Sign in

Bohan Zhao

@bohanzhao.bsky.social
6 followers 5 following 3 posts

@americanheart.bsky.social Postdoc Fellow and @bbrfoundation.bsky.social Young Investigator with Li Ye at @scripps.edu and @hhmi-science.bsky.social. Studying brain-body interaction in metabolic processes.

PostsRepliesMedia
Bohan Zhao @bohanzhao.bsky.social · 13/06/2026
Thanks. 1. DV (Z-axis) Reference Points: In my viewer, the DV axis is calibrated using Bregma as 0. The right viewer should use the dura DV 0. 2. AP Alignment: Looking at the two panels, the AP coordinates don't perfectly match (1.15 mm vs. 1.18 mm).
000
Bohan Zhao @bohanzhao.bsky.social · 27/05/2026
So I built a small tool that merges Allen CCFv3 with the traditional bregma-relative coordinate system (calibrated with Paxinos & Franklin's Atlas). Click any coronal or sagittal section, and get coordinates instantly. bohanzhao.com/Atlas Hope it saves someone a headache 🐭
bohanzhao.com
Mouse Brain Stereotaxic Coordinate Viewer
Free interactive tool: enter bregma-relative AP/ML/DV coordinates to navigate Allen Mouse Brain Atlas coronal and sagittal sections. Brain regions identified in real time.
1339
Bohan Zhao @bohanzhao.bsky.social · 31/08/2025
Hopefully one day I can say the same thing
030