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Michael Schubert

@ms01.bsky.social

119 followers 211 following 7 posts

Combining computational biology 🧬💻 with outdoor sports in 📍 Innsbruck, Austria • Previously Netherlands Cancer Institute, PhD at EMBL-EBI/Cambridge • 🔗 github.com/mschubert

Posts Replies Media

Michael Schubert @ms01.bsky.social · 26/01/2026

📣 We're #hiring a #PhD student! - Innsbruck - computational - 3 years - fully funded - Deadline: Feb 11th 💼 Project: scRNA-seq analysis on in-house developed cancer atlases 🔍 Looking for: experience in cancer and R/Python 🗓️ Until Feb 11th to bewerbung@i-med.ac.at quoting MEDI-20369

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Michael Schubert @ms01.bsky.social · 15/01/2026

I can confirm the experience: Using Codex for areas with little experience, LLM code assistants are a game changer. But even in areas close to my expertise, they speed up drafting a lot. For now, I am reviewing changes line by line in either case.

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Michael Schubert @ms01.bsky.social · 12/02/2025

I just released version 0.9.7 of the #clustermq #rstats package: mschubert.github.io/clustermq/ _Run your code on HPC or via SSH via one line of code_ Please check it out; feedback is welcome!

mschubert.github.io

Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque)

Evaluate arbitrary function calls using workers on HPC schedulers in single line of code. All processing is done on the network without accessing the file system. Remote schedulers are supported via S...

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Michael Schubert @ms01.bsky.social · 28/01/2025

New paper out! 🚨🥳 We thought that passenger gene amplifications can drive cancer vulnerabilities and show that RBM14 does so via cGAS-STING modulation 👇 @vrendo.bsky.social @bendavidlab.bsky.social @rameenberoukhim.bsky.social @foijer-lab.bsky.social

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Michael Schubert @ms01.bsky.social · 11/01/2025

Hello Bluesky.

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