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David Bauman

@davbauman.bsky.social
333 followers 299 following 29 posts

Plant ecologist | 🌳 demography | Processes shaping tropical forests and savannas 🌳🌿🌦️ | Causal Inference | Researcher at AMAP, @ird-fr.bsky.social (IRD). www.researchgate.net/profile/David-…

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Reposted by David Bauman
Daniela Nemetschek (Krebber) @danielanemetschek.bsky.social · 12/12/2025
Working with dendrometers or curious about dendrometer research? 🌱🌐🍁🌳 🚨 Join the Global Dendrometer Network 🚨 We’re building a global community using dendrometers to study plant growth, stress, phenology & more. Sign up for updates on meetings, data calls & more 👇 docs.google.com/forms/d/e/1F...
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David Bauman @davbauman.bsky.social · 27/10/2025
Read the full paper (open access) here: doi.org/10.1111/geb.70141 As for my fellow statistics/R/reproducible code lovers, you'll find the detailed commented R code (and data) for all analyses and figures here 🙃: zenodo.org/records/1704... 🧵9/9
zenodo.org
Data, R code, and model outputs for "Mosaic of size-dependent mortality in three ecologically and economically important pine species reveals patterns across space and time" (Bauman et al. 2025, Globa...
This repository provides the full research compendium (repository of data, code, model outputs, and figures) associated with the following peer-reviewed publication: Bauman, D., McMahon, S.M., & Johns...
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David Bauman @davbauman.bsky.social · 27/10/2025
We find that 🌳 demography is not uniform, even within a species’ range. Accounting for this mosaic of mortality can improve management & conservation of forests facing intensifying stressors, and stresses the crucial role of permanent plots across environmental gradients. @umramap.bsky.social 🧵8/9
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David Bauman @davbauman.bsky.social · 27/10/2025
🌎 Take-home message: To predict forest futures, we need to go beyond climate envelopes — including disturbances, pests, and ontogeny — if we want realistic models of mortality and carbon cycling. @ird-fr.bsky.social 🧵7/9
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David Bauman @davbauman.bsky.social · 27/10/2025
In contrast, in low-mortality years, competition was the main mortality agent, suggesting a prevalence of gap dynamics under low mortality years and regions. High-mortality patches, though, were dominated by disturbance agents like storms and insects. 🧵6/9
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David Bauman @davbauman.bsky.social · 27/10/2025
🔥 Pinus elliottii (slash pine) and P. palustris (longleaf pine) showed more localised spatial structures. Extreme weather events (storms, mostly) and fire dominated their high-mortality years (especially 2013–2023). 🧵5/9
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David Bauman @davbauman.bsky.social · 27/10/2025
🌳 Pinus taeda (loblolly pine) stood out: Its survival has clearly declined over the past two decades across its natural range. This pattern was spatially consistent and mostly linked to weather, insects, and competition. 🧵4/9
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David Bauman @davbauman.bsky.social · 27/10/2025
We found that mortality patterns form a mosaic across space and time — and change in nonlinear ways with tree size (ontogeny). 👉 Most interspecific differences appear in saplings (2.5 to 10 cm DBH) and near maximum tree size. 🧵3/9
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David Bauman @davbauman.bsky.social · 27/10/2025
Tree mortality isn’t random — it depends on who you are, where you grow, and what happens to you. We analysed demographic data from ~130,000 trees across 14,500 plots (years 2003–2023), looking at mortality agents like competition, storms, fire, insects, and disease. 🧵2/9
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David Bauman @davbauman.bsky.social · 27/10/2025
🌲 Very happy to share our new study on where, when, and why trees die across the range of 3 major southern US pines: Pinus taeda, P. palustris, and P. elliottii (loblolly, longleaf, and slash pine). 🔗 doi.org/10.1111/geb.70141 @ird-fr.bsky.social @umramap.bsky.social @ulbrecherche.bsky.social 🧵1/9
doi.org
Mosaic of Size‐Dependent Mortality in Three Ecologically and Economically Important Pine Species Reveals Patterns Across Space and Time
Aim Global forests face increasing stresses from novel climate states, altered disturbance regimes and the spread of pests and pathogens. Understanding where and when mortality occurs across species...
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David Bauman @davbauman.bsky.social · 22/10/2025
This follows our earlier Ecology Letters study showing that dead trees can influence neighbours even more than living ones. Forests have long memories — the "ghosts" of trees past still shape who grows, survives, and coexists. 🌳🌱 🔗 doi.org/10.1111/ele.... [3/3]
doi.org
The unexpected influence of legacy conspecific density dependence
The presence of dead conspecific neighbours significantly decreased tree survival. Negative legacy conspecific effects proved nearly four times stronger than living conspecific density effects. The l...
