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Microbial Systems Ecology Lab

@micsysecolab.bsky.social
414 followers 8 following 15 posts

We study general principles that organise microbial systems, at ETH Zürich and Eawag | Posts by group members mse.ethz.ch

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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 09/09/2026
Thrilled to share this perspective on functional redundancy in microbial communities, led by @annasophieweiss.bsky.social ! Check out Anna's thread below 👇
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 02/09/2026
Excited to share Rachel Szabo's new perspective: "How many ways are there to be a phage?". Here, we propose quantitative phage phenotyping as the foundation for a trait-based framework for phage ecology. Give it a read! ecoevorxiv.org/repository/v...
ecoevorxiv.org
How many ways are there to be a phage?
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 13/07/2026
Very happy to share Alyssa's Concepts & Synthesis piece, with @simonvanvliet.bsky.social ! We argue microbial interactions can be understood as modular processes, and that this helps us better characterize, model, and predict community dynamics. esajournals.onlinelibrary.wiley.com/doi/full/10....
esajournals.onlinelibrary.wiley.com
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Reposted by Microbial Systems Ecology Lab
Glen Dsouza @nonresidentdesi.bsky.social · 12/07/2026
Excited to share that I've been awarded a 5-year NIH MIRA (R35) from the National Institute of General Medical Sciences! The lab is growing! We're recruiting postdocs and research techs interested in microbial ecology, quantitative microscopy, microfluidics, and molecular biology. Please share!
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 10/07/2026
Excited to share our new paper! Emanuele and @benjaminraach.bsky.social combine experiments and modelling to show that phage-mediated lysis can increase the growth rate of surviving bacteria by releasing resources back into the environment. 👇 www.cell.com/iscience/ful...
cell.com
Phage-mediated lysis increases growth rate of surviving bacterial cells
Microbiology
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 08/07/2026
Delighted to share this review, which was recently published in its final form. We hope it will serve as a useful primer on community ecology for microbiologists, and were thrilled to have many of our group members involved in this piece! 🤩
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 11/06/2026
Very excited to share our new preprint, led by Alyssa Henderson! We ask why auxotrophy is so widespread in bacteria, and find that phylogeny is the dominant predictor of autotrophy, as opposed to environmental context. Check it out! 👇
doi.org
Amino acid auxotrophy is a feature of a distinct bacterial lifestyle across environments
Amino acid auxotrophy, the loss of biosynthetic potential for an amino acid, is a highly prevalent feature of microbial life, yet the evolutionary processes driving its distribution in nature remain u...
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 11/02/2026
Excited to share our new paper led by Divvya Ramesh: Limits to the evolution of metabolic dependency in spatially structured microbial communities 🧫 www.sciencedirect.com/science/arti...
sciencedirect.com
Limits to the evolution of metabolic dependency in spatially structured microbial communities
In microbial communities, evolutionary processes can lead to loss of biosynthetic pathways, creating metabolic dependencies. The Black Queen Hypothesi…
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 04/07/2025
We are incredibly grateful to have spent three inspiring days in beautiful Blonay at our annual group retreat, discussing science and continuing our group tradition of forming human pyramids! 🤸
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 13/06/2025
Excited to share our new work! We found that bacteria can turn antagonism into a foraging strategy - by killing their neighbours, and eating their remains 🧫🔬💥
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 13/05/2025
How does metabolic dependency evolve at the single cell level? 🔄 In our new preprint, Divvya Ramesh combines microfluidics, microscopy and modelling to show that the benefits of gene loss are highly context dependent. Check it out here: www.biorxiv.org/content/10.1...
biorxiv.org
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Reposted by Microbial Systems Ecology Lab
Ákos T Kovács @evolvedbiofilm.bsky.social · 01/04/2025
Olga Schubert from @eawag.bsky.social / @ethzurich.bsky.social on Causes and consequences of collective metabolism in microbial communities #KNVM2025
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 20/02/2025
Check out our new perspective on spatial patterns in microbial communities, the product of an exciting collaboration led by Alyssa Henderson and @adelpanta.bsky.social ! 🧫
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 26/11/2024
We are so thrilled that Martin and Olga have won the Art of Leadership (ALEA) award - for being incredible group leaders who give us independence, support, trust, and ultimately prioritise our wellbeing above all else. We are so grateful to be co-led by them!
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 26/11/2024
Thrilled to announce that Matthias Hülsmann's new perspective is now out in @naturemicrobiol.bsky.social! This exciting work is shaping how our group thinks about collective microbiome metabolism. Check it out! www.nature.com/articles/s41...
nature.com
A framework for understanding collective microbiome metabolism - Nature Microbiology
This Perspective explores why microbiome members perform partial metabolism of substrates and suggests that proteome efficiency is a driver of collective microbiome metabolism.
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 18/11/2024
Check out this new preprint on antagonism as a foraging strategy, led by the brilliant Astrid Stubbusch and @nonresidentdesi.bsky.social!
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Reposted by Microbial Systems Ecology Lab
Anna S. Weiss @annasophieweiss.bsky.social · 29/10/2024
Grateful for the opportunity to share my enthusiasm and thoughts on microbial ecology and bacterial communities in Cell Systems! What an exciting time to contribute to this fascinating field and to adress the „macro in the micro“. www.cell.com/cell-systems...
cell.com
How can concepts from ecology enable insights about cellular communities?
Historically, microbiology has been markedly concerned with pathogens and their modes of action. Upon Koch’s revolutionary finding that microorganisms can be causal of disease, understandably, there w...
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Microbial Systems Ecology Lab @micsysecolab.bsky.social · 28/10/2024
Check out our new paper, led by Astrid Stubbusch and @nonresidentdesi.bsky.social on bacterial degradation-dispersal cycles, out in @elife.bsky.social!
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