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napari

@napari.fosstodon.org.ap.brid.gy
554 followers 0 following 72 posts

I am an n-dimensional image viewer for Python 🌉 bridged from ⁂ fosstodon.org/@napari, follow @ap.brid.gy to interact

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napari @napari.fosstodon.org.ap.brid.gy · 26/09/2026
🚀 napari is hiring Remote Developers-in-Residence! Join us to build the future of interactive n-dimensional data visualization in Python. 💻 60% Dev / 20% Maintenance / 20% Community & Outreach 💰 $59.50/hr (Contract, 14–35 hrs/wk) 🌍 100% Remote, open globally Learn more and apply today […]
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napari @napari.fosstodon.org.ap.brid.gy · 13/08/2026
Sizzling Summer Series 3 - naPLari Hackathon, Kraków 🇵🇱 A lucky crew of 13 got to spend 6 jam-packed sunny days inside pumping out a fantastical assortment of napari features 🖥️ It was a ☕️ caffeine-, string 🧀 cheese- and 🥟 pierogi-fuelled extravaganza 🎊
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napari @napari.fosstodon.org.ap.brid.gy · 12/08/2026
Sizzling Summer Series 2: Minneapolis -> Kraków ✈️ We talked, tutorialed and sprinted at EuroPython! The sprints WENT OFF -- 22 merged PRs don't lie 🤯 Then rinse repeat for EuroSciPy - our first conference as platinum sponsors! 💐THANK YOU💐 to those who joined us in Kraków!
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napari @napari.fosstodon.org.ap.brid.gy · 12/08/2026
The past month has been a whirlwind for napari 🌪️ Join us for a Sizzling Summer Series of posts highlighting the napari community's amazing work💪 First, Tim Monko, @aganders3 and @willingc took on Minneapolis for SciPy 2026 with a tutorial, talk and tools […] [Original post on fosstodon.org]
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napari @napari.fosstodon.org.ap.brid.gy · 31/07/2026
RE: fosstodon.org/@napari/1166165047810… And it's a wrap! The hackathon was a fantastic success! 🥳 You can look forward to a longer post about all we did, and one of our biggest releases yet in 0.9.0! Huge thanks to all the participants 🤩, and we hope to see you at the next one!
Hackathon participants discussing a new feature demo.Jules Vanaret shows off slicing of volumes with non-orthogonal transforms.The naPLari hackathon crowd: Wouter-Michiel Vierdag, Grzegorz Bokota, Tim Monko, Giannis Liaskas, Draga Doncila Pop, Lorenzo Gaifas, Aroj Hada, Brian Northan, Jules Vanaret, Zuzana Čočková, Curtis Rueden, Juan Nunez-Iglesias, and Margot Chazotte.Celebratory drink after the last full day of the hackathon. 🍻
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napari @napari.fosstodon.org.ap.brid.gy · 12/07/2026
Struggling for something to do in a TWO DAY gap without ⚽? How about trying our pre-release of napari 0.8.0? napari.org/dev/release/release_0_8_… Of note, this release drops Py3.10 support and deprecates PyQt5 in favor of PyQt6. It also adds some neat new features and […]
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napari @napari.fosstodon.org.ap.brid.gy · 17/06/2026
napari 0.7.1 is now available!! 🚀 🎉 Read the full release notes here: napari.org/stable/release/release_0… Highlights: the scale bar inherits units from layers, colorbars for points layers, locking layers, and a signed Windows bundle! We thank especially our 9 new brilliant […]
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napari @napari.fosstodon.org.ap.brid.gy · 12/06/2026
RE: fosstodon.org/@napari/1166165047810… Join our hackathon in Kraków! It's going to be an absolutely great time! At least 8 awesome folks will be there! Fill out the typeform below so we can be in touch. 😍
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napari @napari.fosstodon.org.ap.brid.gy · 22/05/2026
🎉 Announcing the naPLari hackathon in Kraków, Poland 🇵🇱, July 24–29 2026, after EuroSciPy! Hack on napari, join deep dives, meet the team. All experience levels welcome! 📝 Register by July 1: napari.typeform.com/naplari-hack #napari #ScientificPython #OpenSource #EuroSciPy #BioImageAnalysis
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napari @napari.fosstodon.org.ap.brid.gy · 18/03/2026
RE: fosstodon.org/@napari/1162087655422… There are still tickets available for next week's Pacific workshop! ti.to/nf-projects/intronapari-pacif… You too could be a part of the very first pilot online workshop! 🥳 Even if a workshop if full, please sign up for the waitlist! […]
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napari @napari.fosstodon.org.ap.brid.gy · 18/03/2026
RE: fosstodon.org/@napari/1162143202260… Thank you for the feedback so far! 0.7.0rc1 is now out. Barring any major issues, we'll be releasing 0.7.0 this week! You can test the rc using `python -m pip install "napari[all]>=0.7.0rc1"`
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napari @napari.fosstodon.org.ap.brid.gy · 10/03/2026
napari needs your help! Has napari helped you make cool and groundbreaking discoveries? We'd love to highlight that in our docs. Please tell us about it! You can fill in this survey: napari.typeform.com/to/vTCKeTKv and/or, as ever, drop by our chat room or meetings […]
