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vagkaratzas.bsky.social

@vagkaratzas.bsky.social
20 followers 16 following 0 posts

Bioinformatician | Software Engineer | Research Fellow at EMBL-EBI

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Reposted by @vagkaratzas.bsky.social
nf-core @nf-co.re · 28/01/2026
🧑‍💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing? Please join the 🌍🌎 Eur/M.E./Afr/Americas weekly helpdesk. Please join our nf-core maintainer Evangelos Karatzas, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
play.workadventu.re
WorkAdventure
Organize your online event in WorkAdventure to recreate spontaneous social interactions. Connect, collaborate and have fun with your teammates and attendees.
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Reposted by @vagkaratzas.bsky.social
nf-core @nf-co.re · 25/11/2025
🧑‍💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing? We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk. Please join our host @vagkaratzas.bsky.social, nf-core maintainer, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
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Reposted by @vagkaratzas.bsky.social
nf-core @nf-co.re · 06/11/2025
Pipeline release! nf-core/proteinfamilies v2.0.0 - Tin Shark! Please see the changelog: github.com/nf-core/prot...
github.com
Release Tin Shark · nf-core/proteinfamilies
Added #124 Added new subworkflow MERGE_FAMILIES that can optionally merge similar (but not redundant) generated protein families. (by @vagkaratzas) Added new functionality to the local module IDE...
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Reposted by @vagkaratzas.bsky.social
mgnifydb.bsky.social @mgnifydb.bsky.social · 17/07/2025
The genome catalogue for the soil microbiome is now live on MGnify! Built from MAGs & isolate genomes across 21 studies (including the recently published SMAG and Microflora Danica catalogues), it features 19,472 species.
ebi.ac.uk
MGnify - EBI
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mgnifydb.bsky.social @mgnifydb.bsky.social · 27/06/2025
It’s #WorldMicrobiomeDay! This year’s theme is Microbiome 101: What You Need to Know — here we present MGnify’s guide to microbiome data! 🔬
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Reposted by @vagkaratzas.bsky.social
nf-core @nf-co.re · 05/02/2025
Pipeline release! nf-core/proteinfamilies v1.0.0 - Iron Rhinoceros! Please see the changelog: github.com/nf-core/proteinfamilies/…
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