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John Parkinson

@parkinsonje.bsky.social
616 followers 107 following 13 posts

Coral reef ecologist, scuba diver, Jurassic Park enthusiast. Assistant Professor at the University of South Florida. Posts are my own.

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John Parkinson @parkinsonje.bsky.social · 22/12/2025
New paper on using #coral nurseries as experimental units for studying host x symbiont genotype interactions. Congrats to recent PhD student (now Dr.) Matt Gamache! @cmarinescience.bsky.social rdcu.be/eVA2C
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John Parkinson @parkinsonje.bsky.social · 23/10/2025
Some additional coverage of our report on the major loss of acroporid corals in the Florida Keys by @cbsnews.com: www.cbsnews.com/news/florida...
cbsnews.com
Marine heat wave caused key part of Florida's coral reef to become "functionally extinct," report says
A record 2023 heat wave all but eradicated two species of coral that historically served as the backbone of Florida's reefs, researchers said in a new report.
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Dr. Carly Kenkel @drcarl.bsky.social · 23/10/2025
Results I'm sad to share but must be told - branching coral are now functionally extinct in Florida - to learn more check out the full study www.science.org/doi/10.1126/... and our personal summary theconversation.com/2-iconic-cor...
science.org
Heat-driven functional extinction of Caribbean Acropora corals from Florida’s Coral Reef
In 2023, a record-setting marine heat wave triggered the ninth mass coral bleaching event on Florida’s Coral Reef (FCR). We examined spatial patterns of heat exposure along the ~560-kilometer length o...
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Meg Daly @megdaly.bsky.social · 23/10/2025
This is an INCREDIBLE advance in our understanding of coral diversification. 🪸🎉 Fantastic new work led by @claudiavaga.bsky.social www.nature.com/articles/s41...
nature.com
A global coral phylogeny reveals resilience and vulnerability through deep time - Nature
The most recent common ancestor of the stony coral Scleractinia dates to about 460 million years ago and was probably a solitary, heterotrophic and free-living organism.
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John Parkinson @parkinsonje.bsky.social · 29/08/2025
USF media produced a nice article about our lab! Many thanks to those who put it together, and of course to my students who make the research possible. www.usf.edu/arts-science...
usf.edu
In the Parkinson Lab at USF, saving Florida's Coral Reef is a top priority
University of South Florida
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Iliana Baums @ibaums.bsky.social · 25/07/2025
Proactive assisted gene flow for Caribbean corals in an era of rapid coral reef decline | Science www.science.org/doi/10.1126/...
science.org
Proactive assisted gene flow for Caribbean corals in an era of rapid coral reef decline
Regulatory action could facilitate cross-border efforts to retain ecosystem function
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Raúl González-Pech (he/him) @raulgoch.bsky.social · 11/06/2025
Stoke to announce that I will be joining the Department of Biology @txst.edu this coming Fall semester as an Assistant Professor! Looking for grad students with interests in #Symbiodiniaceae, #corals 🪸, microbial #symbiosis 🦠, comparative #genomics 🧬 and #phylogenomics soon. Feel free to reach out!
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Terry Hughes @profterryhughes.bsky.social · 02/05/2025
After months of official silence, mass mortality of corals in Western Australia - since January - is finally getting attention. www.watoday.com.au/national/wes...
watoday.com.au
Unprecedented heatwave causes mass bleaching of Ningaloo, Kimberley reefs
Environment Minister Matthew Swinbourn raised the issue in parliament, stating the scale and duration of a marine heatwave had led to mass bleaching.
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Microbiology Society @microbiologysociety.org · 11/04/2025
Our "Guide to communicating microbiomes in the media", created in collaboration @lindsaybroadbent.bsky.social aims to help navigate the complexities of communicating microbiome research. Click the link in our bio to read and download the guide.
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Microbiology Society @microbiologysociety.org · 27/03/2025
Change is coming to microbiology publishing. A new space for authoritative reviews and forward-looking perspectives is on the horizon. Be the first to hear the full announcement at #Microbio25.