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napari @napari.fosstodon.org.ap.brid.gy · 24/12/2025
Has napari helped your research this year? Why not say thank you to free and open source software by making a small donation? Every bit helps your friendly core team fix bugs and bring new features to life! CZI will match up to $75K in donations! […] [Original post on fosstodon.org]
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napari @napari.fosstodon.org.ap.brid.gy · 18/12/2025
We're a bit late in ringing in the giving season, but it is indeed upon us. Enjoy our special edition holiday logo ☃️ and, if you can spare a bit and appreciate napari, please donate to our development efforts! 🙏 CZI will match donations up to $75K. opencollective.com/napari/donate
the napari logo (a two-lobed island) modified to look like a snowman
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napari @napari.fosstodon.org.ap.brid.gy · 10/11/2025
Remember that survey about how we can sustain napari development? We extended the deadline until the 16th, AoE! Blog post: napari.org/island-dispatch/blog/sus… Survey: napari.typeform.com/sustainability If you use napari at all we would be super grateful if […]
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napari @napari.fosstodon.org.ap.brid.gy · 31/10/2025
Happy Halloween from the napari team!
Special Halloween edition of the napari logo. The island is white and looks like a cute ghost, and there are spider webs
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napari @napari.fosstodon.org.ap.brid.gy · 21/10/2025
You might have noticed lots of activity in the napari project recently! 🚀 We're grateful for a grant from CZI that's keeping us going, but grants don't last forever: we're trying to figure out sustainable long term funding. Read our blog post to find out how you can help […]
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napari @napari.fosstodon.org.ap.brid.gy · 16/10/2025
napari 0.6.6 is out! 🚀 This is a bugfix release following up 0.6.5: if something in your napari workflow unexplicably broke, you might want to update ;) Also, with the new bundle you can now "open files with > napari"! Check out the full release notes on the website […]
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napari @napari.fosstodon.org.ap.brid.gy · 06/10/2025
Join the new plugin sustainability initiative! 🚀 Everyone is invited to fill out this interest form: forms.gle/iwX6P4tuooHK5aKH9 Follow along with initial discussion on Zulip […]
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napari @napari.fosstodon.org.ap.brid.gy · 02/10/2025
napari 0.6.5 is out! 🚀 Rapid-fire highlights are: colorbar overlay, custom startup script, and better and prettier documentation! Check out the full release notes here: napari.org/dev/release/release_0_6_…
Image depicting the napari viewer in grid mode with scale bars and color bars enabled
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napari @napari.fosstodon.org.ap.brid.gy · 18/08/2025
🚀 napari 0.6.4 is out! Highlights from this bite-sized release: launching scripts from the command line with `napari <path-to-script>` and making the console auto-focus when opened. We’ll be announcing all future napari releases here, so stay tuned! 🔗 Release notes […]
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napari @napari.fosstodon.org.ap.brid.gy · 23/07/2025
🚀 Big news! The napari hub has been reimplemented and is now community-run! :tada: It's still the go-to place for finding and sharing napari plugins, but the website is now snappier and lighter-weight. Check it out 👉 www.napari-hub.org
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napari @napari.fosstodon.org.ap.brid.gy · 10/07/2025
🚀 The napari team is excited to announce our brand new development roadmap — a community-informed vision for the future of napari. We’re laying the foundation for long-term sustainability, better docs, smoother releases, and exciting new features. 🔍 Read our blog to learn more about our roadmap […]
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napari @napari.fosstodon.org.ap.brid.gy · 03/06/2025
Reminder: the GloBIAS 2025 symposium is happening Oct 26-31 in Kobe, Japan, and, on top of many other cool bioimage analysis events, several members of the napari core team will be leading a napari hackathon. www.globias.org/activities/bioimage…
globias.org
Bioimage Analysis Conference 2025 in Kobe
GloBIAS Bioimage Analysis Conference 2025 Oct 26, 2025 - Oct 31, 2025 | Kobe, Japan Venue: RIKEN BDR, Kobe, Japan Registration via Google Forms here: https://tinyurl.com/3dtajhh6 General information Important dates Fees Travel Grants Training School 2025 Hackathon I and Hackathon II
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napari @napari.fosstodon.org.ap.brid.gy · 28/05/2025
Ok guys **nobody open any more issues** 😂
A cropped screenshot of the napari github repo. The issues tab shows 999 open issues.
