Sign in

Armin Töpfer

@armintoepfer.com
757 followers 16 following 83 posts

Husband. Parent. Dr sc @ETH. Bioinformagician. Father of @PacBio HiFi. C++ Purist. Geek. Digital Artist. Electronic music. Speaks in memes. Opinions are my own!

PostsRepliesMedia
Armin Töpfer @armintoepfer.com · 19/10/2025
When a candidate's CV matches the job description too well
000
Armin Töpfer @armintoepfer.com · 18/10/2025
No updates from my side today
000
Armin Töpfer @armintoepfer.com · 22/07/2025
No updates from my side today.
000
Armin Töpfer @armintoepfer.com · 16/02/2025
I've been unhappy with my Sonos equipment. Last night, I've decided to take things into my own hands and created a local sonos controller in the browser with LLM help. Once I grok the full API, final frontier will be an Android app. Everything is 100% open source github.com/armintoepfer...
010
Armin Töpfer @armintoepfer.com · 30/01/2025
000
Armin Töpfer @armintoepfer.com · 16/01/2025
Back in town, this time staying a few nights in SF. Good to be back and looking forward to meeting y'all @pacbio.bsky.social
031
Armin Töpfer @armintoepfer.com · 03/01/2025
2025 mood
020
Armin Töpfer @armintoepfer.com · 03/12/2024
North German breakfast
010
Armin Töpfer @armintoepfer.com · 29/11/2024
Performance review time of the year
000
Armin Töpfer @armintoepfer.com · 24/11/2024
Tis the season, baking with the kids
010
Armin Töpfer @armintoepfer.com · 23/11/2024
What a banger of a disc print.
000
Armin Töpfer @armintoepfer.com · 23/11/2024
Tired of chasing streaming providers, I just got this gem, forever.
100
Armin Töpfer @armintoepfer.com · 22/11/2024
I made fried rice. Uncle Roger would approve.
000
Armin Töpfer @armintoepfer.com · 20/11/2024
So, #PacBio made the jump. Where are the UK folks? Where are our friends that can only read stories?
060
Armin Töpfer @armintoepfer.com · 20/11/2024
The upcoming SPRQ chemistry for #PacBio #Revio will be accompanied with a software update to improve the on-instrument 5mC methylation performance and introduce 6mA calling 🎉. Every HiFi read comes with both signals – for free. This will also enable Fiber-seq. Talk to your @pacbio.bsky.social rep!
PacBio jasmine methylation caller logo
080
Armin Töpfer @armintoepfer.com · 20/11/2024
I've recently created a background for a Christmas card using #midjourney. Feel free to use ;)
030
Armin Töpfer @armintoepfer.com · 18/11/2024
I just found my next Christmas work sweater
172
Armin Töpfer @armintoepfer.com · 17/11/2024
Easy.
140
Armin Töpfer @armintoepfer.com · 17/11/2024
What an amazing night. After 20 years last #qlimax ever. 9 hours of dancing, now back at home...time to sleep at 9:30am. I wore my swag from 2006, my first visit
140
Armin Töpfer @armintoepfer.com · 16/11/2024
This is it. Me and the boys are going to the last #qlimax. Just found my swag from 2006...will wear it with pride. Back in the days, #hardstyle wasn't that commercial yet. Let's hope for some great old-school sets and DJs.
010
Armin Töpfer @armintoepfer.com · 15/11/2024
Attention to detail and minimalism is a virtue that I fully support. I'm afraid to start writing in this beautiful notebook by ia.net/notebook. I would, but I didn't know what. Maybe "Scaling Genomics: My Last Decade from Fridges to Benchtops and Beyond" @pacbio.bsky.social
010
Armin Töpfer @armintoepfer.com · 15/11/2024
Getting ready for the next deep learning #ML project, beefed up my current 2x64c Genoa server with 1.5 TB RAM and 9 GPUs. One PCIe slot is broken...
130
Armin Töpfer @armintoepfer.com · 15/11/2024
Tomorrow, I'll visit #qlimax for the last time. Went there 2006 for the first time...time flies
040
Armin Töpfer @armintoepfer.com · 15/11/2024
Winter time means comfy clothes and fresh OJ
000
Armin Töpfer @armintoepfer.com · 15/11/2024
New T-shirts arrived for me and my Swiss buddy
010
Armin Töpfer @armintoepfer.com · 14/11/2024
We do all of this a few times and then we finally generate the final set of transcript consensus sequences. How fast is it? Running on 128 threads. S-reads vs wall-time vs RAM: 32M, 1h, 50GB 64M, 2h, 70GB 128M, 6h, 128GB 256M, 12h, 317GB 512M, 1d15h, 964GB
120
Armin Töpfer @armintoepfer.com · 14/11/2024
This approach also allows me to compute similarity between two sketches really fast. Much faster than just comparing minimizers. This is what I call coarse clustering, but I still need to avoid N^2 comparisons.
110
Armin Töpfer @armintoepfer.com · 13/11/2024
I've designed a new shirt that just shipped. Can't wait to wear this at work
120
Armin Töpfer @armintoepfer.com · 12/11/2024
Can't wait for the Mac Studio M4 Ultra. Running all those LLMs locally on 64GB is great, but I'm hitting its ceiling. Compiling x86 in a container makes the M1 sweat.
000