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Nextflow

@nextflow.io
984 followers 22 following 911 posts

The leading open source orchestrator for containerized, data-intensive pipelines on any infrastructure at any scale. From @seqera.io

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Nextflow @nextflow.io · 11h
Simon Jeanneau (@usherbrooke.bsky.social) → HTTM: bringing genome-wide digenic interaction screens to @nf-co.re summit.nextflow.io/2026/virtual...
summit.nextflow.io
HTTM: bringing genome-wide digenic interaction screens to nf-core – Simon Jeanneau | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 11h
Koffi Anderson Hongo (Université Nangui Abrogoua) → PlastizymeFinder: a pipeline for predicting plastic-degrading enzymes summit.nextflow.io/2026/virtual...
summit.nextflow.io
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Nextflow @nextflow.io · 11h
Daniel Sabogal-Rodríguez (Loka) → Scaling microbial population genetics on AWS with the PopMAG Nextflow pipeline summit.nextflow.io/2026/virtual...
summit.nextflow.io
Scaling microbial population genetics on AWS with the PopMAG Nextflow pipeline – Daniel Sabogal-Rodriguez | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 11h
Olga Brovkina (Institute of Clinical Molecular Biology, IKMB) → Extending @nf-co.re with nf-core/bacmodel and nf-core/dartseq workflows summit.nextflow.io/2026/virtual...
summit.nextflow.io
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Nextflow @nextflow.io · 11h
William Gardner (@uwmadison.bsky.social ) → Needles in the metagenome: environmental pathogen detection with Nextflow summit.nextflow.io/2026/virtual...
summit.nextflow.io
Needles in the metagenome: environmental pathogen detection with Nextflow – William Gardner | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 11h
Fernando Falat (@uspoficial.bsky.social) → IS Sentinel: detecting novel insertion sequence elements in bacterial genomes summit.nextflow.io/2026/virtual...
summit.nextflow.io
IS Sentinel: detecting novel insertion sequence elements in bacterial genomes – Fernando Falat | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 11h
🔹 Dhvnit Mehta (Gujarat Technological University) → ONT Long-Read NGS detects SARS-CoV-2 Variants via Wastewater-based epidemiology summit.nextflow.io/2026/virtual...
summit.nextflow.io
ONT Long-Read NGS detects SARS-CoV-2 Variants via Wastewater-based epidemiology – Dhvnit Mehta | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 11h
Less than 2 weeks to go until the Global #NextflowSummit by @seqera.io🌎 Register now to join us online: hubs.ly/Q04yMhy40 🎤 Meet the speakers in the Pipelines for Microbiology track.
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nf-core @nf-co.re · 20h
15 days to go until the Hackathon in Barcelona.⏳ Join us: hubs.la/Q04yHBpQ0 💡Choose from 1 of 14 hackathon projects or submit your own project idea! Today's project spotlight 🧵
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Nextflow @nextflow.io · 29/09/2026
🎙️ New Nextflow Podcast Episode: Writing Nextflow Plugins in 2026! This one is all about Nextflow Plugins. @ewels.bsky.social is joined by Jon Manning, Rike Hanssen, and Ben Sherman to discuss the world of extending core Nextflow functionality. 👀 Watch now: seqera.io/podcasts/epi...
seqera.io
Writing Nextflow plugins in 2026 | The Nextflow Podcast by Seqera
Phil Ewels, Ben Sherman, Jon Manning and Rike Hanssen revisit Nextflow plugins. They cover the new plugin tooling, the Nextflow plugin registry, a live demo of the nf-emoji plugin, custom config scope...