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David Bauman @davbauman.bsky.social · 22/10/2025
We’ve long known that young trees struggle near adults of the same species — this mechanism helps maintain diversity. But what if that effect doesn’t end when the adult tree dies? Turns out this "legacy effect" can last at least 5 years — even after the tree is dead 🌲 [2/3]
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David Bauman @davbauman.bsky.social · 22/10/2025
🌳 New paper out in Ecology Letters! 🌱 Our latest study, led by Lukas Magee, shows that the “legacies” of trees continue to shape forests long after they die. onlinelibrary.wiley.com/doi/10.1111/... #Ecology #Forests #Biodiversity @umramap.bsky.social @ird-fr.bsky.social A thread: [1/3]
onlinelibrary.wiley.com
Memories of Trees Past: Coexistence Implications of Legacy Conspecific Density Dependence
Negative density dependence persisted for up to 5 years after tree death, but with interspecific variation. Although stabilising niche differences were large, fitness differences–at the seedling life...
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Reposted by David Bauman
Nature Portfolio @natureportfolio.nature.com · 21/10/2025
A study in Nature reports that a transition from carbon sink to source for the aboveground woody biomass of moist tropical Australian forests has occurred, driven by increasingly extreme climate anomalies. go.nature.com/4ndWLmg ⚒️ 🧪
This is figure 3, which shows Queensland rainforest plot locations, long-term climate, and causal diagram of the hypotheses relating climate variations over time to ΔAGB.
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David Bauman @davbauman.bsky.social · 21/10/2025
Ahead of the EU Council meeting on 23 Oct., > 2178 scientists across Europe have signed an open letter urging heads of state and government to back a science-based 2040 climate target of > 90–95% domestic greenhouse gas reductions compared to the 1990s. doi.org/10.5281/zeno... @ird-fr.bsky.social
doi.org
Open letter by Scientists: Climate Neutrality is Europe's Greatest Economic Opportunity
The European Scientific Advisory Board on Climate Change advised that a 90%–95% net domestic reduction of greenhouse gases (GHG) until 2040 (compared to the 1990 baseline) is necessary in order to ach...
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Reposted by David Bauman
Nature @nature.com · 17/10/2025
Nature research paper: Aboveground biomass in Australian tropical forests now a net carbon source go.nature.com/3KRZ9BB
go.nature.com
Aboveground biomass in Australian tropical forests now a net carbon source - Nature
A transition from carbon sink to source for the aboveground woody biomass of moist tropical Australian forests has occurred, driven by increasingly extreme climate anomalies.
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Reposted by David Bauman
IRD @ird-fr.bsky.social · 17/10/2025
🌳 Selon une nouvelle étude les forêts tropicales d’Australie seraient les premières au monde à émettre davantage de carbone dans l’atmosphère qu’elles n’en absorbent. ℹ️ www.ird.fr/les-forets-t...
ird.fr
Les forêts tropicales d’Australie, premières à basculer de puits de carbone à émettrices de CO2 | Site Web IRD
Selon une nouvelle étude, les forêts tropicales d’Australie seraient les premières au monde à émettre davantage de carbone dans l’atmosphère qu’elles n’en absorbent.
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David Bauman @davbauman.bsky.social · 17/10/2025
⚠️ Our @theconversation.com explainer of the @nature.com paper—what changed in aboveground woody biomass and why it matters. Read 👇 theconversation.com/a-crucial-st... @ird-fr.bsky.social @umramap.bsky.social @edinburgh-uni.bsky.social @oxfordgeography.bsky.social @oxfordecosystems.bsky.social
theconversation.com
A crucial store of carbon in Australia’s tropical forests has switched from carbon sink to carbon source
The woody biomass of Australia’s tropical rainforests has already switched from carbon sink to carbon source – and the reason is climate change.
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David Bauman @davbauman.bsky.social · 17/10/2025
With #COP30 next month in Belém 🇧🇷, we hope this will be a wake-up call: tropical forests are under growing pressure from climate change. Safeguarding them demands ambitious and fair climate action, including stronger support for countries that protect these vital ecosystems for us all. 🌳🌡️📈 [5/5]
A research volunteer admires a large tree at a long-term research site in Australia’s tropical rainforest.
