Calculation of the Percentage of Conserved Proteins following Qin, Xie et al. 2014 but using DIAMOND instead of BLASTP for alignments. - hoelzer/pocp

Offizieller Kanal des UBA. Als Deutschlands zentrale Umweltbehörde kümmern wir uns darum, dass es in Deutschland eine gesunde Umwelt gibt, in der Menschen so weit wie möglich vor schädlichen…

Oh, Hölzer et al., discuss the multidisciplinary approach used for monitoring the genomic and virological evolution of SARS-CoV-2 during the COVID-19 pandemic and its implications on public health in ...

The 2022 global mpox outbreak underscored the challenge of distinguishing between monkeypox virus infection and vaccination-induced immunity due to cross-reactive antibodies. Here, the authors develop...

Scientific Data - A whole-genome sequencing dataset of nanopore raw signals for bacterial genotyping and methylation analysis

About EMBL-EBI EMBL’s European Bioinformatics Institute is a data powerhouse, utilised on a global scale to advance scientific discovery through bioinformatics and solutions to some of the world’s mos...

The Max Delbrück Center for Molecular Medicine in the Helmholtz Association aims to transform tomorrow’s medicine through our discoveries of today. At locations in Berlin-Buch, Berlin-Mitte, Heidelberg and Mannheim, our scientists collaborate across disciplines to unravel the complexities of disease at the systems level – from molecules and cells to organs and entire organisms. Through strong academic, clinical, and industry partnerships, as well as global networks, we translate biological insights into innovations for early detection, individualized therapies, and disease prevention.

Contribute to rki-mf1/ont-methylation development by creating an account on GitHub.

Background Bacterial genome exploration and outbreak analysis rely heavily on robust whole-genome sequencing and bioinformatics analysis. Widely-used genomic methods, such as genotyping and detection…

In this study, the authors report the CoVerage tool ( www.sarscoverage.org ) for viral genomic surveillance and show that it predicted SARS-CoV-2 Variants of Concern, of Interest and under Monitoring together with their antigenic and evolutionary alterations almost three months prior to their WHO designation.

A LaTeX template for a basic DFG (Deutsche Forschungsgemeinschaft, German Research Foundation) grant proposal. - hoelzer/dfg

Impressum (DE) / Imprint (EN) Datenschutz (DE) / Data protection (EN)

AlphaFold - A practical guide

Pathoplexus is a new, open-source database dedicated to the efficient sharing of human viral pathogen genomic data, fostering global collaboration and public health response.

Fear of stigma poses a challenge in tracking the 2022-outbreak of monkeypox virus (MPXV) infection. Patients shed MPXV via skin lesions, gastrointestinal route, and seminal fluids into the…

Wastewater-based epidemiology has already proven to be a powerful tool to monitor the spread of a number of diseases. This Perspective discusses the integration with machine learning, highlighting its...

Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses. - jonas-fuchs/varVAMP

A pure CSS toggle switch for form input checkboxes

A systematic analysis of 115 mammalian genomes, including 10 new bat genomes, reveals prevalent positive selection in immune genes in bats and shows key adaptations in the antiviral gene ISG15 that ai...

Unlocking New Frontiers in Pandemic Surveillance with Bioinformatics and Big Data Proud to share the latest achievement of a talented young research team in…