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Moldyn Freiburg

@moldynfr.bsky.social
65 followers 37 following 4 posts

We are the Stock research group from the Institute of Physics of the University of Freiburg. Interested in biological physics, model building and data analysis.

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Moldyn Freiburg @moldynfr.bsky.social · 13/12/2024
Newest work from Sofia, Franziska and Gerhard: an assessment how far state models similar to MSMs can describe non-Markovian dynamics. Out now as preprint under: arxiv.org/abs/2412.08660 #compchem
arxiv.org
Markov-type state models to describe non-Markovian dynamics
When clustering molecular dynamics (MD) trajectories into a few metastable conformational states, the Markov state models (MSMs) assumption of timescale separation between fast intrastate fluctuations...
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Reposted by Moldyn Freiburg
Steffen Wolf @herrflow.bsky.social · 06/12/2024
Come to our CECAM workshop in March 2025 at Lausanne!
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Moldyn Freiburg @moldynfr.bsky.social · 03/12/2024
Newest work of our group: Ahmed, Emanuel and Gerhard report on how allosteric information is transmitted via coupling of contact clusters within proteins. #compchem #allostery #biophysics #ai pubs.acs.org/doi/10.1021/...
pubs.acs.org
Allosteric Communication Mediated by Protein Contact Clusters: A Dynamical Model
Describing the puzzling phenomenon of long-range communication between distant protein sites, allostery is of paramount importance in biomolecular regulation and signal transduction. It is commonly as...
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Moldyn Freiburg @moldynfr.bsky.social · 28/11/2024
...and we're here now, too! Looking forward to post about science and general stuff from now on.
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