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mariuslange.bsky.social @mariuslange.bsky.social · 28/03/2025

Happy to share CellAnnotator, a lightweight Python package to query OpenAI models for initial cell type annotations: github.com/quadbio/cell... Inspired by ideas in www.nature.com/articles/s41... and github.com/VPetukhov/GP..., implemented as an scVerse ecosystem package with docs and tutorials.

github.com

GitHub - quadbio/cell-annotator: Automatically annotate cell types, consistently across samples.

Automatically annotate cell types, consistently across samples. - quadbio/cell-annotator

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mariuslange.bsky.social @mariuslange.bsky.social · 23/01/2025

Excited to see moscot out in Nature! This was a great collaborative effort, thanks to everyone involved for making this project a success!

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mariuslange.bsky.social @mariuslange.bsky.social · 28/11/2024

On my first day of joining bluesky, our CellRank project is officially awarded the Helmholtz Software award for scientific originality! This is a great honor for the CellRank dev team, including Philipp Weiler, Michal Klein, and myself. Check out cellrank.org to learn more.

cellrank.org

cellrank documentationContentsMenuExpandLight modeDark modeAuto light/dark, in light modeAuto light/dark, in dark mode

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