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FSLeyes

@fsleyes.bsky.social

137 followers 113 following 4 posts

The FSL image viewer

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Paul Taylor @afni-pt.bsky.social · 31/08/2026

Have you ever felt like something was missing from your #fmri results? Have you been worried about potential reproducibility issues? Well, this new @natmethods.nature.com article with 40+ coauthors shows how the simple change to transparent thresholding helps both. Go Figure! rdcu.be/B4tikBETdQZa

A comparison of old and new thresholding approaches for fMRI data. The newer, transparent thresholding allows for interpreting context, more complete modeling, a reduction of biases and an increase in meaningful content. This all leads to more accurate interpretations and improved reproducibility evaluations.

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FSLeyes @fsleyes.bsky.social · 03/07/2026

A new FSLeyes is out (v1.20.0) with support for .trx tractography files (thanks @arokem.org !) and MRtrix3 .mif files. Full details at open.oxcin.ox.ac.uk/pages/fsl/fs...

open.oxcin.ox.ac.uk

fsleyes release history — FSLeyes documentation

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NeuroFidelity @neurofidelity.bsky.social · 22/06/2026

Starting the #FSLCourse2026 in Bordeaux at the Intercontinental Hotel.

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Oxford University Centre for Integrative Neuroimaging (OxCIN) @oxcin.bsky.social · 18/03/2026

Register now for the in-person FSL Course 2026 in Bordeaux, France! 🗓️ June 22-26, 2026 🧠 Covering: lectures & hands-on practicals on structural, functional, diffusion and resting state brain image analysis 🔗 open.oxcin.ox.ac.uk/pages/fslcou...

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FSLeyes @fsleyes.bsky.social · 10/09/2025

A new FSLeyes is out, with a few bug fixes, and one new feature - you can now modulate line vector width by another image (or modulate the line length, opacity, or brightness). Full changelog at open.win.ox.ac.uk/pages/fsl/fs...

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Oxford University Centre for Integrative Neuroimaging (OxCIN) @oxcin.bsky.social · 08/05/2025

Registration Open! FSL Course 2025 will be held fully online, 15th – 26th September. Details & registration info here: open.win.ox.ac.uk/pages/fslcou... The course covers lectures & hands-on practicals on structural, functional, diffusion and resting state brain image analysis.

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Paul Taylor @afni-pt.bsky.social · 11/04/2025

The result of a large (42 authors!) collaboration: "Go Figure: Transparency in neuroscience images preserves context and clarifies interpretation" arxiv.org/abs/2504.07824 TL;DR: The FMRI world can (and should) improve results interpretation and reproducibility *today*, via transparent thresholding.

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FSLeyes @fsleyes.bsky.social · 25/02/2025

A new FSLeyes is out, with improved support for tractograms - it is now possible to display 3D tractograms in 2D (ortho and lightbox) views. Details at open.win.ox.ac.uk/pages/fsl/fs.... Thanks to dipy and mrtrix3 for some example data sets. Also, hello bluesky!

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