iiinova — where your digital self keeps evolving

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Aperture Neuro @apertureohbm.bsky.social · 11/09/2026

🧠 New in Aperture Neuro: The open-source NiiVue wrapper ecosystem brings interactive neuroimaging visualization directly into VS Code, JupyterLab, Python, Julia, R, desktop apps, and the web—supporting more seamless and reproducible workflows. doi.org/10.52294/001...

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Aperture Neuro @apertureohbm.bsky.social · 22/05/2026

Dorig et al. showcase NeurodeskEDU, an emerging learning resource built on Neurodesk that enables fully reproducible neuroimaging workflows through interactive Jupyter Notebooks: doi.org/10.52294/001... @neurodesk.org @sbollmann.bsky.social #FutureofPublishing #SpecialIssue

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Aperture Neuro @apertureohbm.bsky.social · 19/09/2025

Masson-Trottier et al. demonstrate how Neurodesk improves the transparency, portability, and sustainability of neuroimaging workflows: doi.org/10.52294/001... @neurodesk.org @sbollmann.bsky.social #FutureofPublishing #SpecialIssue

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neurodesk.org @neurodesk.org · 24/06/2025

Fernanda Ribeiro kicking off OHBM in the educational session “Maximizing scientific efficiency through sustainability, reproducibility, and FAIRness” and showing how Neurodesk can help :)

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OHBM Open Science Special Interest Group @ohbmossig.bsky.social · 23/06/2025

Day 3 of OHBM BrainHack going strong (this photo is from yesterday btw, repeat today anyone?) with HackTrack, TrainTrack, StatsWorkshop, and @neurodesk.org !

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Fernanda Ribeiro @felenitaribeiro.bsky.social · 21/06/2025

@neurodesk.org workshop at BrainHack #OHBM2025 is about to start 🙌🏽

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OHBM Open Science Special Interest Group @ohbmossig.bsky.social · 10/06/2025

🧠 Join us at Brainhack 2025 in Brisbane! We’re running a Neurodesk workshop on reproducible, portable neuroimaging workflows. 📅 21 June 🌐 Learn, hack, and contribute! 💻🌏 🔗 ohbm.github.io/hackathon202... #Neurodesk #Brainhack2025 #Neuroimaging #OpenScience

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Bruno Hebling Vieira @bhvieira.github.io · 11/06/2025

One of the exciting news for this year OHBM BrainHack is that we are bringing together like-minded events and joining up forces! @neurodesk.org will be there on June 21 for the Workshop, as well as the the 22nd with 23rd with two Hacking projects!

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OHBM Open Science Special Interest Group @ohbmossig.bsky.social · 12/06/2025

🔁 Neurodesk helps you re-run old analyses — even years later — in exactly the same environment. This is the power of portable reproducibility. Try it out at our Brainhack workshop. #Neuroimaging #Reproducibility #Brainhack2025 @neurodesk.org

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OHBM Open Science Special Interest Group @ohbmossig.bsky.social · 12/06/2025

“What if installing FSL or FreeSurfer didn’t take hours — or even minutes?” Come find out how we’ve made neuroimaging tools portable, fast, and accessible for everyone at the Neurodesk workshop at Brainhack 2025. #Neurodesk #Brainhack #OHBM2025 @neurodesk.org

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OHBM Australia @ohbm-australia.bsky.social · 02/06/2025

🚨 BrainHack is BACK for #OHBM2025 🧠✨ In addition to the Hackathon, this year will feature two brand new workshops: how to use NeuroDesk; and how to use the latest neuroimaging statistics 📍The Precinct, Brisbane 📅June 21–23, 2025 Details in the link, sign up today! ohbm.github.io/hackathon2025/

ohbm.github.io

OHBM Hackathon 2025

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Australian Research Data Commons (ARDC) @ardc.edu.au · 06/05/2025

Ready to take your #health and #medical #research to the next level? 🩺 Our suite of resources and tools includes: 💡 Training and educational materials 📊 Datasets 🔧 Tools: like @neurodesk.org & ARDC Nectar Research Cloud. Explore the resources🔗 bit.ly/ardc-people-... #TipTuesday

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neurodesk.org @neurodesk.org · 01/05/2025

Neurodesk now integrates with Siemens OpenRecon :) Bring your image processing pipeline to the MRI scanner and accelerate clinical translation. This will be presented at ISMRM 2025 on Monday, 12th of May, 10am at the Siemens Booth, 4pm at poster 1962 and at the MAGNETOM User Meeting.

