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FSLeyes

@fsleyes.bsky.social

137 followers 113 following 4 posts

The FSL image viewer

Posts Replies Media

Reposted by FSLeyes

Steve Smith @fmrib-steve.bsky.social · 09/10/2026

Imaging Neuroscience: The First 3 Years—Editorial Thanks to our Editorial Board, reviewers, and authors, who trusted this would work, and moved with us to the new journal. It exists because the community supported the idea behind it; its success belongs to that community. doi.org/10.1162/IMAG...

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Paul Taylor @afni-pt.bsky.social · 31/08/2026

Have you ever felt like something was missing from your #fmri results? Have you been worried about potential reproducibility issues? Well, this new @natmethods.nature.com article with 40+ coauthors shows how the simple change to transparent thresholding helps both. Go Figure! rdcu.be/B4tikBETdQZa

A comparison of old and new thresholding approaches for fMRI data. The newer, transparent thresholding allows for interpreting context, more complete modeling, a reduction of biases and an increase in meaningful content. This all leads to more accurate interpretations and improved reproducibility evaluations.

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FSLeyes @fsleyes.bsky.social · 03/07/2026

A new FSLeyes is out (v1.20.0) with support for .trx tractography files (thanks @arokem.org !) and MRtrix3 .mif files. Full details at open.oxcin.ox.ac.uk/pages/fsl/fs...

open.oxcin.ox.ac.uk

fsleyes release history — FSLeyes documentation

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NeuroFidelity @neurofidelity.bsky.social · 22/06/2026

Starting the #FSLCourse2026 in Bordeaux at the Intercontinental Hotel.

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Oxford University Centre for Integrative Neuroimaging (OxCIN) @oxcin.bsky.social · 18/03/2026

Register now for the in-person FSL Course 2026 in Bordeaux, France! 🗓️ June 22-26, 2026 🧠 Covering: lectures & hands-on practicals on structural, functional, diffusion and resting state brain image analysis 🔗 open.oxcin.ox.ac.uk/pages/fslcou...

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FSLeyes @fsleyes.bsky.social · 10/09/2025

A new FSLeyes is out, with a few bug fixes, and one new feature - you can now modulate line vector width by another image (or modulate the line length, opacity, or brightness). Full changelog at open.win.ox.ac.uk/pages/fsl/fs...

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Oxford University Centre for Integrative Neuroimaging (OxCIN) @oxcin.bsky.social · 08/05/2025

Registration Open! FSL Course 2025 will be held fully online, 15th – 26th September. Details & registration info here: open.win.ox.ac.uk/pages/fslcou... The course covers lectures & hands-on practicals on structural, functional, diffusion and resting state brain image analysis.

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Paul Taylor @afni-pt.bsky.social · 11/04/2025

The result of a large (42 authors!) collaboration: "Go Figure: Transparency in neuroscience images preserves context and clarifies interpretation" arxiv.org/abs/2504.07824 TL;DR: The FMRI world can (and should) improve results interpretation and reproducibility *today*, via transparent thresholding.

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FSLeyes @fsleyes.bsky.social · 16/03/2025

Let me know if you think of any improvements that could be made!

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FSLeyes @fsleyes.bsky.social · 25/02/2025

A new FSLeyes is out, with improved support for tractograms - it is now possible to display 3D tractograms in 2D (ortho and lightbox) views. Details at open.win.ox.ac.uk/pages/fsl/fs.... Thanks to dipy and mrtrix3 for some example data sets. Also, hello bluesky!

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