Today I was working with this fantastic tool called GetOrganelle. I prepared a small tutorial to extract a mitochondrial genome from WGS.
github.com/luchoamador/...
github.com
GitHub - luchoamador/Whole-Genome-2-Mitochondrial-genome: Bash code to show how to extract and assemble complete mitochondrial genomes from whole-genome sequencing (WGS) data.
Bash code to show how to extract and assemble complete mitochondrial genomes from whole-genome sequencing (WGS) data. - luchoamador/Whole-Genome-2-Mitochondrial-genome