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Renato D. Cunha

@renatodcunha.bsky.social
34 followers 47 following 4 posts

Ph.D. in Drug Discovery - Computational Chemistry Principal Investigator at the CMOBio Lab Federal University of ABC Molecular Dynamics | QM/MM | Quantum Mechanics | Biomolecules | Photophysics | Machine Learning #compchem #stem #researcher #qmmm

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Renato D. Cunha @renatodcunha.bsky.social · 08/04/2026
I am very happy to share that I am back at the Federal University of ABC, Brazil, to start my research group, the Computational Multiscale Modelling of Organic and Biomolecules laboratory (CMOBio Lab). Now you can contact me in renato.cunha@ufabc.edu.br #compchem #newpi #researcher
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Renato D. Cunha @renatodcunha.bsky.social · 06/02/2025
I am launching my GitHub website to share with the #compchem community some codes related to the field. You can find some tools in Python, C-Bash, awk, Plots, and shortly my presentations in PDF. github.com/rdiascunha/c...
github.com
GitHub - rdiascunha/cmoblab: Computational Multiscale of Organic and Biomolecules Laboratory
Computational Multiscale of Organic and Biomolecules Laboratory - rdiascunha/cmoblab
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Reposted by Renato D. Cunha
Justin Lemkul @justinlemkulvt.bsky.social · 21/01/2025
We have a new #tutorial posted online, this time for Gaussian-accelerated MD as implemented in NAMD. Article has been submitted to LiveCoMS, a great venue for such efforts. We welcome feedback! Yes, it's alanine dipeptide, but you have to start somewhere :) #compchem github.com/Lemkul-Lab/g...
github.com
GitHub - Lemkul-Lab/gamd_livecoms_tutorial
Contribute to Lemkul-Lab/gamd_livecoms_tutorial development by creating an account on GitHub.
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Renato D. Cunha @renatodcunha.bsky.social · 11/01/2025
Enhorabuena! The first paper of 2025! We report the parametrization of the MST model for the prediction of hydration free energies based on ddCOSMO strategy. We also introduce several novelties in MST for both ddCOSMO and IEFPCM. onlinelibrary.wiley.com/doi/10.1002/... #compchem
onlinelibrary.wiley.com
Extending the MST Model to Large Biomolecular Systems: Parametrization of the ddCOSMO‐MST Continuum Solvation Model
We report the extension of the Miertus–Scrocco–Tomasi continuum model for the prediction of hydration free energies of molecules based on the domain decomposition formulation of COSMO, which allows a...
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