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cmrqut.bsky.social

@cmrqut.bsky.social
53 followers 9 following 18 posts
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cmrqut.bsky.social @cmrqut.bsky.social · 20/08/2026
21 AUG — #ISME20 Day 5! 🦠 Today we're exploring antibiotic resistance, virus visualisation and a new reversible fixation method. Check out our presentations below! 🔬🌏
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cmrqut.bsky.social @cmrqut.bsky.social · 19/08/2026
20 AUG — #ISME20 Day 4! 🦠 Today we're exploring human microbiomes and their plasmids, microbial biogeography, methane cycling and high throughput isolation. Check out our presentations below! 🔬🌏
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cmrqut.bsky.social @cmrqut.bsky.social · 17/08/2026
18 AUG — #ISME20 Day 2! 🦠 Today we're exploring microbial functional roles, 16S and gene cluster tools, foodborne pathogens and rumen microbiomes rewiring. Check out our presentations below! 🔬🌏
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cmrqut.bsky.social @cmrqut.bsky.social · 16/08/2026
17 AUG — #ISME20 Day 1! 🦠 Today we're exploring AI (machine learning and LLMs), phage phylogeny, novel species recovery and the complex rumen microbiome. Check out our presentations below! 🔬🌏
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cmrqut.bsky.social @cmrqut.bsky.social · 14/08/2026
The Centre for Microbiome Research has a large contingent going to #ISME20 in Auckland next week. See below for our talks, posters and panels! 🌏🔬🦠 Discover new tools and methods to uncover microbial diversity, interactions and function, from individual cells and viruses to global microbiomes.
List of talk, poster and panel appearances for Centre for Microbiome Research staff and students at the International Symposium on Microbial Ecology 20.
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Sarah Bagby @scbagby.bsky.social · 29/06/2026
Out today in Nature Microbiology: a paper that started in 2021 with an email from @sullivan-lab.bsky.social. Subject line: "Crazy ideas". www.nature.com/articles/s41... 1/23
Screenshot of an email header with subject line "Crazy ideas"
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cmrqut.bsky.social @cmrqut.bsky.social · 21/04/2026
🎉 Big congratulations to Dr James Volmer and @luispedrocoelho ! James has been awarded a TRI LINC Grant, and Luis has received a TRI Translation Fellowship. Both are fantastic opportunities to translate their research into clinical applications and drive real-world impact.👏🚀
Dr James Volmer receiving his LINC grant awardAssociate Professor Luis Pedro Coelho receiving his TRI Translation Fellowship
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Ben J Woodcroft @benjwoodcroft.bsky.social · 23/03/2026
New paper in mSystems! 🧵 - how much of your metagenome is actually bacterial/archaeal DNA? For many samples, nobody knows. We built SingleM prokaryotic_fraction (SPF) to answer this, then ran it on >100,000 public metagenomes. 🧬🖥️🦠 Here's what we found 👇 doi.org/10.1128/msystems.01062-25
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cmrqut.bsky.social @cmrqut.bsky.social · 16/02/2026
First cake of the year! Thanks Pam!
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ISME - International Society for Microbial Ecology @isme-microbes.bsky.social · 20/01/2026
The ISME Early Career Scientist Committee is glad to begin the year by spotlighting @aroneys.bsky.social, a Postdoctoral Researcher at QUT, and his paper, “Bin Chicken: targeted metagenomic coassembly for the efficient recovery of novel genomes.” doi.org/10.1038/s415... (1/2)
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cmrqut.bsky.social @cmrqut.bsky.social · 23/11/2025
Celebrating Excellence at the Centre for Microbiome Research! We’re thrilled to share that Gene Tyson, @benjwoodcroft.bsky.social and @luispedrocoelho.bsky.social have once again been named Highly Cited Researchers for 2025 by Clarivate! #HighlyCited2025
bsky.app
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Samuel Aroney @aroneys.bsky.social · 13/11/2025
“Bin Chicken” is now published in Nature Methods! It substantially improves genome recovery through rational coassembly 🧬🖥️. Applied to public 🌍 metagenomes, we recovered 24,000 novel species 🦠, including 6 new phyla. doi.org/10.1038/s415... @benjwoodcroft.bsky.social @rhysnewell.bsky.social 🧵1/6
Logo of Bin Chicken (Australian white ibis) on a rubbish bin, pulling out a strand of DNA
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cmrqut.bsky.social @cmrqut.bsky.social · 04/08/2025
Spoiled today by two fantastic talks! Second by Prof Greg Cook about inhibiting greenhouse gas emissions in agricultural soils.
