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Jason Derks

@jasonderks.bsky.social
21 followers 22 following 7 posts

Increasing throughput of proteomics @parallelsq.bsky.social‬

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Reposted by Jason Derks
Harrison Specht @harrisons.bsky.social · 24/10/2025
A bit dense, but the important message is dead simple: We got to cite the E = mc² paper! Kidding :) The important part is that combinations of isotopes unlock 100-1000x gains in protein measurement speed. Here's how: www.biorxiv.org/content/10.1... #TeamMassSpec #Proteomics 🧪
biorxiv.org
How to design 1000-plex mass tags using the differential mass defect
Multiplexing samples in mass spectrometry-based proteomics has long been accomplished by isotopologues of small molecules. These chemically-identical "mass tags" conjugate to peptides to encode sample...
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Reposted by Jason Derks
🎶Jaaane says... 🎶 🇨🇦 @cportgrrl.bsky.social · 29/05/2025
The hits keep on coming from @parallelsq.bsky.social! Today we released an exciting use-case for plexDIA in single cell analysis of #alzheimer's disease, characterizing dysregulation of the 20S proteasome. #TeamMassSpec #Proteomics www.biorxiv.org/content/10.1...
biorxiv.org
Ubiquitin-Proteasome System Dysregulation in Alzheimer's Disease Impacts Protein Abundance
Alzheimer's disease (AD) is a relentlessly progressive, fatal neurodegenerative disorder associated with widespread aberrant proteomic changes. The full extent of protein dysfunctions in AD and their ...
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Jason Derks @jasonderks.bsky.social · 28/05/2025
Members of PTI have developed mass tags which improve spectral quality and enable 9-plexDIA in a project lead by @harrisons.bsky.social
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Jason Derks @jasonderks.bsky.social · 28/05/2025
We are excited to introduce ‘time’ as a new domain for proteomics multiplexing! It enables: -Label-free multiplexing -Combinatorial multiplexing with plexDIA Using combined 9-plexDIA and 3-timePlex we demonstrate 27-plex DIA 🚀
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