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Abby Dommer

@abbydommer.bsky.social
200 followers 353 following 9 posts

Postdoc in Molecular Dynamics Group at University of Groningen, NL | studying bioaerosols and airborne disease with computational chemistry

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Abby Dommer @abbydommer.bsky.social · 12/03/2026
E-protein news!
frontiersin.org
Frontiers | C-terminus-outward orientation of SARS-CoV-2 envelope proteins on viral capsid enables a novel virus–cell interaction pathway
Since the onset of COVID-19, emphasis has been largely placed on spike proteins, while other molecules of severe acute respiratory syndrome coronavirus 2 (SA...
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Reposted by Abby Dommer
Jan Stevens @janstevens.bsky.social · 13/02/2026
Our paper on [Bentopy](doi.org/10.1002/pro....) is out in Protein Science! We developed Bentopy to make assembling large-scale MD models more accessible, building on what we learned from trying to simulate whole-cell models. Here's our updated Martini JCVI-syn3A cell model👇
Cutaway and close-up views of a Martini coarse-grained whole-cell model of JCVI-syn3A, showing the densely packed cytoplasm with proteins, RNA, metabolites, and chromosome inside a lipid membrane with embedded membrane proteins
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Abby Dommer @abbydommer.bsky.social · 11/12/2025
My little outlook on how our lungs 🫁 are like the sea 🌊 is finally out in Central Science. Thanks to the support from incredible mentors @rommieamaro.bsky.social and @kprather.bsky.social !!
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Reposted by Abby Dommer
Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 10/02/2025
This is an amazing achievement - angstrom scale imagine of glycan molecules, what a great time for #glycotime. Congrats Leonhard Möckl! www.biorxiv.org/content/10.1...
biorxiv.org
Angstrom-resolution imaging of cell-surface glycans
Glycobiology is rooted in the study of monosaccharides, Angstrom-sized molecules that are the building blocks of intricate glycosylation patterns. Glycosylated biomolecules form the glycocalyx, a dens...
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