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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 02/10/2026

Richard Zhu, Darren Xu, Lee-Shin Chu, Jeffrey J. Gray: Improving scoring functions for protein-protein docking with LambdaLoss arxiv.org/abs/2610.00191 arxiv.org/pdf/2610.00191 arxiv.org/html/2610.00191

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 02/10/2026

[2026-10-02 Fri (UTC), 1 new article found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 01/10/2026

Jason Scheffel, Saurabh Sihag: Covariance Eigenspace Provides Latent Attribution of Longitudinal Effects in Brain Age Gap arxiv.org/abs/2609.40202 arxiv.org/pdf/2609.40202 arxiv.org/html/2609.40202

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 01/10/2026

[2026-10-01 Thu (UTC), 1 new article found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 30/09/2026

Luyao Zhao, et al.: Gel-Confined Rolling-Circle Amplification Enables Sensitive Single-Cell Proteoform Analysis arxiv.org/abs/2609.36251 arxiv.org/pdf/2609.36251 arxiv.org/html/2609.36251

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 30/09/2026

[2026-09-30 Wed (UTC), 1 new article found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 29/09/2026

Zixi Yi, Limeng Qu, Gary P. T. Choi: An integrated geometric quantification and shape analysis framework for axillary lymph node metastasis in breast cancer patients arxiv.org/abs/2609.35437 arxiv.org/pdf/2609.35437 arxiv.org/html/2609.35437

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 29/09/2026

Camilla Ferrario, Maelys Venet, Olivier Villemain, Maxime Sermesant: Uncertainty Quantification in Cardiac Model Personalisation from Ultrafast Ultrasound arxiv.org/abs/2609.35214 arxiv.org/pdf/2609.35214 arxiv.org/html/2609.35214

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 29/09/2026

Edilbert Christhuraj, Claudio Iuliano, Alexander Lange: Structured Population Models for Follicular Development arxiv.org/abs/2609.32578 arxiv.org/pdf/2609.32578 arxiv.org/html/2609.32578

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 29/09/2026

[2026-09-29 Tue (UTC), 3 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 28/09/2026

Sartori, Rollo, Caranzano, Sanavia, Fariselli, Pancotti: Predicting Mutational Signature Exposures from H&E Whole Slide Images: A Pan-Cancer Feasibility Study arxiv.org/abs/2609.30985 arxiv.org/pdf/2609.30985 arxiv.org/html/2609.30985

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 28/09/2026

[2026-09-28 Mon (UTC), 2 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 25/09/2026

Aubrey Ayres, Mitchel J. Colebank: Parameter identifiability of a neuroendocrine-inflammatory model across experimental designs arxiv.org/abs/2609.30031 arxiv.org/pdf/2609.30031 arxiv.org/html/2609.30031

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 25/09/2026

Zhenyu Ma, Xukai Jiang: PRAXIS-VirtualCell: A Programmable and Trustworthy Framework for Agentic Virtual Cell Experiments arxiv.org/abs/2609.29221 arxiv.org/pdf/2609.29221 arxiv.org/html/2609.29221

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 25/09/2026

Narayanan Raghupathy: ProteoEM: probabilistic protein abundance estimation from iterative affinity traces arxiv.org/abs/2609.29155 arxiv.org/pdf/2609.29155 arxiv.org/html/2609.29155

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 25/09/2026

[2026-09-25 Fri (UTC), 3 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 24/09/2026

Saghafi, Neylan, Li, McLean, Clifford: Circadian Derived Features for Early Discrimination Across Insomnia Severity Levels: At Least 8 Weeks of Monitoring Are Needed for Clinically Meaningful... arxiv.org/abs/2609.28252 arxiv.org/pdf/2609.28252 arxiv.org/html/2609.28252

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 24/09/2026

Tatsuaki Tsuruyama: Spatial-Molecular Information Analysis Based on Histopathological Geometry: KL-Divergence Decomposition of Cell Distribution and Location-Dependent Expression States in PD... arxiv.org/abs/2609.27755 arxiv.org/pdf/2609.27755 arxiv.org/html/2609.27755