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napari @napari.fosstodon.org.ap.brid.gy · 13/05/2025
Any naparistas going to GloBIAS 2025, Oct 26-31 in Kobe, Japan? Thanks to the GloBIAS organisers 🙏, we will be hosting a napari hackathon in parallel to the FAIR workflows hackathon! More info on our Zulip […]
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napari @napari.fosstodon.org.ap.brid.gy · 06/05/2025
Wait, wait, wait....v0.6.0 is just out, but there is already a next big feature coming to napari? Yes! You see it right 😊 (more impressive demo coming soon) . Our own @brisvag has been doing work on multichannel grid mode which is to replace our current grid […] [Original post on fosstodon.org]
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napari @napari.fosstodon.org.ap.brid.gy · 01/05/2025
And it's finally here! napari 0.6.0 is out on PyPI and conda-forge! 🥳 We've had a few threads about this release already but let's recap with some highlights: 🧵
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napari @napari.fosstodon.org.ap.brid.gy · 23/04/2025
napari 0.6.0rc0 is out! Barring any crazy bugs 🐛, 🙏 napari 0.6.0 should be out next week, Apr 30.
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napari @napari.fosstodon.org.ap.brid.gy · 23/04/2025
Our next Atlantic community meeting is coming up! Wed 8:30am SFO / 11:30am NYC / 5:30pm Paris. Come chat with core devs about napari 0.6.0 (due imminently! 😅), ask for advice, demo your cool plugin! Agenda: hackmd.io/BXWDZ3i8Q6OAEASrkaSNIQ Zoom […]
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Juan Nunez-Iglesias @jni.fosstodon.org.ap.brid.gy · 17/04/2025
Many folks are hurting right now, but there are pockets of opportunity… Are you an organisational powerhouse with a passion for open source and open science? @NumFOCUS, which supports projects including @numpy, @Spyder, @napari and many more, is looking for its next Executive Director. A *lot* […]
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napari @napari.fosstodon.org.ap.brid.gy · 15/04/2025
Hello all, Hopefully the last community meeting now before 0.6.0 lands 😅 This has been a lot of hard work the last weeks by multiple people! Want to discuss the release or have any napari questions for core devs or want to show a cool demo? Come join tomorrow! […] [Original post on fosstodon.org]
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napari @napari.fosstodon.org.ap.brid.gy · 11/04/2025
It's taking us some time but it's gonna be worth the wait we promise! 😅 napari 0.6.0a1 is out now! You can install it with `pip install "napari>=0.6.0a1"`. The full release notes are here: napari.org/0.6.0/release/release_0_… But to save you a click here's a short thread: 👇
napari.org
napari 0.6.0 — napari
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napari @napari.fosstodon.org.ap.brid.gy · 08/04/2025
Our Atlantic community meeting is tomorrow, April 9, 5:30PM CET, 8:30AM PT. We will discuss bringing the web to napari (see the very rudimentary initial example below)! We know you have been asking for bringing napari to the web for a long time. We are planning on it! In the meantime, we bring […]
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Original post on fosstodon.org
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napari @napari.fosstodon.org.ap.brid.gy · 31/03/2025
Another community contribution! Taking screenshots of regions of interest has been made a lot easier with help of our community member Sesan Ajina! Here, a code example: napari.org/dev/gallery/... Soon, more on how we are making publication ready figures easier with help of our community members!
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napari @napari.fosstodon.org.ap.brid.gy · 25/03/2025
Hello all, We are now very close to landing 0.6.0. Here is your last chance to give feedback and report your issues at the community meeting at 8:30am SFO / 11:30am DC / ⚠️ 3:30pm London / 4:30pm Paris ⚠️ . Agenda: hackmd.io/BXWDZ3i8Q6OAEASrkaSNIQ […] [Original post on fosstodon.org]
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napari @napari.fosstodon.org.ap.brid.gy · 23/03/2025
Sometimes, our community contributions don't have a graphical example, but are definitely worth highlighting! Did you know that thanks to Sammy Hansali's PR (github.com/napari/napar...), napari supports saving image files > 4GB?
