovas
Julia Bauman @juliabauman.bsky.social · 20/11/2024
Good news: You can post video on Bluesky now! Bad news: Only up to 60s. So here’s a clipped version of my latest video about a paper exploring the landscape of possible molecular glue degradation targets:
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Vladas Oleinikovas @oleinikovasv.bsky.social · 03/12/2024
📢 Join us this Friday for a talk by @jeremywohlwend.bsky.social & @gcorso.bsky.social on their recent publication of #Boltz-1 - a new #opensource SOTA model for 3D biomolecular structure prediction. 🕰️: Fri, Dec 06 - 4p CET/10a ET 🔗: genaiindrugdiscovery.com
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