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micro-manager.bsky.social

@micro-manager.bsky.social
93 followers 2 following 4 posts
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micro-manager.bsky.social @micro-manager.bsky.social · 12/06/2026
RGB images have always been an afterthought in Micro-Manager. No more, there now is full support, including White Balancing: nicost.github.io/microscope-t...
Screenshot if Micro-Manager software displaying an RGB microscope image.
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micro-manager.bsky.social @micro-manager.bsky.social · 21/05/2026
Development of Micro-Manager code has accelerated quite a bit with availability of the new generation of AI coding tools (and the need to provide functionality for microscopes in our core at UCSF). Follow these developments here: nicost.github.io/microscope-t...
nicost.github.io
Half a year of progress in Micro-Manager development
Faster progress on Micro-Manager development thanks to new AI coding tools
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Reposted by @micro-manager.bsky.social
Nico Stuurman @nicostuurman.bsky.social · 21/12/2025
One of the difficulties in developing code for microscopes is to get access to the equipment. So, wouldn't it be nice to have emulators? Turns out that AI is really good at converting documentation into an emulator: nicost.github.io/microscope-t...
nicost.github.io
Firmware Emulators
title: “Firmware Emulators for Microscope Devices” author: Nico Stuurman date: 2025-12-21 —
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micro-manager.bsky.social @micro-manager.bsky.social · 10/05/2025
Some Micro-Manager device adapters are not included in the installer. That can cause problems when the device API changes. When the device adapter vendor does not release a new version you can try the following work-around: nicost.github.io/microscope-t...
nicost.github.io
Using a Decompiler to change the MM Device Interface Version
Some companies (like Cairn and Mightex, but there are others) wrote device adapters for their equipment but did not share the source code with the Micro-Manager team. Therefore, you need to ask these ...
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micro-manager.bsky.social @micro-manager.bsky.social · 29/03/2025
Just had the pleasure to experiment with a camera targeting the astronomy market, but offering great value for microscopy. Cooled, low noise (<1.5 e read-noise), high QE cameras that work with Micro-Manager can be bought for ~$1k: nicost.github.io/microscope-t...
nicost.github.io
PlayerOne cooled CMOS camera
The Sony STARVIS and STARVIS2 image sensors are back-illuminated, have high QE and low readnoise (where STARVIS2 increases full well depth over STARVIS). Even though these sensors are marketed towards...
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