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Larissa Ferguson

@lariferg.bsky.social
27 followers 22 following 0 posts

Neuroscience, structural bioinformatics, GPCR signalling

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Reposted by Larissa Ferguson
Molecular Cell @cp-molcell.bsky.social · 09/08/2026
DeorphaNN: Virtual screening of GPCR peptide agonists using AlphaFold-predicted active-state complexes and deep learning embeddings
dlvr.it
DeorphaNN: Virtual screening of GPCR peptide agonists using AlphaFold-predicted active-state complexes and deep learning embeddings
Ferguson et al. develop DeorphaNN, a graph neural network integrating active-state GPCR-peptide structural predictions, interatomic interactions, and deep learning embeddings to prioritize putative peptide agonists for experimental screening. DeorphaNN improves agonist prioritization over AlphaFold and general protein-protein interaction models.
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Reposted by Larissa Ferguson
Denise Walker @denisewalker.bsky.social · 21/03/2025
The latest from Schafer lab: @lariferg.bsky.social, collaborating with Beets lab, uses Alphafold multimer and deep learning to predict GPCR peptide ligands www.biorxiv.org/content/10.1...
biorxiv.org
DeorphaNN: Virtual screening of GPCR peptide agonists using AlphaFold-predicted active state complexes and deep learning embeddings
G protein-coupled receptors (GPCRs) are important cell surface receptors involved in numerous physiological processes. Although peptides are the cognate ligands for many of these receptors, identifyin...
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