Reposted by Wing Yui NganSchulenburg Lab Kiel @schulenburglab.bsky.social · 27/03/2026See the new paper by Hanne Griem-Krey and @michaelhabig.bsky.social on hitchhiking on starships... fungi are weird! 022
Wing Yui Ngan @yuingan.bsky.social · 12/03/2026Tissues aren't static. They're evolving landscapes where mutant clones compete for dominance. Phylogenetics on somatic lineages, cross-species comparison across lifespans and steering clonal trajectories are exciting directions! @atjcagan.bsky.social's new comment www.nature.com/articles/s41...nature.comHow somatic evolution affects health - Nature Ecology & EvolutionAs somatic evolution becomes directly measurable, integrating eco-evolutionary principles with high-resolution molecular data creates opportunities to anticipate and prevent disease. 010
Wing Yui Ngan @yuingan.bsky.social · 06/03/2026 @lillycummins.bsky.social's new paper talking about complex gene-to-gene interactions are what actually drive bacteria evolution and drug resistance. www.nature.com/articles/s41...nature.comEpistasis and co-adaptation in bacterial genome evolution - Nature Reviews GeneticsBacterial genome evolution is shaped by epistasis, which can constrain or promote specific evolutionary paths. The authors review how integrating the effects of epistatic interactions into population-... 010
Wing Yui Ngan @yuingan.bsky.social · 12/02/2026@bramvandijk.bsky.social (and many other)'s new paper covered insights in microbial ecology, evolution and theoretical biology. 073
Reposted by Wing Yui NganLaurie Belcher @lauriebelch.bsky.social · 16/07/2025OrthoFinder just dropped a major update It’s faster, more accurate, and ready for thousands of genomes Let’s break it down (1/10) github.com/OrthoFinder/... www.biorxiv.org/content/10.1... 112673
Wing Yui Ngan @yuingan.bsky.social · 14/07/2025Enjoyed the @phar.cam.ac.uk department final year talk last Friday. @psalmotoxin.bsky.social Smith Team delivered 5 talks from IBD & pain (Luke), joint pain (Helen and Monica), ageing (Cherry) to gut barrier functions (Anne). Wow 👏👏👏. 031
Reposted by Wing Yui NganSegata Lab @cibiocm.bsky.social · 11/06/2025The new version of MetaPhlAn v4.2.2 released! 📌taxonomic profiling of long-read metagenomes for the first time 📌new version of the MetaPhlAn db (vJan25_202503) containing >21k new SGBs Try it out & @hutlab.bsky.social and we are looking forward to your feedback! forum.biobakery.org/t/metaphlan-...forum.biobakery.orgMetaPhlAn 4.2.2 release (initial long-read sequencing support and database update)Announcement We are pleased to share that MetaPhlAn 4.2.2 is now available, which incorporates taxonomic profiling of long-read metagenomes for the first time and includes a new version of the MetaPhl... 25525
Wing Yui Ngan @yuingan.bsky.social · 08/06/2025Excited to have started my postdoc with @psalmotoxin.bsky.social, working on mole rat research! Got a really warm welcome from the team 😄🙌 Wrapped up the first week with some lab punting on Friday—strong start! (Mole rats weren't invited but we had a blast anyway 🛶) 030
Wing Yui Ngan @yuingan.bsky.social · 07/12/2024Summary: Lavisha found an IS inserted next to a deletion, and I found an IS inserted between two duplication fragments. Interestingly, both have no target site duplications identified. It suggested 1) IS element inserted in the DNA break, or 2) the Del or Dup was mediated by the IS transposase. 021
Wing Yui Ngan @yuingan.bsky.social · 12/02/2024Delighted to contribute to this project and grateful that part of my PhD work builds upon the findings in this paper. As I near the completion of my PhD journey, stay tuned for the updates and sharing of my research. 🙌 050