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 24/09/2026

Haochen Yang, Byung Ho Lee, Anne Grapin-Botton, Heather A. Harrington, Helen M. Byrne: Topological Inference for Organoids arxiv.org/abs/2609.27668 arxiv.org/pdf/2609.27668 arxiv.org/html/2609.27668

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 24/09/2026

Jeffrey M. Dick: BreCol: Benchmarking Classical and Deep-Learning Methods for Microbiome-Based Cancer Detection arxiv.org/abs/2609.27207 arxiv.org/pdf/2609.27207 arxiv.org/html/2609.27207

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 24/09/2026

[2026-09-24 Thu (UTC), 4 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 23/09/2026

Baode Gao, et al.: Uncertainty Quantification-Incorporated Ensemble Model for Personalized Prediction of Severe Radiotherapy-Induced Immunosuppression Among Esophageal Cancer Patients arxiv.org/abs/2609.25139 arxiv.org/pdf/2609.25139 arxiv.org/html/2609.25139

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 23/09/2026

Saghir Alfasly, et al.: WILSON - a pathology foundation model framework for patient-level analysis and diagnostic text generation arxiv.org/abs/2609.25123 arxiv.org/pdf/2609.25123 arxiv.org/html/2609.25123

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 23/09/2026

Pascal Brault, Matthieu Wolf, Yana Gouzi, Claire Albasi, Jeanne Trognon: Reactive molecular dynamics simulations of atenolol first steps degradation by 9CL6 ammonia monooxygenase arxiv.org/abs/2609.25076 arxiv.org/pdf/2609.25076 arxiv.org/html/2609.25076

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 23/09/2026

Sangam Kumar Jena, Pandarasamy Arjunan: BananaVLM: A Domain-Adapted Vision Language Model for Banana Crop Disease Diagnosis arxiv.org/abs/2609.25040 arxiv.org/pdf/2609.25040 arxiv.org/html/2609.25040

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 23/09/2026

[2026-09-23 Wed (UTC), 4 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 22/09/2026

Johannes Schl\"uter, Alexander Sch\"onhuth: Retracing the Process of Translation: Proteome-wide mapping of stable transcriptomic predictors of protein abundance in cancer cell lines arxiv.org/abs/2609.24004 arxiv.org/pdf/2609.24004 arxiv.org/html/2609.24004

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 22/09/2026

Laura Cif, et al.: Foundation-model-based multi-label phenotyping of combined hyperkinetic movement disorders arxiv.org/abs/2609.22369 arxiv.org/pdf/2609.22369 arxiv.org/html/2609.22369

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 22/09/2026

[2026-09-22 Tue (UTC), 2 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 21/09/2026

Ye Ma, Dongwei Liu, Meijin Hou, Chenyi Guo: High Reconstruction Quality and Restart Repeatability Do Not Guarantee Recovery of Ground-Truth Muscle Synergies arxiv.org/abs/2609.21394 arxiv.org/pdf/2609.21394 arxiv.org/html/2609.21394

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 21/09/2026

[2026-09-21 Mon (UTC), 1 new article found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 18/09/2026

[2026-09-18 Fri (UTC), no new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 17/09/2026

Uros Sutulovic, Daniele Proverbio, Rami Katz, Giulia Giordano: Automatic denoising and differentiation based on Savitzky-Golay filtering and Homogeneous Differentiators for attractor reconstr... arxiv.org/abs/2609.18631 arxiv.org/pdf/2609.18631 arxiv.org/html/2609.18631

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 17/09/2026

Naqib Sad Pathan, Mohammad Shifat-E-Rabbi, Kristofor E. Pas, Ivan Medri, Bartek Rajwa, Gustavo K. Rohde: FlowLOT: Linearized Optimal Transport for Flow Cytometry Analysis arxiv.org/abs/2609.17906 arxiv.org/pdf/2609.17906 arxiv.org/html/2609.17906

