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Kaili Fan

@kailifan.bsky.social
227 followers 208 following 15 posts

Bioinformatician & computational biologist. Studying gene regulation with a focus on genomic and epigenomic dynamics Postdoc in Buenrostro lab @harvard, Broad | PhD alumni of Weng lab @UMassChan www.kaili-fan.com

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Kaili Fan @kailifan.bsky.social · 05/10/2026
1/13 The human body runs on one genome—but every cell reads it differently. How? To find out, we need to measure both gene expression and chromatin accessibility in the same nucleus. So we did, across 21 adult tissues and nearly half a million nuclei. 🧵 🔗 www.biorxiv.org/content/10.6...
biorxiv.org
Single-Nucleus Multi-Omic Atlas Maps Regulatory Architecture and Non-Coding Variant Effects across Adult Human Tissues
Diverse human cell types establish specialized functions through lineage- and context-specific regulatory programs. Interpreting non-coding genetic risk requires integrated multi-omic reference maps t...
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Reposted by Kaili Fan
UMass Chan Medical School @umasschan.bsky.social · 17/03/2025
Working with a team at the University of Queensland, UMass Chan scientists have discovered that a population of koalas has evolved genomic immunity to a retrovirus: direc.to/mDfy #koalas @lubanlab.bsky.social @tianxiong-bear-yu.bsky.social
William E. Theurkauf, PhD; Jeremy Luban, MD; Tianxiong Yu, PhD; and Zhiping Weng, PhDA koala
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Kaili Fan @kailifan.bsky.social · 09/03/2025
🌟 Check out this fascinating study exploring how genomes combat real-time virus invasions—a UNIQUE approach to studying evolution as it happens! Huge congratulations to @tianxiong-bear-yu.bsky.social and the entire team for yet another set of remarkable findings! 🎉🎉
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Kaili Fan @kailifan.bsky.social · 16/01/2025
Thrilled to join this incredible project! Stay tuned for exciting discoveries ahead!
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Reposted by Kaili Fan
Tim Coorens @timcoorens.bsky.social · 15/01/2025
Our new perspective article describing the human and non-human primate developmental GTEx projects is now out in @nature.com! We outline the scope, vision, opportunities and challenges of these projects here: www.nature.com/articles/s41...
nature.com
The human and non-human primate developmental GTEx projects - Nature
The developmental Genotype-Tissue Expression (dGTEx) projects will catalogue and integrate gene expression, regulation and genetics data across 120 human donors from birth to adulthood with developmen...
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