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LIBD rstats club

@libdrstats.bsky.social
254 followers 93 following 28 posts

Researchers at the @lieberinstitute.bsky.social learning, blogging & talking about #rstats, 📦s, @Bioconductor.bsky.social, #bioinformatics (our own opinions) Admin: @lcolladotor.bsky.social lieberinstitute.github.io/rstatsclub

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LIBD rstats club @libdrstats.bsky.social · 28/01/2026
@nick-eagles.bsky.social concluded that scratch space location matters significantly for performance 💾⚡. He explained his motivation: he had a real use case with hundreds of millions of rows 📊 that originally took Full length video: youtu.be/ikumz_QLZiE #RStats #dplyr #duckplyr #rpolars #data.table
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LIBD rstats club @libdrstats.bsky.social · 28/01/2026
@nick-eagles.bsky.social introduced his presentation on benchmarking #dplyr alternatives 📊💻. He planned to review public benchmarks of various data manipulation packages 📦 as well as his own custom benchmark results 🔬 Full length 🎥: youtu.be/ikumz_QLZiE #RStats #dplyr #duckplyr #rpolars #data.table
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LIBD rstats club @libdrstats.bsky.social · 27/01/2026
@geopertea.bsky.social discussed how the AI provides semantic understanding of code 🧠💻, showing how objects are generated from different parts of the codebase 🔗. He acknowledged that you can do this manually too 👨‍💻, and sometimes manual inspection might ... #RStats #PositronIDE @posit.co
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LIBD rstats club @libdrstats.bsky.social · 27/01/2026
@geopertea.bsky.social showed his chat history 📜 and explained a useful use case: he asked the AI to look into a repository 🔍 and tell him what methods they were using for calculations 🧮. Basically, he had the AI read the code and summarize it for him 📝✨. #RStats #Positron #PositronAI
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LIBD rstats club @libdrstats.bsky.social · 27/01/2026
@geopertea.bsky.social explained how you can add your own custom agents 🤖 to #Positron & showed the interactive way to configure them 🛠️. He demonstrated how the "plan" agent is defined, noting that it doesn't use any file mod tools 📝❌ - it's specifically designed for planning purposes 📋 #RStats
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LIBD rstats club @libdrstats.bsky.social · 27/01/2026
@geopertea.bsky.social demonstrated setting up #Positron IDE 💻 by first detecting local interpreters and updating extensions 🔧. He showed how to login to @github.com to activate GitHub Copilot connectivity 🤖 for the Positron assistant. During the new installation, the app provides an... #RStats
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LIBD rstats club @libdrstats.bsky.social · 07/11/2024
Check the Zoom AI summary below:
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LIBD rstats club @libdrstats.bsky.social · 15/05/2024
Check out the updates to #spatialLIBD that Nick-Eagles @github.com introduced to the latest version available from #Bioconductor 3.19 release Visualize multiple genes with the #spatialLIBD::vis_gene() family of functions research.libd.org/spatialLIBD/... #rstats youtu.be/_dBPZ62t40c
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