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thijsstuyver.bsky.social

@thijsstuyver.bsky.social
49 followers 31 following 23 posts
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Reposted by @thijsstuyver.bsky.social
Jorge Bravo Abad @bravo-abad.bsky.social · 29/09/2025
Predictive chemistry often struggles with scarce data. Surrogate models can help, but should we use their predicted QM descriptors or hidden embeddings? Chen & Stuyver show that hidden spaces usually win—faster, more robust, and data-efficient. pubs.rsc.org/en/content/a...
pubs.rsc.org
Harnessing surrogate models for data-efficient predictive chemistry: descriptors vs. learned hidden representations
Predictive chemistry often faces data scarcity, limiting the performance of machine learning (ML) models. This is particularly the case for specialized tasks such as reaction rate or selectivity predi...
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 12/09/2025
New paper from our group out in JCTC! We introduce CYCLO70 — a benchmarking set of 70 challenging cycloaddition reactions (Diels–Alder, dipolar, sigmatropic). 👉 doi.org/10.1021/acs.... (1/6)
doi.org
CYCLO70: A New Challenging Pericyclic Benchmarking Set for Kinetics and Thermochemistry Evaluation
Here, a new challenging benchmarking data set for cycloaddition reactions, CYCLO70, is presented and analyzed. CYCLO70 has been generated with the specific aim of being representative of the most chal...
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 13/06/2025
Harnessing Surrogate Models for Data-efficient Predictive Chemistry: Descriptors vs. Learned Hidden Representations | ChemRxiv - doi.org/10.26434/che...
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 11/06/2025
New preprint -- CYCLO70: A New Challenging Pericyclic Benchmarking Set for Kinetics and Thermochemistry Evaluation t.co/O6309jKaJq (1/5)
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 19/05/2025
New preprint from our group: Screening Diels-Alder reaction space to identify candidate reactions for self-healing polymer applications (1/5) chemrxiv.org/engage/chemr...
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Reposted by @thijsstuyver.bsky.social
ChemRxiv Bot @chemrxivbot.bsky.social · 12/02/2025
What can be learned from the electrostatic environments within nitrogenase enzymes? Authors: Thijs Stuyver, Olena Protsenko, Davide Avagliano, Thomas Ward DOI: 10.26434/chemrxiv-2025-dndx6
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 10/02/2025
Happy to see this nice collaboration with @moranlabchem.bsky.social out in @ChemistryEur -- Abiotic Ribonucleoside Formation in Aqueous Microdroplets: Mechanistic Exploration, Acidity, and Electric Field Effects. @javialra97.bsky.social chemistry-europe.onlinelibrary.wiley.com/doi/full/10....
chemistry-europe.onlinelibrary.wiley.com
Abiotic Ribonucleoside Formation in Aqueous Microdroplets: Mechanistic Exploration, Acidity, and Electric Field Effects
A computational investigation of the reported abiotic phosphorylation of ribose and the subsequent formation of ribonucleosides reveals that the most plausible reaction mechanism involves the protona...
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 10/02/2025
Now out in JCTC: Improving the Reliability of, and Confidence in, DFT Functional Benchmarking through Active Learning @javialra97.bsky.social pubs.acs.org/doi/full/10....
pubs.acs.org
Improving the Reliability of, and Confidence in, DFT Functional Benchmarking through Active Learning
Validating the performance of exchange-correlation functionals is vital to ensure the reliability of density functional theory (DFT) calculations. Typically, these validations involve benchmarking dat...
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 31/01/2025
One more week to apply!
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thijsstuyver.bsky.social @thijsstuyver.bsky.social · 08/01/2025
We’re reopening applications! A 5-year position as Data Steward/Research Engineer for the chemistry departments of @psl-univ.bsky.social is available. 💼 New deadline: February 7th. 📄 More info & application details below. 🔁 Reposts appreciated! 🙌
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Reposted by @thijsstuyver.bsky.social
Javier E. Alfonso-Ramos @javialra97.bsky.social · 13/12/2024
What better first post than to share our last two preprints! 🚀 In one, we study how electric fields modulate chemical reactivity, and in the second, we explore a data-efficient strategy for the assembly of more representative benchmarking datasets for DFT validation. @thijsstuyver.bsky.social
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Reposted by @thijsstuyver.bsky.social
ChemRxiv Bot @chemrxivbot.bsky.social · 05/12/2024
Abiotic ribonucleoside formation in aqueous microdroplets: mechanistic exploration, acidity, and electric field effects Authors: Maciej Piejko, Javier Emilio Alfonso Ramos, Joseph Moran, Thijs Stuyver DOI: 10.26434/chemrxiv-2024-m39s3
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Reposted by @thijsstuyver.bsky.social
ChemRxiv Bot @chemrxivbot.bsky.social · 12/12/2024
Improving the reliability of, and confidence in, DFT functional benchmarking through active learning Authors: Javier E. Alfonso-Ramos, Carlo Adamo, Éric Brémond, Thijs Stuyver DOI: 10.26434/chemrxiv-2024-98nc1
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