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Bruno Hebling Vieira @bhvieira.github.io · 22/03/2025

OHBM Brainhack 2025 – Register today! Exactly three months from now, we at OSSIG will bring you the OHBM Brainhack, and this time we will be joined by the @neurodesk.bsky.social and the Neuroimaging Statistics Workshops ! 🙂🧠 @ohbmofficial.bsky.social

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Andrew Zalesky @andrewzalesky.bsky.social · 03/02/2025

Check out the schedule of events linked with OHBM 2025 - Brain connectivity workshop, June 20-22 - Hackathon, June 21-23 - Neurodesk, June 21 - Brain gradients, June 23 - Precision network therapeutics, June 29 Register now! We look forward to welcoming you to Brisbane! @ohbmofficial.bsky.social

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neurodesk.org @neurodesk.org · 24/01/2025

The MRItogether 2024 videos are online :) 1. Neurodesk's development journey and lessons learned: www.youtube.com/watch?v=KJh_... 2. Neurodesk overview and live demo: www.youtube.com/watch?v=B7Gm... 3. how data can be converted into BIDS using Neurodesk: www.youtube.com/watch?v=uXrg...

youtube.com

MRITogether2024-S3T3: Development journey of the Neurodesk platform

YouTube video by ESMRMB

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neurodesk.org @neurodesk.org · 11/12/2024

We have a fully funded PhD position available, application deadline is 8th Jan 2025: study.uq.edu.au/study-option... This project will develop methodologies and standards for defining reproducible, benchmarked analysis pipelines and integrating them in Neurodesk.org and Brainlife.io

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neurodesk.org @neurodesk.org · 02/12/2024

The latest episode of Andy Jahn's BrainCast covers how www.Neurodesk.org was developed, how it is currently used, and what its prospects are for making neuroimaging data analysis more accessible and reproducible. YouTube: www.youtube.com/watch?v=U_6_... Spotify: open.spotify.com/episode/57vT...

neurodesk.org

Neurodesk

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neurodesk.org @neurodesk.org · 02/12/2024

MRI together is on this week - December 3-6 2024 - A Global workshop on open, reproducible, and inclusive MR research! Registration: www.eventbrite.co.uk/e/mri-togeth... There will be 3 talks about Neurodesk on Wednesday and Thursday by Aswin Narayanan, @sbollmann.bsky.social and Thuy Dao

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Francesco Santini - ESMRMB2025 Program Chair @mrifranz.bsky.social · 19/11/2024

Let's create an #MRI researcher starter pack! There are a couple that are neuroimaging-based, but not really the method development community. I started putting together a few profiles, but please spread the word and tell me who else to add. If there is already one, let me know! go.bsky.app/EVqd6pe

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Russ Poldrack @russpoldrack.org · 25/11/2024

Are you tempted to orthogonalize the regressors in your fMRI model? @jeanette-mumford.bsky.social tells you why this is almost never a good idea, and is likely to wreck the interpretation of your model. mumfordbrainstats.tumblr.com/post/1337933...

mumfordbrainstats.tumblr.com

Collinearity...is orthogonalization the answer? (No)

If I had a dollar for every time I read a paper purporting to have repaired a multicollinearity issue by orthogonalizing regressors... Unfortunately, once collinearity is there and the data have been...

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Sylvain Baillet @sylvainbaillet.bsky.social · 02/12/2024

Time to follow @ohbmofficial.bsky.social on BlueSky, you brain mappers. 🧠 bsky.app/profile/ohbm...

bsky.app

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Steffen and Saskia Bollmann @sbollmann.bsky.social · 27/11/2024

Very lucky to hear that our 3-year ARC Discovery Project "Towards Standards and Benchmarks for Reproducible Neuroimaging Research" was funded :) Planned outcomes include implementing and integrating processing standards with neuroimaging platforms like Neurodesk.org and Brainlife.io

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Fernanda Ribeiro @felenitaribeiro.bsky.social · 27/11/2024

#MRITogether is around the corner, and here is more about our first 2 sessions 😍 Come join us and register here: mritogether.esmrmb.org/24m/registra...

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Fernanda Ribeiro @felenitaribeiro.bsky.social · 28/11/2024

#MRITogether Day 2 (2/2) program is also full of excellent speakers, including my new supervisor @martinhebart.bsky.social 😆 Please join us in this free, fantastic event! Even if it is just to attend a session, make sure you register to access our webinar: mritogether.esmrmb.org/24m/registra...

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INCF @incforg.bsky.social · 19/11/2024

We created a #neuroinformagical (obvs) starter pack! Let us know who else to add! #openscience #datasharing #neuroskyence 🧪 go.bsky.app/LRqnaMP

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Fernanda Ribeiro @felenitaribeiro.bsky.social · 28/11/2024

#MRITogether Day 2 (1/2) program is now out! There are so many amazing talks, but I'm especially looking forward to hearing more about transferable skills and career transitions from these amazing speakers! Register here: mritogether.esmrmb.org/24m/registra...