Prof Greg Cook presenting introductory slide
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cmrqut.bsky.social @cmrqut.bsky.social · 04/08/2025
Excited to hear from Prof Lindsay Hall at our combined CMR and @ace-uq.bsky.social meeting! Bifidobacterium is really important for setting up our gut in early life.
Prof Lindsay Hall presenting about early human development
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cmrqut.bsky.social @cmrqut.bsky.social · 17/07/2025
Check out our teams paper on SingleM, a metagenomic taxonomy profiler that doesn't ignore unknown species! @benjwoodcroft.bsky.social @aroneys.bsky.social doi.org/10.1038/s41587-025-02738-1
doi.org
Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper - Nature Biotechnology
Novel microbial species in metagenomes are identified using conserved regions within universal marker genes.
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cmrqut.bsky.social @cmrqut.bsky.social · 09/07/2025
Check out our team's latest paper, published in @ISMEJournal, introducing GenomeFISH—an innovative, genome-based FISH technique enabling strain-level visualisation of microbial communities @pam-engelberts.bsky.social doi.org/10.1093/isme...
doi.org
GenomeFISH: genome-based fluorescence in situ hybridisation for strain-level visualisation of microbial communities
Abstract. Fluorescence in situ hybridisation (FISH) is a powerful tool for visualising the spatial organisation of microbial communities. However, traditio
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Ben J Woodcroft @benjwoodcroft.bsky.social · 04/04/2025
We used Great Oxidation Event as a planet-sized "fossil" to add ancient dates to the Bacterial tree of life. @theconversation.com and @science.org articles show oxygen was used by non-cyanos before that cataclysm, surprisingly. theconversation.com/1-trillion-s... www.science.org/doi/10.1126/...
theconversation.com
1 trillion species, 3 billion years: how we used AI to trace the evolution of bacteria on Earth
Until now, it’s been very hard for scientists to establish a detailed timeline of the early evolution of bacteria.
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cmrqut.bsky.social @cmrqut.bsky.social · 21/03/2025
A fantastic talk from CMR's Prof Phil Pope (@microbesrule.bsky.social) at today’s QUT School of Biomedical Sciences seminar series. Phil shared how his team uses meta-omic technologies to interrogate the complex microbial communities that are integral to animal health, nutrition and gut function.
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cmrqut.bsky.social @cmrqut.bsky.social · 21/03/2025
New Postdoctoral Research Fellow opportunity at CMR! We are looking for a Gut Microbiome Specialist and Microbial Ecologist to join our team as we aim to unravel the complex mechanisms of methanogenesis in the cow rumen. Learn more and apply here: lnkd.in/gs83q68J
lnkd.in
QUT (Queensland University of Technology) hiring Postdoctoral Research Fellow - Gut Microbiome Specialist and Microbial Ecologist in Brisbane, Queensland, Australia | LinkedIn
Posted 8:34:26 AM. $79,813 to $108,300Fixed-term, full-timePrincess Alexandria HospitalReference number: 25123Term:…See this and similar jobs on LinkedIn.
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cmrqut.bsky.social @cmrqut.bsky.social · 20/03/2025
Don't miss the 2025 Science Festival Brisbane! CMR's Prof Gene Tyson will take part in a panel discussion at the session "Love Your Guts: Health and the Microbiome"—a fascinating exploration of how microbes in our gut shape our health. Find the full program below. worldsciencefestival.com.au
worldsciencefestival.com.au
World Science Festival Brisbane 2025
World Science Festival Brisbane (WSFB) celebrates its spectacular 10th anniversary in 2025 with the vision, Infinite Awe. There are over 200 ways to experience this epic 10 day festival, which brings ...
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cmrqut.bsky.social @cmrqut.bsky.social · 17/03/2025
Congrats to CMR's Camila Ayala Pintos on submitting her PhD thesis! It has been a pleasure to watch your hard work and dedication over the past few years, and we are so proud of everything you've accomplished. And, as always, thank you to Pam for an incredible cake 🎂🎉
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cmrqut.bsky.social @cmrqut.bsky.social · 18/02/2025
Congrats to CMR PhD student @iambrettb.bsky.social for taking home the best student speaker prize at this year's MGE Aus meeting 🥳 And another congrats to Ms Lara Carrington on securing the Australian Society for Microbiology Queensland Branch Mobile Genetic Elements Award. Excellent work both 👏👏
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cmrqut.bsky.social @cmrqut.bsky.social · 12/02/2025
The Centre for Microbiome Research (CMR) is now engaging with our community on Bluesky! We look forward to using this platform to have meaningful conversations and build stronger connections with researchers and community members around the world. CMR: Asking questions no one has asked 🦠🔬
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