Sign in

Pedro Ribeiro

@pedroribeiro.bsky.social
460 followers 116 following 7 posts

Data Scientist @ Mass General, Beth Israel, Broad | Clinical Research | Automated Interpretable Machine Learning, Evolutionary Algorithms | UPenn MSE Bioengineering, Oberlin BA Computer Science

PostsRepliesMedia
Pedro Ribeiro @pedroribeiro.bsky.social · 06/04/2026
New paper is out! "A biology-based quality-diversity algorithm for drug repurposing in Alzheimer’s disease using automated machine learning" An exciting project combining knowledge graphs, graph neural networks, evolutionary algorithms, MAP-Elites link.springer.com/article/10.1...
link.springer.com
A biology-based quality-diversity algorithm for drug repurposing in Alzheimer’s disease using automated machine learning - BioData Mining
BioData Mining - Alzheimer’s disease (AD) remains a major therapeutic challenge, characterized by high clinical trial failure rates and limited efficacy of current treatments. Drug...
010
Pedro Ribeiro @pedroribeiro.bsky.social · 28/08/2025
Our automl package TPOT has just reached 10k stars on github! This places TPOT among the top 3,000 highest-ranked repositories, coming in at rank 2,956. github.com/EpistasisLab... #automl #machinelearning #ai #datascience
lnkd.in
LinkedIn
This link will take you to a page that’s not on LinkedIn
030
Pedro Ribeiro @pedroribeiro.bsky.social · 15/07/2025
The tree-based pipeline optimization tool: Tackling biomedical research problems with genetic programming and automated machine learning www.sciencedirect.com/science/arti...
sciencedirect.com
The tree-based pipeline optimization tool: Tackling biomedical research problems with genetic programming and automated machine learning
The tree-based pipeline optimization tool (TPOT) is one of the earliest automated machine learning (ML) frameworks developed for optimizing ML pipelin…
000
Reposted by Pedro Ribeiro
Jason Moore @moorejh.bsky.social · 22/01/2025
TPOT = Tree-based Pipeline Optimization Tool. Consider TPOT your Data Science Assistant. TPOT is an open-source Automated Machine Learning (AutoML) tool that optimizes ML pipelines using genetic programming github.com/EpistasisLab... #tpot #automl #machinelearning #datascience
github.com
GitHub - EpistasisLab/tpot: A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.
A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming. - EpistasisLab/tpot
2229
Pedro Ribeiro @pedroribeiro.bsky.social · 30/11/2024
The TPOT2 AutoML package I developed at Cedars-Sinai has received another citation in the paper: "Biologically Enhanced Machine Learning Model to Uncover Novel Gene-Drug Targets for Alzheimer's Disease." Excited to see my project being used in research!
050
Pedro Ribeiro @pedroribeiro.bsky.social · 29/11/2024
For the past three years, I've had the privilege of working at Cedars-Sinai's Department of Computational Biomedicine, where I was one of the first employees. I'm grateful for the opportunity to contribute to a growing department. A highlight was leading the development of TPOT2.
180