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 17/09/2026

Mehradfar, Sepehri, Antholine, Shankar, Kwon, Avestimehr, Rasoulianboroujeni: Decoding Extrahepatic Targeting of Lipid Nanoparticles with Interpretable Machine Learning arxiv.org/abs/2609.17721 arxiv.org/pdf/2609.17721 arxiv.org/html/2609.17721

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 17/09/2026

[2026-09-17 Thu (UTC), 4 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 16/09/2026

Shuo Zhang, Huifeng Zhang, Rongqi Hong, Jian K. Liu: GPCR Ligand Bioactivity Prediction with Physics-Informed Dual-State Query Learning arxiv.org/abs/2609.16468 arxiv.org/pdf/2609.16468 arxiv.org/html/2609.16468

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 16/09/2026

Alessandro Leronni, Rosalia Moreddu: Optical microelectrode arrays for differential readout of electrical and mechanical signals in cardiac cells arxiv.org/abs/2609.16101 arxiv.org/pdf/2609.16101 arxiv.org/html/2609.16101

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 16/09/2026

[2026-09-16 Wed (UTC), 2 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 15/09/2026

Wang, Konstantinopoulos, Kuo, Cai, Wei, Pienaar, Hao: Multiscale modeling of host-pathogen interactions and mucociliary clearance during non-tuberculous mycobacterial pulmonary infection arxiv.org/abs/2609.15584 arxiv.org/pdf/2609.15584 arxiv.org/html/2609.15584

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 15/09/2026

Jiqing Huang, et al.: TractSpLearn: Specialized Shared-Manifold Learning for Individualized Detection of Subtle White Matter Alterations in Mild Traumatic Brain Injury arxiv.org/abs/2609.15342 arxiv.org/pdf/2609.15342 arxiv.org/html/2609.15342

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 15/09/2026

Manuel Eduardo Hern\'andez-Garc\'ia, Monica S. L\'opez-Casta\~nos: Telegraph Processes with Extrinsic Fluctuations: Burst Dynamics and an Application to Domestic Cat Activity arxiv.org/abs/2609.15010 arxiv.org/pdf/2609.15010 arxiv.org/html/2609.15010

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 15/09/2026

Mehdi Yazdani-Jahromi, Sanjay Padhi, Ivan Garibay: MIRAGE: Measuring Interpolation and Redundancy in Affinity GEneralization arxiv.org/abs/2609.14491 arxiv.org/pdf/2609.14491 arxiv.org/html/2609.14491

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 15/09/2026

Min Gao, Yukun Guo, Tristan T. Hormel, Jinyi Hao, Azaz Khan, Steven T. Bailey, Thomas S. Hwang, Yali Jia: Automated Volumetric Segmentation of Microaneurysms on OCT Using Artificial Intelligence arxiv.org/abs/2609.13508 arxiv.org/pdf/2609.13508 arxiv.org/html/2609.13508

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 15/09/2026

[2026-09-15 Tue (UTC), 5 new articles found for q-bioQM Quantitative Methods]

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 14/09/2026

Alanis, Alizadeh, Rothermel, Shariatpanahi, Kheirkhah, Hofmann, Hahn, Jamalabadi: Perturbational Validity for Foundation Models of Brain Dynamics: A Controlled Proof-of-Principle Simulation arxiv.org/abs/2609.12710 arxiv.org/pdf/2609.12710 arxiv.org/html/2609.12710

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 14/09/2026

Berkenbaum, Glotin, Sarano, Zimmer, Sarano, Adam, Giraudet: Audiovisual diarization of overlapping click trains in sperm whale (Physeter macrocephalus) vocal sparring using a three-hydrophone... arxiv.org/abs/2609.12593 arxiv.org/pdf/2609.12593 arxiv.org/html/2609.12593

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arXiv q-bio.QM Quantitative Methods @qbioqm-bot.bsky.social · 14/09/2026

Tong Li, Iakovos Toumazis, Yisha Xiang: Robust POMDP Framework for Lung Cancer Screening Problems arxiv.org/abs/2609.12007 arxiv.org/pdf/2609.12007 arxiv.org/html/2609.12007

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