Credit: Andrew Ford
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David Bauman @davbauman.bsky.social · 17/10/2025
Of course, this doesn’t mean these forests have lost all climate value ➡️ they remain immense carbon stores and irreplaceable biodiversity havens. But it shows that keeping global warming well below 1.5 °C is now even harder—and more urgent. 🌏 [4/5]
Aerial view of Australia’s relict tropical rainforests, one of the oldest rainforests in the world.
Credit: Alexander ShenkinView through Australian old-growth tropical rainforest at a long-term research site, where individual trees are painted with identification numbers. 
Credit: Andrew Ford
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David Bauman @davbauman.bsky.social · 17/10/2025
Context: in 2022, our @nature.com study found a long-term increase in tree mortality in these forests, likely due to rising atmospheric water stress. 🔗 nature.com/articles/s41586-022-04737-7 This new paper follows up: aboveground biomass is now a net carbon emitter — driven by #ClimateChange. [3/5]
nature.com
Tropical tree mortality has increased with rising atmospheric water stress - Nature
Over the past 35 years, annual tree mortality risk has increased in the moist tropical forests of Australia and is associated with increased atmospheric water stress.
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David Bauman @davbauman.bsky.social · 17/10/2025
Based on 50 yrs of data from ~11 000 trees, we found that the aboveground woody biomass—once absorbing C—now now releases nearly 1 tonne of C per hectare each year. The cause? Human-driven climate change: hotter extremes, droughts & cyclones are killing more trees than the forest regrow. 🌡️🌪️ [2/5]
Aerial view of Australia’s relict tropical rainforests. A 49-year study reveals that aboveground biomass in these forests has switched from being carbon sink to a carbon source.
Credit: Alexander Shenkin @shenkin.bsky.social Aerial view of tropical rainforest canopy in Australia.
Credit: Alexander Shenkin @shenkin.bsky.social
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David Bauman @davbauman.bsky.social · 17/10/2025
🚨 New in @nature.com: Aboveground biomass in Australian tropical forests now a net carbon source. Led by Hannah Carle, with @umramap.bsky.social @ird-fr.bsky.social @edinburgh-uni.bsky.social @umdscience.bsky.social @westsyduhie.bsky.social @creaf.cat 👉 nature.com/articles/s41586-025-09497-8 [1/5]
nature.com
Aboveground biomass in Australian tropical forests now a net carbon source - Nature
A transition from carbon sink to source for the aboveground woody biomass of moist tropical Australian forests has occurred, driven by increasingly extreme climate anomalies.
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Reposted by David Bauman
UMR AMAP @umramap.bsky.social · 07/04/2025
Hello Bluesky! AMAP est une unité de recherche qui s'intéresse à la botanique et la modélisation de l'architecture des plantes et des végétations. AMAP regroupe des mathématiciens et informaticiens aux côtés de botanistes, agronomes & écologues 🌱🌿🌳🔬🛰️💻 amap.cirad.fr/fr/index.php #helloESR #botany
amap.cirad.fr
UMR AMAP
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David Bauman @davbauman.bsky.social · 15/12/2024
📄 Link to study: www.nature.com/articles/s41... With @josbarlow.bsky.social , @fplmelo.bsky.social , @erikaberenguer.bsky.social , @ird-fr.bsky.social , Universidade Federal de Pernambuco, @ecioxford.bsky.social , Lancaster University, Universidade Estadual de Santa Cruz, and several others. [5/5]
nature.com
Winner–loser plant trait replacements in human-modified tropical forests - Nature Ecology & Evolution
Tropical forest landscapes are increasingly being modified by human activities. Here the authors apply a causal inference approach to Neotropical forest data to disentangle the role of landscape-level...
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David Bauman @davbauman.bsky.social · 15/12/2024
These findings show how #causality can be inferred from observational data in #Ecology. Habitat loss, fragmentation, edge effects, degradation, and the functional make-up of tree communities have interdependencies, and require a #CausalModel to disentangle #causation from spurious association! [4/5]
Figure 1 of the study: Artistic causal diagram (Directed Acyclic Graph, #DAG) used in the study (design and drawings by Jannah Oliveira; obrigadão Jannah!) to illustrate our causal assumptions as to how the data-generation process underlying region-level human disturbance pressures, and tree community functional traits. This causal model was used to logically inform the content of our statistical models, with the aim to allow causal interpretations of the effects of interest.