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Nextflow @nextflow.io · 28/09/2026
🔍 See the full agenda: hubs.la/Q04ypVTn0
hubs.la
Agenda | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 28/09/2026
Albert Palleja Caro (Novo Nordisk Foundation) → Multiomics Data Infrastructure for Reproducible and Scalable Biofoundry Research summit.nextflow.io/2026/virtual...
summit.nextflow.io
Multiomics Data Infrastructure for Reproducible and Scalable Biofoundry Research – Albert Palleja Caro | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 28/09/2026
@maxulysse.github.io ( @scilifelab-ngi.bsky.social) → Building a Unified Genomics Pipeline Ecosystem at Core Facilities summit.nextflow.io/2026/virtual...
summit.nextflow.io
Building a Unified Genomics Pipeline Ecosystem at Core Facilities – Maxime Garcia | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 28/09/2026
Carlos Ruiz Arenas (CIMA - Universidad de Navarra) → A community-driven bioinformatics infrastructure for standardized rare disease diagnostics summit.nextflow.io/2026/virtual...
summit.nextflow.io
CBRA: A community-driven bioinformatics infrastructure for standardized rare disease diagnostics – Carlos Ruiz Arenas | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 28/09/2026
Sahil Patel (Benchling) & Rob Newman, PhD (@seqera.io) → Bridging the Wet-Lab and Dry-Lab with Benchling and Seqera summit.nextflow.io/2026/virtual...
summit.nextflow.io
Bridging the Wet-Lab and Dry-Lab with Benchling and Seqera – Sahil Patel, Rob Newman | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 28/09/2026
Barbara Novak (@nasaupdates.bsky.social GeneLab) → NASA GeneLab Workflows: Using Nextflow to Enable Processing Across Platforms summit.nextflow.io/2026/virtual...
summit.nextflow.io
NASA GeneLab Workflows: Using Nextflow to Enable Processing Across Platforms – Barbara Novak | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 28/09/2026
2 weeks to go until the Global #NextflowSummit by @seqera.io!🌎 It's online and free to attend, join us: hubs.la/Q04ypV9D0 🎤 Meet the speakers in the Platforms & Infrastructure track 🧵
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Nextflow @nextflow.io · 25/09/2026
Daniel Garbozo (@nyu.edu) → Ancestry Enrichment of IEI Variants in Brazil via @nf-co.re /Sarek summit.nextflow.io/2026/virtual...
summit.nextflow.io
Ancestry Enrichment of IEI Variants in Brazil via nf-core/Sarek – Daniel Garbozo | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 25/09/2026
Abdoallah Sharaf (SequAna, @uni-konstanz.de) → GeneForge v2.1 A Comprehensive Nextflow Pipeline for Eukaryotic Genome Annotation summit.nextflow.io/2026/virtual...
summit.nextflow.io
GeneForge v2.1 A Comprehensive Nextflow Pipeline for Eukaryotic Genome Annotation – Abdoallah Sharaf | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 25/09/2026
Mark Liddell (@unileveruki.bsky.social) → Productionising Bayesian Concentration-Response Modelling with Nextflow summit.nextflow.io/2026/virtual...
summit.nextflow.io
Productionising Bayesian Concentration-Response Modelling with Nextflow – Mark Liddell | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 25/09/2026
Erin Weisbart (@broadinstitute.org) → End-to-end Nextflow pipeline for pooled Cell Painting analysis summit.nextflow.io/2026/virtual...
summit.nextflow.io
End-to-end Nextflow pipeline for pooled Cell Painting analysis – Erin Weisbart | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 25/09/2026
Diego Marques Coelho (Federal University of Rio Grande do Norte) → NetPerturb: scalable in-silico perturbation scoring from scRNA-seq networks summit.nextflow.io/2026/virtual...
summit.nextflow.io
NetPerturb: scalable in-silico perturbation scoring from scRNA-seq networks – Diego Marques Coelho | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 25/09/2026
Аbdullah Аlotaibi (STaiMIC) → Evidence-Aware Cross-Species Benchmarking with Nextflow summit.nextflow.io/2026/virtual...
