Zeqian Li @zeqianli.bsky.social · 09/09/2026Taking a mini sabbatical next month to work on open-source bioinformatics. Any folks in the bay area wanna connect? 000
Zeqian Li @zeqianli.bsky.social · 07/09/2026Best thing I've watched in a long time youtu.be/hpj6r6CjJf8?...youtu.beCasey Muratori – The Root of The Root of All Evil – BSC 2026YouTube video by Better Software Conference 000
Zeqian Li @zeqianli.bsky.social · 21/06/2026Now you can! tgv 0.3.0: - Browse multiple alignment/VCF/BED files - Experimental support for base modifications (MM/ML) - Bug fixes - Lots of internal work too to support upcoming features github.com/zeqianli/tgv 020
Reposted by Zeqian LiRagnar {Groot Koerkamp} @curiouscoding.nl · 04/06/2026Now that Sassy had been published and presented, it's time for it to break out of my bubble :) curiouscoding.nl/posts/sassy/ www.reddit.com/r/rust/comme... 197
Zeqian Li @zeqianli.bsky.social · 19/04/2026New tgv release! tgv now remembers your session by quitting with :wq. This release switches from rust-htslib to the native noodles library and reimplemented the S3 support through openDAL. The low-level API will enable finer optimization in the future. github.com/zeqianli/tgvgithub.comGitHub - zeqianli/tgv: Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion.Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion. - zeqianli/tgv 151
Reposted by Zeqian LiZeqian Li @zeqianli.bsky.social · 08/09/2025tgv 0.1.0 release: github.com/zeqianli/tgv - Rich CIGAR and base visualization - Allele frequency visualization - VCF and BED file support - Mouse dragging and hovering - Filter alignment Now 90% of what I need from IGV can be done in the terminal. Some interesting behind-the-scenes: 1117
Zeqian Li @zeqianli.bsky.social · 08/09/2025tgv 0.1.0 release: github.com/zeqianli/tgv - Rich CIGAR and base visualization - Allele frequency visualization - VCF and BED file support - Mouse dragging and hovering - Filter alignment Now 90% of what I need from IGV can be done in the terminal. Some interesting behind-the-scenes: 1117
Zeqian Li @zeqianli.bsky.social · 05/09/2025Come on Claude, I give you one more chance. This is just a simple refactoring. I wrote instructions in comments. I'll write a good prompt. I'll use your PRO model with MAX reasoning. You got it. No mistake. > Deletes all the code 030
Zeqian Li @zeqianli.bsky.social · 16/08/2025tgv is becoming so good. Next release gonna be epic. On a side note, I stopped using AI all together a month ago (except occasionally turning on tabbing for boilerplate). I'm so much happier. Coding is much more flowy and I'm learning a ton. Vim motion boosts productivity way more than any AI. 1153
Zeqian Li @zeqianli.bsky.social · 24/07/2025Anyone uses marimo notebooks regularly? What do you use it for? 000
Zeqian Li @zeqianli.bsky.social · 20/07/2025New tgv release: local cache! tgv download hg38 Download UCSC reference genomes to a local sqlite db for much faster browsing. Awesome Rust tools (twobit, bigtools) made this simple. github.com/zeqianli/tgvgithub.comGitHub - zeqianli/tgv: Explore 5,000+ genomes in the terminal. Light, blazing fast 🚀, vim-motion.Explore 5,000+ genomes in the terminal. Light, blazing fast 🚀, vim-motion. - zeqianli/tgv 0298
Zeqian Li @zeqianli.bsky.social · 28/05/2025I started tgv to learn Rust and building it has been unbelievably fun! If you wanna pick up a super fast and fun programming language, tgv is open for contribution! There aren't many bioinformatics tools built entirely by the community. If tgv can become one, I'll be so psyched 16720