@ird-fr@bsky.social
@oxfordecosystems.bsky.social
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David Bauman @davbauman.bsky.social · 15/12/2024
➡️ Highlights urgent need to conserve / restore #TropicalForests, prevent degradation, and implement measures to protect / boost populations of the large-bodied birds (e.g. toucans) and mammals (e.g. spider monkeys) that disperse the seeds of 'losing' slow-growing large-seeded tree species. [3/5]
Recent #deforestation in an already deforested and degraded human-modified landscape in the #Amazon. Credit: Flavio Forner and Rede Amazônia Sustentável.The hyper-fragmented landscape of the Serra Grande region in northeast Brazil, with forest fragments surrounded by sugar-cane plantations. Credit: Adriano Gambarini.
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David Bauman @davbauman.bsky.social · 15/12/2024
These 'winner-loser replacements' along these gradients of increasing human disruption are also likely to impact wildlife species adapted to consuming / dispersing the large seeds of tree species being lost in human-modified landscapes. [2/5]
An Agouti (Cutia sp.) carrying a large fruit of a Bertheletia excelsa (Brazil nut) in the Balbina region. Photo from a camera trap installed by Maíra Benchimol, one of the authors of the study.A Tayra (Eira barbara) carrying a large fruit of a large-seeded Sapotaceae tree in the Balbina region. Photo from a camera trap installed by Maíra Benchimol, one of the authors of the study.A logging patio helps demonstrate the extent of timber removal in the wider landscape in the Amazon. Credit: Flavio Forner and Rede Amazônia Sustentável.
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David Bauman @davbauman.bsky.social · 15/12/2024
New paper out in @natureecoevo.bsky.social, led by Bruno Pinho, showing how human disruption is driving 'winner' and 'loser' #tree species shifts across tropical forests. ➡️ Fast-growing / small-seeded species dominating Brazilian forests were levels of deforestation and degradation are high. [1/5]
Dead trees and a regenerating understorey demonstrate species turnover and winners and losers in the Amazon. Credit: Flavio Forner and Rede Amazônia Sustentável.
@ird-fr.bsky.social
@oxfordecosystems.bsky.social
@ecioxford.bsky.socialContrast between tropical forest edges and sugar-cane plantations in the Serra Grande region. Credit: Adriano Gambarini.
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David Bauman @davbauman.bsky.social · 14/12/2024
What a pleasure to be at #BES2024! Great presentations and people, but also lots of fun! I enjoyed presenting a poster on tropical #tree #demography and #ClimateChange, and discussing with colleagues, as well as people I met for the first time. My bowling 🎳, however, still needs a lot of work... 🙈
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Reposted by David Bauman
Oxford Ecosystems @oxfordecosystems.bsky.social · 10/12/2024
We've created an Ecosystems starter pack. Follow news directly from our associated researchers and centres easily. go.bsky.app/PbeNyob
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Laura Dee @lauradee.bsky.social · 13/12/2024
Foundations and future directions for causal inference in ecological research, forthcoming w/ @katherinesiegel.bsky.social: tinyurl.com/4mm57zzd. We wrote it based on our experience teaching causal inference to ecologists w/ some stuff we wish other papers had reviewed to share w/ the students 1/n
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Oxford Ecosystems @oxfordecosystems.bsky.social · 12/12/2024
What a great first day of #BES2024! The turn out to our talks was incredible, thank you for your feedback and questions! We learnt so much from the other sessions and talks during the day. Day two, let's go! @ymalhi.bsky.social @jedsol.bsky.social @davbauman.bsky.social @navarrosales.bsky.social
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David Bauman @davbauman.bsky.social · 10/12/2024
I was thrilled to give a seminar at @kewgardens.bsky.social last Fri, to discuss #tree #demography as a lens into tropical forest responses to #ClimateChange. It was great to meet colleagues, and to enjoy the oh-so-beautiful greenhouses 🌳🌴🌸🌵! 🙏 to Guillaume Delhaye for the invitation/organisation!
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David Bauman @davbauman.bsky.social · 10/12/2024
I'll be presenting on this at the #BES2024 conference this Thu, for those of that will be there, and want to talk tropical #tree #demography 🌳, or the importance of causal inference in Ecology 😁 @britishecolsoc.bsky.social
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David Bauman @davbauman.bsky.social · 10/12/2024
Lovely and nostalgic time visiting friends and colleagues at the @oxfordecosystems.bsky.social lab. Had the pleasure to present new results on tropical #tree growth and its cause-effect relations to climate anomalies across tropical climates. Always such a friendly and stimulating environment! 🌳🌡️☀️
@ecioxford.bsky.social
@ird-fr.bsky.social
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David Bauman @davbauman.bsky.social · 26/11/2024
Great #CESAB #R package and didactical tutorial to create reproducible code and projects!
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