summit.nextflow.io
Evidence-Aware Cross-Species Benchmarking with Nextflow – Abdullah Alotaibi | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 25/09/2026
18 days to go!⏳Join the community online for the #NextflowSummit by @seqera.io on Oct 13-14.🌎 hubs.ly/Q04ykDlL0 🎤Meet the speakers in the General Methods track.🧵
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Nextflow @nextflow.io · 25/09/2026
In two days you'll learn to: ✅ Build multi-step workflows ✅ Run workflows from the command line ✅ Undertand workflow logic and language basics ✅ Get started with @nf-co.re resources hubs.la/Q04yjdvC0
hubs.la
Training | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 25/09/2026
📢 Deadline extended: Nextflow Training in Barcelona on Oct 15-16. The Advanced track is sold out, but Beginner spaces are still available. #NextflowSummit @seqera.io 🎟️ Register now to join: hubs.la/Q04yjdvC0
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Nextflow @nextflow.io · 23/09/2026
Michael Geaghan (@sydney.edu.au) → Config builder: an @nf-co.re tool to guide config file creation summit.nextflow.io/2026/virtual...
summit.nextflow.io
Config builder: an nf-core tool to guide config file creation – Michael Geaghan | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 23/09/2026
Thomas Weber (@embl.org) → Depictio: building interactive dashboards from Nextflow workflow outputs summit.nextflow.io/2026/virtual...
summit.nextflow.io
Depictio: building interactive dashboards from nextflow workflow outputs – Thomas Weber | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 23/09/2026
@alexpeltzer.bsky.social (@boehringerglobal.bsky.social) → Bringing @nf-co.re to regulated environments with ClinBias Cloud summit.nextflow.io/2026/virtual...
summit.nextflow.io
Bringing nf-core to regulated environments with ClinBias Cloud – Alexander Peltzer | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 23/09/2026
Ekaterina Sakharova (@ebi.embl.org) → @nf-co.re/seqsubmit: pipeline for automated data submission to INSDC resources summit.nextflow.io/2026/virtual...
summit.nextflow.io
nf-core/seqsubmit: pipeline for automated data submission to INSDC resources – Ekaterina Sakharova | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 23/09/2026
Julian Flesch (@unituebingen.bsky.social) → Faster, Higher, Stricter: What's new with @nf-co.re infrastructure summit.nextflow.io/2026/virtual...
summit.nextflow.io
Faster, Higher, Stricter: What's new with nf-core infrastructure – Julian Flesch | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 23/09/2026
Join us on Oct 13-14 for the Global #NextflowSummit by @seqera.io💻 Online and free to attend: hubs.la/Q04y7n260 🎤 Meet the speakers in the Tooling and Ecosystem track. 🧵
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nf-core @nf-co.re · 23/09/2026
The Barcelona nf-core Hackathon is happening in 3 weeks!⏳ Choose from 13 projects to work on, or bring your own project idea. Today's project spotlight 👇 ⚒️ Project → Benchmarking (Special Interest Group) 🧑‍💻 Project Lead → Kübra Narci, @ghga.bsky.social 🔗 Project Link → nf-co.re/hackathon-pr...
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Nextflow @nextflow.io · 23/09/2026
🔹 nf-core Hackathon → Collaborate on projects including agentic module development, pipeline improvements, and benchmarking: summit.nextflow.io/2026/barcelo...
summit.nextflow.io
Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 23/09/2026
🔹 Nextflow Training → Beginner and Advanced tracks, from building your first pipelines to scaling for production: summit.nextflow.io/2026/barcelo...
summit.nextflow.io
Training | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 23/09/2026
⏰ Last call: Registration for Nextflow Training or the @nf-co.re Hackathon in Barcelona closes tomorrow. 🌆 Plus, connect with the Nextflow creators (@seqera.io) at the Rooftop Social!🌆 Spots are limited. Register by end of day tomorrow: hubs.la/Q04y5Wz70
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Reposted by Nextflow
nf-core @nf-co.re · 22/09/2026
23 days to go until the Hackathon in Barcelona ⬇️ Check our today's project spotlight. ⚒️ Project → nf-core/mag improvements 🧑‍💻 Project Lead → Jonathan Rondeau-Leclaire, Université de Sherbrooke 🔗 Project Link → nf-co.re/hackathon-pr...