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Armin Toghi @armintoghi.bsky.social · 23/11/2024

Just start doing some real tasks with Neurodesk @neurodesk.bsky.social . It's really amazing (at least far better than having dual boot if you are using Windows). Check out if you are working with neuroimaging packages. www.neurodesk.org

neurodesk.org

Neurodesk

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OHBM Sustainability & Environmental Action SIG (SEA-SIG) @ohbmenvironment.bsky.social · 22/11/2024

✨We are thrilled to announce the upcoming launch of a brand-new OHBM online satellite meeting, co-organized by the Sustainability and Environment Action Special Interest Group (SEA-SIG) and OHBM.✨ Mark your calendars: September 2025! 🌱🌍

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Florian Naudet @floriannaudet.bsky.social · 22/11/2024

Updated -largely no exhaustive- list : go.bsky.app/R8RNJgc Please reply to be added.

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PennLINC @pennlinc.bsky.social · 22/11/2024

We're excited to release new versions of our BIDS-Apps for processing and analyzing #dmri data, QSIPrep and QSIRecon! Our team has been working hard to prepare these pipelines to process infant data and bring them in line with the @nipreps.bsky.social ecosystem. #neuroimaging #nipreps #bids 1/10

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Lars Kasper @mrikasper.bsky.social · 21/11/2024

My first post on bluesky and quite on brand - moving here to experience the open science and serendipitous virtual water cooler discussions good ol' twitter used to have. If you want this in distilled form, join us for #MRITogether24 Dec 3-6th online, open and free: mritogether.esmrmb.org/24m/

mritogether.esmrmb.org

MRI Together

Global workshop on open, reproducible, and inclusive MR research

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Francesco Santini - ESMRMB2025 Program Chair @mrifranz.bsky.social · 20/11/2024

77 people in the starter pack! What a network! And #protip: if you add #MRI or #MRS to your post, they will automatically show up in the MRISky feed, which is also included in the pack! go.bsky.app/EVqd6pe

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Tim Behrens @behrenstimb.bsky.social · 20/11/2024

Early days, but it looks like our authors don't think we need an impact factor either! Submissions are strong in numbers and high quality since the Clarivate/WoS announcement. We should not let a multibillion dollar company dictate how science is evaluated!

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Francesco Santini - ESMRMB2025 Program Chair @mrifranz.bsky.social · 20/11/2024

Thanks to a nice crowd effort, the starter pack is now much larger! So great to see a fantastic network of #MRI researchers! Share and suggest people to add here below! go.bsky.app/EVqd6pe

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Magnetic Resonance News @nmr900.bsky.social · 12/11/2024

RT @ESMRMB 🚨 MRI TOGETHER IS BACK 🚨 🗳 REGISTRATION NOW OPEN 🗳 MRI Together 2024 eventbrite.co.uk/e/mri-togeth... Join us from 3-6 December! An event on open, reproducible and inclusive MR research. Online and across different time-zones 🌍 mritogether.esmrmb.org #mritogether2024 #NMRchat #NMR #MRI 🧲

eventbrite.co.uk

MRI Together 2024

MRI Together is a global online event on open, reproducible, and inclusive MRI research.

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Aperture Neuro @apertureohbm.bsky.social · 05/09/2024

Plis et al. describe #brainchop, a web application that allows users to implement deep learning models to local neuroimaging data from within their browser doi.org/10.52294/001... @fmri-today.bsky.social

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Aperture Neuro @apertureohbm.bsky.social · 12/09/2024

Xu and Ribeiro et al. introduce VesselBoost, a toolbox that segments small vessels in magnetic resonance angiography data doi.org/10.52294/001... @fmri-today.bsky.social

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Aperture Neuro @apertureohbm.bsky.social · 13/11/2024

📢 Calling for submissions to the Special Issue on Open Datasets! 📢 Share your work on open data across key topics, such as: ⚖️ Ethical & legal considerations 🔧 Standards & tools 🌍 Geographical trends 💰 Funding 🌱 Data sustainability & more!

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neurodesk.org @neurodesk.org · 09/09/2024

We are looking for a www.neurodesk.org Postdoctoral Research Fellow. If you are interested in reproducible Neuroimaging and software containers, please reach out and share :) More information: wd3.myworkday.com/uq/d/inst/15...

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neurodesk.org @neurodesk.org · 24/04/2024

We are organising a Neurodesk.org workshop in Zurich (Switzerland) on the 3rd of June 2024 and there are a few spots left. The course includes catering and is 130 CHF. The registration link is here: docs.google.com/forms/d/e/1F...

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neurodesk.org @neurodesk.org · 16/04/2024

This news article reviews the advancements that our www.neurodesk.org and brainlife.io platforms are facilitating within the field and discusses how this could be a game-changer for all neuroscientists, but particularly for those working in smaller, non-research-intensive academic institutions.

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neurodesk.org @neurodesk.org · 02/04/2024

New neurodesk.org app release v1.5.0 :) The Neurodeskapp (www.neurodesk.org/docs/getting...) now has support for Podman in addition to Docker.

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neurodesk.org @neurodesk.org · 04/02/2024

Neurodesk is now on bsky :) Follow us here to get updates and news. If you haven't heard about Neurodesk yet, have a look at our recently published Nature Methods paper introducing the project rdcu.be/dvqwU and our website, www.neurodesk.org

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