iiinova — where your digital self keeps evolving

Reposted by Gisela Gabernet

AIRR-Community @airr-community.bsky.social · 11/09/2026

✨ The AIRR-C Seminar Series is back! ✨ Join us live on September 24th at 10am ET / 4pm CEST for the AIRR Community Seminar Series with Dr. Michael Birnbaum and Dr. @dduchen.bsky.social. 👉 Find more information and register here: www.antibodysociety.org/the-airr-com... #ImmunoSky

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Reposted by Gisela Gabernet

Gregor Sturm @grst.bsky.social · 29/05/2026

Happy to announce the release of IggyTop, a metadatabase for immune receptor–epitope interactions. It's integrated with scirpy v0.24 so you can readily use it to annotate your single-cell TCR datasets. iggytop.readthedocs.io/en/latest/

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Gisela Gabernet @ggabernet.bsky.social · 16/04/2026

At #AAI2026 and working with BCR or TCR sequencing data? Do you know that IG genotyping can help improve the quality of your data? Come talk to us at poster 172 at 2:30-3:30 today for an introduction to nf-core/airrflow, a workflow using the Immcantation framework with genotyping functionality!

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Gisela Gabernet @ggabernet.bsky.social · 01/03/2026

Join us this June at Yale for the AIRR Community Meeting VIII, gathering experts in AIRR research around the world!

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Gisela Gabernet @ggabernet.bsky.social · 20/01/2026

Join us for the Immcantation Users meeting this Thursday, featuring interesting talks on scientific projects including BCR and TCR data analysis using Immcantation! It's not too late to register ✍️

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Gisela Gabernet @ggabernet.bsky.social · 09/09/2025

Do you want to share your research using Immcantation? Abstract submission for the Immcantation Users Meeting 2026 is now open until October 1st!

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Gisela Gabernet @ggabernet.bsky.social · 28/05/2025

Interested in analyzing BCR / TCR single-cell or bulk datasets? Join the hands-on training on using nf-core/airrflow, a Nextflow pipeline to process start-to-finish AIRRseq data using the Immcantation framework. 🕑 June 12th 10-11:30 ET 💻 Virtual 💸 It's free! Registration: nf-co.re/events/2025/...

nf-core/airrflow metro map showing the included analysis steps.

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Gisela Gabernet @ggabernet.bsky.social · 04/05/2025

At #AAI2025 and interested in high-throughput BCR/TCR single cell and bulk data analysis? Come talk to me at poster #408 from 14:15 to 15:30! I’ll be presenting nf-core/airrflow, a Nextflow workflow using the Immcantation framework @immcantation.bsky.social @nf-co.re

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Gisela Gabernet @ggabernet.bsky.social · 31/03/2025

Do you analyze large BCR and TCR sequencing datasets? Answer our survey for improving nf-core/airrflow, a Nextflow pipeline to analyze bulk and single-cell AIRRseq data (doi.org/10.1371/jour...). We’re interested in your opinion on useful new features! yalesurvey.ca1.qualtrics.com/jfe/form/SV_...

doi.org

nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework

Author summary We have created nf-core/airrflow, a workflow to help researchers study the immune system in healthy and disease states, such as infections, autoimmunity, and cancer. The adaptive immune...

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Reposted by Gisela Gabernet

Marc Veldhoen @marcveld.bsky.social · 30/11/2024

Persistence of spike protein at the skull-meninges-brain axis may contribute to the neurological sequelae of COVID-19 Some unrest and abuse about this paper- Parts of the pre-print have been abused previously. What does it show? www.cell.com/cell-ho... 1/10

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Reposted by Gisela Gabernet

Itai Yanai @itaiyanai.bsky.social · 09/11/2024

Doing good science is 90% finding a science buddy to constantly talk to about the project.

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Reposted by Gisela Gabernet

Jamie Heather @jamieheather.bsky.social · 18/11/2024

Inspired by @rodrahimi.bsky.social 's noble efforts linking immunologists together over here, let's try and get more specifically TCR/BCR/AIRR/repertoire chat going with this starter park go.bsky.app/Gi2dcGd Drop me a beep to get added or suggest others!

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