iiinova — where your digital self keeps evolving

Reposted by Ian Simpson

Caroline Wright @carolinefwright.bsky.social · 02/12/2025

New machine learning method for automated extraction of gene-disease relationships from the literature using @gene2phenotype.bsky.social - should make future curation much faster, easier and more comprehensive, see preprint: www.medrxiv.org/content/10.1...

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Reposted by Ian Simpson

medRxivpreprint @medrxivpreprint.bsky.social · 25/11/2025

Domain-wide Mapping of Peer-reviewed Literature for Genetic Developmental Disorders using Machine Learning and Gene2Phenotype www.medrxiv.org/content/10.1101/202…

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Reposted by Ian Simpson

Simons Initiative for the Developing Brain (SIDB) @sidb-edinburgh.bsky.social · 17/12/2024

SIDB are partnering with the School of Informatics, University of Edinburgh to offer studentships that will use AI methods to improve our understanding of autism & neurodevelopmental conditions. Find a project that interests you: www.ai4biomed.io/research/pro...

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Reposted by Ian Simpson

Simons Initiative for the Developing Brain (SIDB) @sidb-edinburgh.bsky.social · 28/11/2024

We have fully-funded PhD opportunities combining AI & Autism Research! Find out more & apply by 20th Jan >> www.ai4biomed.io/research/pro... @tisimpson.bsky.social #healthinformatics #biomedicalengineering #biomedicalimaging #genomicmedicine #ExtraordinaryEdinburgh

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Ian Simpson @tisimpson.bsky.social · 21/11/2024

This is a great piece of research on the state of scientific publishing and I’d say essential reading. It’s not sustainable and it’s incredibly damaging to our reputation as a community. Many thanks to the authors for shining a light on this issue and backing it up with quantitative evidence.

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Ian Simpson @tisimpson.bsky.social · 20/11/2024

Absolutely delighted to be partnering with SIDB; combining AI and Autism Research to improve our understanding of ASDs. We have a very exciting collection of PhD projects open for applications - www.ai4biomed.io/research/pro... closing 8th January.

ai4biomed.io

Projects for 2025 entry – UKRI AI CDT in Biomedical Innovation

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Reposted by Ian Simpson

Simons Initiative for the Developing Brain (SIDB) @sidb-edinburgh.bsky.social · 20/11/2024

SIDB has partnered with The UKRI AI CDT in Biomedical Innovation. Our PhD studentships have a strong translational focus and seek to develop & apply AI approaches to biomedical domains. Find out more & apply by 20th Jan >> www.ai4biomed.io/research/pro... @tisimpson.bsky.social

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Ian Simpson @tisimpson.bsky.social · 12/02/2024

📢 Latest MOGDx pre-print, this time for Parkinson’s Disease. Ryan B, Marioni RE, Simpson TI. An Integrative Network Approach for Longitudinal Stratification in Parkinson’s Disease. medRxiv 2024 - doi.org/10.1101/2024.0… Congratulations Barry Ryan @BioMedAI_CDT

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Ian Simpson @tisimpson.bsky.social · 12/02/2024

Very much looking forward to be hosting our first tutorial at #ISMB24 iscb.org/ismb2024/ this summer in Montreal with @BioMedAI_CDT students Barry Ryan, Sebestyén Kamp. “Modelling Multi-Modal Biomedical Data Using Networks “ - iscb.org/ismb2024/progr…

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Reposted by Ian Simpson

Jonathan Pritchard @jkpritch.bsky.social · 01/10/2023

I'm delighted to release the first half of my new textbook in human genetics: web.stanford.edu/group/pritch... "An Owner's Guide to the Human Genome: an introduction to human population genetics, variation and disease"

web.stanford.edu

An Owner's Guide to the Human Genome

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Ian Simpson @tisimpson.bsky.social · 14/01/2024

Our latest preprint ➡️ Omics network integration and GNNs for patient class prediction. Multi-Omic Graph Diagnosis (MOGDx) : A data integration tool to perform classification tasks for heterogeneous diseases - www.medrxiv.org/content/10.1... #gnn #networks #dataintegration #omics

medrxiv.org

Multi-Omic Graph Diagnosis (MOGDx) : A data integration tool to perform classification tasks for het...

medRxiv - The Preprint Server for Health Sciences

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