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John Parkinson @parkinsonje.bsky.social · 06/03/2025
Congrats to Parkinson lab PhD students Lauren & Matt (and former postdoc Raul!) and the whole team for putting together this nice perspective on efforts to incorporate microbiome analyses into conservation efforts.
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Misha Matz @heatshok.bsky.social · 28/02/2025
Florida elkhorn corals need active genetic help to handle climate change, they cannot do it on their own. The risk is far less than the risk of doing nothing. 🌏🧪https://doi.org/10.5281/zenodo.14920439 @coralconsortium.bsky.social
doi.org
Safeguarding Florida's Coral Reefs: The Urgency of Assisted Gene Flow for Elkhorn Coral Conservation
The devastating 2023 heatwave is the latest in a series of disasters that has decimated the Florida population of elkhorn coral (Acropora palmata) to a critically low level, pushing this species to a ...
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John Parkinson @parkinsonje.bsky.social · 17/02/2025
Congrats to Peter Fisichella for presenting his undergraduate research on #Symbiodiniaceae thermal tolerance this weekend at the #Florida Undergraduate Research Conference! (hosted this year in Tampa @ USF) @usouthflorida.bsky.social hflorida.bsky.social
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John Parkinson @parkinsonje.bsky.social · 05/02/2025
I don't come on social media often anymore, but I can't resist when there's a new #JurassicPark trailer to share. www.youtube.com/watch?v=jan5...
youtube.com
Jurassic World Rebirth | Official Trailer
YouTube video by Universal Pictures
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Christian R Voolstra @reefgenomics.bsky.social · 19/11/2024
PSA: pre-print of Symbiodiniaceae chapter for the upcoming coral microbiome book; was super fun to write w/ @parkinsonje.bsky.social & Raquel Peixoto; I find this very accessible & hopefully fun to read, have a look & stay tuned for the upcoming book doi.org/10.31219/osf... @unikonstanz.bsky.social
osf.io
OSF
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John Parkinson @parkinsonje.bsky.social · 07/02/2024
A very helpful guide!
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John Parkinson @parkinsonje.bsky.social · 04/01/2024
Caribbean Acropora genomes/maps now available. Congrats @ibaums.bsky.social et al.! www.biorxiv.org/content/10.1...
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John Parkinson @parkinsonje.bsky.social · 03/01/2024
Reading: Novel plastid genome characteristics in Fugacium kawagutii and the trend of accelerated evolution of plastid proteins in dinoflagellates doi.org/10.1093/gbe/...
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John Parkinson @parkinsonje.bsky.social · 28/12/2023
Great artwork! (and tools) journals.plos.org/plosbiology/...
journals.plos.org
Openly available illustrations as tools to describe eukaryotic microbial diversity
The microbial world is diverse and critically important to understanding evolution and global ecology, but we lack teaching and communications resources. This Essay provides a series of technical diag...
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Nils Rädecker @radecker.bsky.social · 13/12/2023
Take a deep dive into the world of cassiosomes and their photosymbionts with @gaelletoullec.bsky.social’s first PhD paper. These autonomous cell structures of rhizostome jellyfish could be exciting model systems to study cnidarian symbioses! 🧫🪸🔬 doi.org/10.1128/msph... @cpogoreutz.bsky.social
The Cassiosomes of Cassiopea- stinging cell structures fueled by algal symbionts.
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John Parkinson @parkinsonje.bsky.social · 07/11/2023
We're hiring! The University of South Florida, Tampa is searching for a Marine/Coastal Biologist (assistant professor / tenure track). Come join a great department! Details: bit.ly/usf_marine_bio_search
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Dr. Carly Kenkel @drcarl.bsky.social · 18/10/2023
Hot off the presses at Global Change Bio - Yingqi Zhang's 3rd chapter - Performance of Orbicella faveolata larval cohorts does not align with previously observed thermal tolerance of adult source populations doi.org/10.1111/gcb....
Pic courtesy of NOAA/Allyson DeMerlis
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John Parkinson @parkinsonje.bsky.social · 17/10/2023
Come help us with an expansive coral GWAS! Cool data, great team, and I hear Los Angeles is fun.
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