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napari @napari.fosstodon.org.ap.brid.gy · 20/03/2025
Gearing up for our 0.6.0 release now we have the alpha release out, it is time to look back on some of the awesome features implemented by contributors of the community since 0.5.0. First off an awesome contribution) by GitHub user beanli161514 to enable 3D […] [Original post on fosstodon.org]
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napari @napari.fosstodon.org.ap.brid.gy · 12/03/2025
Please hold while we ready the 0.6.0 release… 😅 In the meantime, though, come to our latest Atlantic community meeting and hear all about it! 8:30am SFO / 11:30am DC / ⚠️ 3:30pm London / 4:30pm Paris ⚠️ (note the altered Europe times due to the DST […] [Original post on fosstodon.org]
Image of a PAL test pattern inside a napari viewer. Image source: https://en.wikipedia.org/wiki/Test_card
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napari @napari.fosstodon.org.ap.brid.gy · 18/02/2025
Our next community meeting is coming up! Join us at 9am CET (Paris/Warsaw/etc) / 1:30pm IST (Delhi) / 7pm AEST (Melbourne). Zoom: numfocus-org.zoom.us/j/83351642622?… Agenda: hackmd.io/9vo_DiJpSfuUExeGqVHbDQ Community meetings are a resource […]
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napari @napari.fosstodon.org.ap.brid.gy · 12/02/2025
Hi naparistas! A reminder that all are welcome at our next (Atlantic) community meeting, Feb 12, 8:30am SFO / 11:30am NYC / 5:30pm Paris. Agenda and details here: hackmd.io/BXWDZ3i8Q6OAEASrkaSNIQ Community meetings are for every napari user and developer. Get a chance to speak with […]
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Kyle Harrington @kisharrington.mastodon.social.ap.brid.gy · 05/02/2025
TL;DR installers are really challenging to make. The team made some tooling for @napari that was so fantastic that it is spreading across the scientific python ecosystem! labs.quansight.org/blog/napari-cond…
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napari @napari.fosstodon.org.ap.brid.gy · 20/01/2025
Hello naparistas! In recent months, core dev @czaki has been hard at work to improve the performance of our Shapes layer. We've now released napari 0.5.6rc0 with the option to turn on C++ acceleration of Shapes layer startup time. If you use the Shapes layer please help us with testing! Check […]
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Kyle Harrington @kisharrington.mastodon.social.ap.brid.gy · 29/12/2024
I made some updates to the tiled rendering branch in @napari. If you have uv installed, then this should open the mouse liver FIB-SEM dataset from OpenOrganelle: uv run atrium.kyleharrington.com/visualiza… s3 […] [Original post on mastodon.social]
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Beth Cimini 🔬💻📊 @bethcimini.bsky.social · 16/12/2024
New Year, new job? Delighted to announce two early-career-level (post-BA/BS or MA) positions in my lab, and an open call for computational postdocs at the Broad! First, an image analysis associate - work on high content screens for all kinds of cells and dimensionalities! See more at link (1/4)
docs.google.com
Image analysis associate job description
Image Analysis Associate Broad Institute of MIT and Harvard, Cambridge, MA Impact the discovery of new disease therapies in the Cimini laboratory at the Imaging Platform Join our vibrant, world-clas...
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Beth Cimini 🔬💻📊 @bethcimini.bsky.social · 16/12/2024
Second, we're looking for an Associate Software Engineer to work on CellProfiler! Come make a difference on software that helps thousands of biologists around the world every year. See link below for more info and to apply. (2/4)
broadinstitute.avature.net
Associate Software Engineer: Free and Open-source Biological Imaging Software
Impact the discovery of new disease therapies at the Cimini laboratory (Imaging Platform)Join our vibrant, world-class, non-profit biomedical research center, the Broad Institute!Our lab’s mission...
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Juan Nunez-Iglesias @jni.fosstodon.org.ap.brid.gy · 02/12/2024
@loicaroyer.bsky.social Neat! I'm curious about the rendering parameters/tricks e.g. to get such sharp lines at the big-cube borders — they (correctly?) look razor-thin in @napari. gist.github.com/jni/14f9fbf388b4e12…
screenshot of the napari viewer displaying a volume of x^y^z (where ^ denotes bitwise exclusive-or) for values in the range [0, 16).
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