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Gili Greenbaum

@gilig.bsky.social
176 followers 59 following 15 posts

Population genetics, computational & mathmatical biology, conservation genomics, human evolution. Assistant Professor at the Hebrew University of Jerusalem

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Reposted by Gili Greenbaum
Laura Bertola @lauradbertola.bsky.social · 20/02/2026
Network-based genetic monitoring of landscape fragmentation www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Reposted by Gili Greenbaum
David Gokhman @david-gokhman.bsky.social · 27/08/2025
Denisovans or their close relatives identified in the fossil record using a gene regulatory phenotyping method. Now out: www.pnas.org/doi/10.1073/...
Credit: Maayan Harel
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Reposted by Gili Greenbaum
Moi Expósito-Alonso (MOILAB) @mexpositoalonso.bsky.social · 04/08/2025
*ALERT! GLOBAL GENETIC DIVERSITY TREND RE-ANALYSIS* "Signals of consistent genetic diversity decline are not yet measurable in global meta-analysis" doi.org/10.1101/2025...
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Gili Greenbaum @gilig.bsky.social · 01/08/2025
🧵 Excited to share a new preprint from our lab looking into signals of disease-burden in aDNA (doi.org/10.1101/2025...)! It has long been speculated that transition to sedentary, agricultural and urbanized lifestyle increases disease burden, but can we see this in aDNA?
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David Gokhman @david-gokhman.bsky.social · 26/07/2025
Given two genomes, can you tell who’s taller or more prone to a disease? How confident can you be? A fresh take on phenotypic inference, now out: rdcu.be/exW4f See thread🧵👇:
rdcu.be
Predicting the direction of phenotypic difference
Nature Communications - Here authors reveal a method to predict key information on phenotypes - their direction. This is achievable even for phenotypes with incomplete genotype-to-phenotype...
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Reposted by Gili Greenbaum
Maike Morrison @maikemorrison.bsky.social · 14/03/2025
1/ Hey y'all, I'm excited to share my latest paper, which is out now in PNAS! We introduce FAVA, a statistical framework to measure compositional variability across microbiome samples. If you want to measure variability across a stacked bar plot, FAVA is for you! Paper: doi.org/10.1073/pnas...
5 relative abundance plots arranged to have increasing compositional variability (variability across relative abundance samples, here vertical bars)
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Gili Greenbaum @gilig.bsky.social · 13/02/2025
New paper on the evolution of sociaility in bees by Ohad Peled, with Guy Bloch, is out on Current Biology! We took a data-driven approach to the classification of social level, and studied the evolutionary history of the social phenotpic space. Read all about it: shorturl.at/7J5zx
Ancestral reconstruction of social complexity mapped onto the PCA representing the phenotypic space of sociality in bees.
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Gili Greenbaum @gilig.bsky.social · 06/01/2025
Excited to present modelRxiv, dedicated to ecological and evolutionary models, now in Ecology Letters! LLMs now make this idea feasible: a single interactive repository for models written in different languages. Let us know if you have feedback or want help adding in your models tinyurl.com/yp75n7ws
onlinelibrary.wiley.com
modelRxiv: A Platform for the Dissemination and Interactive Display of Models
modelRxiv is an interactive repository of eco-evolutionary models that enables readers to access published and unpublished models without the technical hurdles of understanding model code. The platfo...
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Reposted by Gili Greenbaum
Joanna Masel @joannamasel.bsky.social · 19/12/2024
Save the dates June 2-6 for the second annual meeting of @smtpb.bsky.social on Modeling and Theory in Population Biology, hosted in Chicago by @nitmb.bsky.social. More details coming later. www.nitmb.org/modeling-and...
nitmb.org
Modeling and Theory in Population Biology | NITMB
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David Gokhman @david-gokhman.bsky.social · 27/11/2024
Interested in discovering the genetic changes that made us human? Our lab is looking for students and postdocs! 👩‍🔬👨‍🔬 gokhmanlab.com please RT!
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Ellie Armstrong @elliecat.bsky.social · 29/11/2024
our article on selecting diagnostic SNPs (and accompanying pipeline) is now online at MER. We are excited that it is getting so much use already and look forward to extending it for more use cases in the near future! Thanks to all for helpful feedback. onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
A Pipeline and Recommendations for Population and Individual Diagnostic SNP Selection in Non‐Model Species
Despite substantial reductions in the cost of sequencing over the last decade, genetic panels remain relevant due to their cost-effectiveness and flexibility across a variety of sample types. In part...
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