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Conny WH Yu

@connyyu.bsky.social
106 followers 194 following 7 posts
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Conny WH Yu @connyyu.bsky.social · 09/03/2026
𝗚𝗶𝘁𝗛𝘂𝗯 𝗹𝗶𝗻𝗸: github.com/connyyu/pymo... 𝗠𝗼𝗿𝗲 𝗮𝗯𝗼𝘂𝘁 𝗦𝗜𝗙𝗧𝗦: www.ebi.ac.uk/pdbe/docs/si... #ProteinStructure #StructuralBiology #PyMOL #Bioinformatics #ComputationalBiology
github.com
GitHub - connyyu/pymol_sifts: Automatic protein labelling in PyMOL
Automatic protein labelling in PyMOL. Contribute to connyyu/pymol_sifts development by creating an account on GitHub.
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Conny WH Yu @connyyu.bsky.social · 09/03/2026
Have you ever looked at a protein structure and wondered... What am I even looking at? To help navigate, I wrote a PyMOL plugin that automatically identifies and labels protein chains. It leverages the 𝗦𝗜𝗙𝗧𝗦 𝗺𝗮𝗽𝗽𝗶𝗻𝗴 (from UniProt and PDBe) to colour and label protein chains by their UniProt IDs.
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Lori Passmore @lapassmore.bsky.social · 15/11/2025
This work is now officially published @natsmb.nature.com with some fun new analyses included in the revised version. Congratulations to all the authors! @connyyu.bsky.social @rappsilber.bsky.social @lrsinn.bsky.social @fjoreilly.bsky.social www.nature.com/articles/s41...
nature.com
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Conny WH Yu @connyyu.bsky.social · 06/11/2025
And it's now live in Nature Structural & Molecular Biology! Many thanks to James and @lapassmore.bsky.social for a great collaboration. www.nature.com/articles/s41...
nature.com
Phosphorylation-dependent tuning of mRNA deadenylation rates - Nature Structural & Molecular Biology
Stowell et al. show that the intrinsically disordered region (IDR) of Puf3 binds the Ccr4–Not deadenylase complex using an extended interface. Phosphorylation of the IDR regulates the interaction to t...
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Conny WH Yu @connyyu.bsky.social · 25/06/2025
To me, Mad2 also serves as a reminder that proteins are dynamic and that there is still so much to explore in structural biology. Finally, a huge shoutout to my longtime collaborators Élyse Fischer and David Barford. Thank you both for this MAD journey!
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Conny WH Yu @connyyu.bsky.social · 25/06/2025
A very late repost: Mad2 is an incredible metamorphic protein capable of adopting multiple conformations. Here we reviewed existing structural data and investigated this ever-changing protein using a combination of real-time NMR and MD simulations (kudos to Joe! @jgreener64.bsky.social)
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Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 27/11/2024
🚨 New from PDBe! Check out the revamped PDBeChem service with enhanced Ligand Pages! 🔍 Explore detailed ligand data, interaction stats, bound structures, related ligands, and more—all in one place. 👉 Read more in the news: buff.ly/4g8eF6E
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Alex Bateman @alexbateman1.bsky.social · 18/11/2024
Happy to announce that the latest UniProt NAR paper is now out. Find out what we've been up to here academic.oup.com/nar/advance-...
academic.oup.com
UniProt: the Universal Protein Knowledgebase in 2025
Abstract. The aim of the UniProt Knowledgebase (UniProtKB; https://www.uniprot.org/) is to provide users with a comprehensive, high-quality and freely acce
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Lori Passmore @lapassmore.bsky.social · 21/10/2024
In this work, James used NMR with @connyyu.bsky.social , crosslinking mass spec with the Rappsilber lab and biochemical reconstitution to discover that dispersed regions within the IDRs interact with multiple conserved binding sites on Ccr4-Not.
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Conny WH Yu @connyyu.bsky.social · 16/12/2023
... who know how to make creative use of the surprises that they encounter when they do so. These are the people who make the enduring difference." - Aaron Klug www.nature.com/articles/nrm...
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Conny WH Yu @connyyu.bsky.social · 16/12/2023
"You cannot by sheer force compel scientific truths to reveal themselves. The major insights come only to the individuals who have the patience to develop an intimate understanding of a problem, who have the space and the freedom to take professional risks and explore apparently bizarre ideas...
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