iiinova — where your digital self keeps evolving

Christoph Elfmann

@c-elfmann.bsky.social

#IMPRS-GS PhD student in bioinformatics at the Jörg Stuelke lab of #UniGoettingen, currently working on #SubtiWiki's newest iteration

Posts Replies Media

Reposted by Christoph Elfmann

Jörg Stülke @joergstuelke.bsky.social · 17/05/2026

Read the new article of @c-elfmann.bsky.social on #SubtiWiki (sorry, in German)! link.springer.com/article/10.1...

link.springer.com

Von der Bioinformatik ins Labor und zurück: das neue SubtiWiki - BIOspektrum

BIOspektrum -

042

Reposted by Christoph Elfmann

Jörg Stülke @joergstuelke.bsky.social · 04/04/2026

I am happy to share that SubtInfluencer @c-elfmann.bsky.social has received the Ph.D. Award of the @vaam-microbes.bsky.social ! Congratulations, Christoph! @imprsgs.bsky.social @uni-goettingen.de #SubtiWiki

4112

Reposted by Christoph Elfmann

Jörg Stülke @joergstuelke.bsky.social · 08/12/2025

New in #SubtiWiki: Clusters of structural homologs! Enjoy the new feature! Thank you, Oskar Geissel & @c-elfmann.bsky.social @uni-goettingen.de @imprsgs.bsky.social

1126

Reposted by Christoph Elfmann

Jörg Stülke @joergstuelke.bsky.social · 25/10/2025

Yesterday, we had the graduation ceremony and PhD party of @c-elfmann.bsky.social . @uni-goettingen.de @imprsgs.bsky.social #SubtiWiki

041

Reposted by Christoph Elfmann

Jörg Stülke @joergstuelke.bsky.social · 17/10/2025

Today @c-elfmann.bsky.social , the mastermind of #SubtiWiki successfully defended his PhD thesis! The 50. PhD graduate from the group! Congratulations, Christoph! @uni-goettingen.de @imprsgs.bsky.social

4151

Reposted by Christoph Elfmann

Jörg Stülke @joergstuelke.bsky.social · 10/10/2025

Sneak preview of the next upcoming #SubtiWiki feature: All proteins are assigned to clusters sharing similar structures! Brought to you by Oskar Geissel and @c-elfmann.bsky.social . @imprsgs.bsky.social

162

Christoph Elfmann @c-elfmann.bsky.social · 03/07/2025

I'm presenting #ISMBECCB2025 in Liverpool, United Kingdom from July 20-24. Who else is going? Register here and don't miss it! invt.io/1bxb9bltizy

invt.io

I'm participating the ISMB/ECCB 2025 conference, join me!

010

Christoph Elfmann @c-elfmann.bsky.social · 05/05/2025

Some of our servers are currently having issues with their HTTPS certificates. Please use HTTP URLs like subtiwiki.uni-goettingen.de and pae-viewer.uni-goettingen.de as a workaround for now!

subtiwiki.uni-goettingen.de

SubtiWiki

000

Christoph Elfmann @c-elfmann.bsky.social · 04/02/2025

We now have a #BlueSky hashtag feed on SubtiWiki! Just add the hashtag #subtiwiki to your post and it will appear in the sidebar of gene / metabolite pages!

Screenshot of a gene page on SubtiWiki showcasing the new BlueSky feed in the sidebar.

031

Christoph Elfmann @c-elfmann.bsky.social · 31/01/2025

Finally fixed some issues with PTMs for the PAE Viewer! Instead of the per-atom PAE which #AlphaFold outputs for modified amino acids, the average per-residue PAE is now displayed. subtiwiki.uni-goettingen.de/v4/paeViewer...

subtiwiki.uni-goettingen.de

PAE Viewer

081

Christoph Elfmann @c-elfmann.bsky.social · 27/01/2025

Try out our integration of the amazing protein structure search tool #Foldseek on #SubtiWiki (subtiwiki.uni-goettingen.de/foldseek)! Just upload a structure or use PDB/AlphaFoldDB entries to find similar structures. #IMPRS-GS #UniGoettingen #alphafold #bacillus #subtilis

A screenshot of the results table of a Foldseek search on SubtiWiki. It shows multiple entries and corresponding metrics. One of the rows is expanded, revealing a 3D visualization of a superimposition of the target and the query structure corresponding to the search hit.

3218