iiinova — where your digital self keeps evolving

Reposted by Victor Paton

EMBL PhD Symposium @phdsymposium.bsky.social · 28/11/2025

Thank you to all the speakers, participants, supporters, and organizers who made the 27th EMBL PhD Symposium a success! Our theme, “Shaping Tomorrow,” inspired bold thinking on innovation, ethics, and society. Excited to see you all at the 28th EMBL PhD Symposium next year!

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Reposted by Victor Paton

EMBL @embl.org · 15/09/2025

Fumio Nakaki, from the Sharpe Group at EMBL Barcelona, has quantified the risk of stealth multiplets in multiplexed conditions, highlighting when and how these artefacts can still sneak into your data. www.embl.org/news/science...

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Reposted by Victor Paton

EMBL @embl.org · 01/09/2025

📢 Recruitment for the EMBL International PhD Programme is officially open! At EMBL, we train young scientists to become skilled and creative future leaders in academia and other sectors. Join us and get a head start on your career in life sciences! bit.ly/47mmiFF

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Reposted by Victor Paton

EMBL @embl.org · 10/03/2025

Find out how video games helped scientists visualise limb development. Laura Aviñó-Esteban, PhD student at EMBL Barcelona and first author of a recently published study, explains how video games helped her solve the problem of fragmented limb dev. visualisation. 💻🧪 www.embl.org/news/science...

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Reposted by Victor Paton

EMBL Events @events.embl.org · 14/03/2025

🚨 Deadline extension alert 🚨 You have until 21 March to apply for #EMBOMulticellModelling ➡️ s.embl.org/mmc25-01-bl Join us as we explore the dynamics of multicellular systems, covering both the molecular and the mechanical sides in 2D and 3D. 🗓️ 14 – 20 June 2025 📍 EMBL Barcelona

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Reposted by Victor Paton

James Sharpe @jamesasharpe.bsky.social · 24/02/2025

Congratulations Laura Avinyo! @lauavinyo.bsky.social and Heura Cardona! First paper of your PhD 🎉. doi.org/10.1242/dev.... Beautiful quantified trajectory of how the skeletal pattern of the gene Sox9 emerges during limb development. @embl.org @barcelonacollaboratorium.com

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Reposted by Victor Paton

Saez-Rodriguez Group @saezlab.bsky.social · 20/02/2025

The first version of NetworkCommons is now published in Bioinformatics. Next, we’ll focus on involving more of the network biology community. academic.oup.com/bioinformati... In parallel, we’ll continue expanding benchmarks and developing new applications. Interested in contributing? Reach out! ⬇️

academic.oup.com

NetworkCommons: bridging data, knowledge and methods to build and evaluate context-specific biological networks

AbstractSummary. We present NetworkCommons, a platform for integrating prior knowledge, omics data, and network inference methods, facilitating their usage

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Victor Paton @vicpaton.bsky.social · 20/02/2025

Hot of the press!! Whether you feel your data can benefit from network biology, you’re a method developer, or you have some strategies to evaluate networks, check this out! NetworkCommons is actively looking for contributions :)

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Reposted by Victor Paton

Martin Garrido-Rodriguez @martingarridorc.bsky.social · 10/02/2025

Excited to share our new paper! If you’re interested in glycoproteomics, be sure to check it out 👇 Huge kudos to all coauthors, especially the amazing glycoteam: Clement, @miraburtscher.bsky.social, Isabelle, and Misha (@savitski-lab.bsky.social)!

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Reposted by Victor Paton

EMBL @embl.org · 27/01/2025

Recruitment for the EMBL International PhD Programme is officially open! 🔊 At EMBL, we train young scientists to become skilled and creative future leaders in academia, industry & other sectors. Start your career in the life sciences with us! www.embl.org/about/info/e... 🧪 #AcademicSky #careers

EMBL International PhD Programme Summer Recruitment Applications open. Applications close 10 March 2025.

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Reposted by Victor Paton

Aafke Gros @aafkegros.bsky.social · 15/01/2025

Microscopy Nodes is now up on bioRxiv! 🚀 This is a Blender extension that seamlessly integrates and visualizes 3D microscopy data (TIF & @zarr.dev). High-quality volume rendering for anyone, in both EM and fluorescence, regardless of computational expertise! 🔬 www.biorxiv.org/content/10.1...

FIB-SEM dataset visualized with Microscopy Nodes, data from Mocaer et al 2023

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Reposted by Victor Paton

EMBL Events @events.embl.org · 09/01/2025

✨#EMBOMulticellModelling is open for registration! This course was designed for experimental biologists to learn the fundamentals of multicellular modelling and gain experience with computational techniques. Apply by 8 March ➡️ s.embl.org/mmc25-01-bl 🗓️ 14 – 20 June 2025 📍 EMBL Barcelona

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Reposted by Victor Paton

Annique Claringbould @anniquec.bsky.social · 09/01/2025

Come do a PhD with me! 🖥️🧬 We've got very exciting multiomics data coming in, you get to shape the project and there are lots of opportunities to collaborate and learn. Reach out here or via email if you have questions Please reskeet 🙏 www.werkenbijerasmusmc.nl/en/vacancy/1...

werkenbijerasmusmc.nl

Vacature: PhD candidate in gene regulatory mechanisms underpinning cardiovascular diseases

We are seeking a motivated PhD student to join our lab at Erasmus University Medical Centre in Rotterdam, exploring the gene regulatory mechanisms underpinning cardiovascular diseases. Type 2 diabetes...

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Reposted by Victor Paton

Saez-Rodriguez Group @saezlab.bsky.social · 23/12/2024

We present Gene Regulatory nETwork Analsyis (GRETA), a framework to infer, compare and evaluate gene regulatory networks #GRNs. With it, we have benchmarked multimodal and unimodal GRN inference methods. Check the results here 👇 Paper: doi.org/10.1101/2024.12.20.629764 Code: github.com/saezlab/greta

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Victor Paton @vicpaton.bsky.social · 26/11/2024

NetworkCommons is out! It's been a lot of fun to work on this project, please consider contributing to this exciting initiative to democratise network biology 🪐 Thanks a lot to all coauthors especially Denes, @martingarridorc.bsky.social and @juliosaezrod.bsky.social

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