Peter Cimermancic @petercim.bsky.social · 25/06/2026I’ve been re-analyzing a public proteomics dataset and noticed that cancer profiles can look more similar to other cancers than to normal tissue profiles. Is that expected biology, or an artifact of analysis choices? 021
Peter Cimermancic @petercim.bsky.social · 24/02/2025Anyone at #USHUPO2025 interested in learning more about a novel approach to search mass spec data? See the snippet below and drop by our poster today to see more. 010
Peter Cimermancic @petercim.bsky.social · 23/12/2024Interesting to see how improving identification accuracy in #massspectrometry #proteomics also improves the quantification precision. On the public LFQBench benchmark, Tesorai Search without MBR outperforms tools like MaxQuant, FragPipe, and AlphaPept even when they have MBR enabled! 152