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Nextflow @nextflow.io · 21/09/2026
Rayan Hassaïne (Hartwig Medical Foundation) → oncoanalyser 3.0: Platform-agnostic cancer genomics, Nextflow's strict syntax summit.nextflow.io/2026/virtual...
summit.nextflow.io
oncoanalyser 3.0: Platform-Agnostic Cancer Genomics, Nextflow's Strict Syntax – Rayan Hassaine | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 21/09/2026
Nathalia Graf Grachet (Roche) → An ultra-low input, ultra-sensitive tumor-informed WGS-based minimal residual disease assay for solid tumors summit.nextflow.io/2026/virtual...
summit.nextflow.io
An ultra-low input, ultra-sensitive tumor-informed whole-genome sequencing-based minimal residual disease assay for solid tumors – Nathalia Graf Grachet | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 21/09/2026
Saba Nafees (Myriad Genetics)→ From production Nextflow to cross-pipeline MRD variant calling via @nf-co.re /sarek summit.nextflow.io/2026/virtual...
summit.nextflow.io
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Nextflow @nextflow.io · 21/09/2026
Ferriol Calvet (@irbbarcelona.org)→ Using DeepClone to study somatic mutagenesis and selection at high resolution. summit.nextflow.io/2026/virtual...
summit.nextflow.io
Using DeepClone to study somatic mutagenesis and selection at high resolution – Ferriol Calvet | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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Nextflow @nextflow.io · 21/09/2026
The countdown to #NextflowSummit by @seqera.io has begun! 🎤 Meet the speakers in the Pipelines for Oncology track.🧵 🔍 Agenda: hubs.la/Q04xY1Nt0 🎟️ Registration: hubs.la/Q04xY1TL0
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Nextflow @nextflow.io · 15/09/2026
Just 1 month to go until Nextflow Training and @nf-co.re Hackathon in Barcelona!🧦 Here's a sneak peak at exclusive swag you'll receive: stickers, t'shirts, socks and more! Register by Sep 24 to join the fun: hubs.la/Q04xwzJB0 #NextflowSummit
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Nextflow @nextflow.io · 15/09/2026
Developing Nextflow? Join us in Barcelona, Oct 15-16! This is a non-competitive hackathon where developers come together to build, improve, and share Nextflow pipelines with the @nf-co.re community. All skill levels welcome: hubs.la/Q04xwdj90
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Nextflow @nextflow.io · 14/09/2026
Nextflow Training Week by @seqera.io has officially begun!🚀 Choose your track: beginner or advanced training.🎓The opening session starts in just over 4 hours. Register now to get involved: hubs.la/Q04xlv3j0
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Nextflow @nextflow.io · 11/09/2026
Nextflow Training Week by @seqera.io is back next week!👩‍💻 Join 500+ members of the global community learning Nextflow: Beginners and Advanced tracks available. Free to join, register now: hubs.la/Q04xfyPV0
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Nextflow @nextflow.io · 08/09/2026
Just 2 weeks left to register for the @nf-co.re Hackathon in Barcelona!👩‍💻 Join fellow Nextflow developers to collaborate on projects, or bring your own project idea to the table. 🔍 Discover projects: hubs.la/Q04wTVZy0 🎟️ Register by Sep 24: hubs.la/Q04wTW1v0
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Seqera @seqera.io · 07/09/2026
Join 400+ others at @nextflow.io Training Week on Sep 14-18!🗓️ Start anytime during the week, learn at your own pace, and get live support from the global Nextflow community, plus the chance to earn an official training certificate. 🎟️ Online abd free to attend: hubs.la/Q04wR-3Q0
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Nextflow @nextflow.io · 07/09/2026
🌎Whether you're joining the online #NextflowSummit or heading to Barcelona for the @nf-co.re Hackathon or Nextflow Training, let us know you're attending!👾 Register now to create your pixel avatar: hubs.la/Q04wQpTZ0
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Nextflow @nextflow.io · 03/09/2026
🔗 Meet the speakers: hubs.la/Q04wBLXx0 🎟️ Register to attend: hubs.la/Q04wBM0C0
hubs.la
Speakers | Nextflow Summit 2026
Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
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